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MS016762 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016762
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSel1-like protein
Genome locationscaffold563:713051..713909
RNA-Seq ExpressionMS016762
SyntenyMS016762
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006597 - Sel1-like repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]1.2e-4898Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGL+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_011651845.1 uncharacterized protein LOC101206121 [Cucumis sativus]3.0e-4796Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISG TE L+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]1.9e-49100Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_022934323.1 uncharacterized protein LOC111441521 [Cucurbita moschata]2.1e-4897Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGLSRVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]4.3e-4693Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTE L+RVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD+T DS
Subjt:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

TrEMBL top hitse value%identityAlignment
A0A1S3B5I4 uncharacterized protein LOC1034862545.9e-4998Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGL+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A5D3DNP0 Sel1-like protein5.9e-4998Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGL+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A6J1DSS4 uncharacterized protein LOC1110240629.1e-50100Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A6J1F7C2 uncharacterized protein LOC1114415211.0e-4897Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGLSRVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A6J1J881 uncharacterized protein LOC1114821711.0e-4897Show/hide
Query:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGLSRVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)7.4e-3682.93Show/hide
Query:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
        VPLS VVSDC KRWFKDTL+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR RSSVWKV DK PGYNASDSDS+
Subjt:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD

AT5G05360.1 unknown protein2.2e-3569.57Show/hide
Query:  SGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD
        + G++ ++RVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PGYNASDSDS+D
Subjt:  SGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD

AT5G05360.2 unknown protein5.5e-3166.67Show/hide
Query:  SGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
        + G++ ++RVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PG N
Subjt:  SGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCGGAGGGACAGAGGGCCTGAGTCGCGTTCCTTTATCAGAAGTTGTTTCGGATTGCGTCAAACGATGGTTTAAAGACACTCTGAAGGAGGCCAAAGCCGG
GGACATCAATATGCAGGTCTTGGTGGGTCAAATGTACTATAGCGGTTATGGGGTTCCAAGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCGGTTTGGAAAGTTAGTGATAAACATCCAGGTTATAATGCGAGTGATTCAGATTCAGATGACTTGACTCGTGATTCT
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTAGCGGAGGGACAGAGGGCCTGAGTCGCGTTCCTTTATCAGAAGTTGTTTCGGATTGCGTCAAACGATGGTTTAAAGACACTCTGAAGGAGGCCAAAGCCGG
GGACATCAATATGCAGGTCTTGGTGGGTCAAATGTACTATAGCGGTTATGGGGTTCCAAGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCGGTTTGGAAAGTTAGTGATAAACATCCAGGTTATAATGCGAGTGATTCAGATTCAGATGACTTGACTCGTGATTCT
Protein sequenceShow/hide protein sequence
MEISGGTEGLSRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTRDS