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MS016789 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016789
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionABC transporter B family member 26, chloroplastic-like
Genome locationscaffold9_1:29082..29396
RNA-Seq ExpressionMS016789
SyntenyMS016789
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133689.1 ABC transporter B family member 26, chloroplastic-like [Momordica charantia]1.2e-4386.67Show/hide
Query:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGGS
        MDIA R L ISFPPFFPP  FSPRSNSRSSGSKLTMK QFPIIV SSF SNEFKFYRHRMRNSSLILRYMV EN+GNGDDNFKSFGHWV VS S FP GS
Subjt:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGGS

Query:  WWNLD
        WWNLD
Subjt:  WWNLD

XP_038891218.1 ABC transporter B family member 26, chloroplastic-like isoform X1 [Benincasa hispida]1.9e-2863.55Show/hide
Query:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGG-
        MDIA +NL  SF P+FPP EF+P      SG KLT KLQFPII+SS+  S EFK +R+R+RNSSL+L+YMV EN+GNGD+ FKSFGH +R+S S F GG 
Subjt:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGG-

Query:  -SWWNLD
         SWWNLD
Subjt:  -SWWNLD

XP_038891220.1 ABC transporter B family member 26, chloroplastic-like isoform X2 [Benincasa hispida]1.9e-2863.55Show/hide
Query:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGG-
        MDIA +NL  SF P+FPP EF+P      SG KLT KLQFPII+SS+  S EFK +R+R+RNSSL+L+YMV EN+GNGD+ FKSFGH +R+S S F GG 
Subjt:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGG-

Query:  -SWWNLD
         SWWNLD
Subjt:  -SWWNLD

XP_038891221.1 ABC transporter B family member 26, chloroplastic-like isoform X3 [Benincasa hispida]1.9e-2863.55Show/hide
Query:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGG-
        MDIA +NL  SF P+FPP EF+P      SG KLT KLQFPII+SS+  S EFK +R+R+RNSSL+L+YMV EN+GNGD+ FKSFGH +R+S S F GG 
Subjt:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGG-

Query:  -SWWNLD
         SWWNLD
Subjt:  -SWWNLD

XP_038891222.1 ABC transporter B family member 26, chloroplastic-like isoform X4 [Benincasa hispida]1.9e-2863.55Show/hide
Query:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGG-
        MDIA +NL  SF P+FPP EF+P      SG KLT KLQFPII+SS+  S EFK +R+R+RNSSL+L+YMV EN+GNGD+ FKSFGH +R+S S F GG 
Subjt:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGG-

Query:  -SWWNLD
         SWWNLD
Subjt:  -SWWNLD

TrEMBL top hitse value%identityAlignment
A0A0A0KR30 Uncharacterized protein1.9e-2658.49Show/hide
Query:  DIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPG--G
        DIA +NL  SFPP+ PP EF+P     +SG KLT KLQFPI++S++   NEFK   +R+RNSSL+ +YM+ E++GNGD+NF+SFGHW+ VS S FPG   
Subjt:  DIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPG--G

Query:  SWWNLD
        SWWNLD
Subjt:  SWWNLD

A0A1S3C888 ABC transporter B family member 26, chloroplastic-like1.9e-2660.38Show/hide
Query:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPG--
        MDIA +NL  SFPP+ PP EFSP     +SG KLT KL FPI++S++   NEFK   +R+RNSSL+L+Y   EN+GNGD+NFKSFGHWV V  S FPG  
Subjt:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPG--

Query:  GSWWNL
         SWWNL
Subjt:  GSWWNL

A0A5A7T462 ABC transporter B family member 261.9e-2660.38Show/hide
Query:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPG--
        MDIA +NL  SFPP+ PP EFSP     +SG KLT KL FPI++S++   NEFK   +R+RNSSL+L+Y   EN+GNGD+NFKSFGHWV V  S FPG  
Subjt:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPG--

Query:  GSWWNL
         SWWNL
Subjt:  GSWWNL

A0A5D3BV94 ABC transporter B family member 261.9e-2660.38Show/hide
Query:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPG--
        MDIA +NL  SFPP+ PP EFSP     +SG KLT KL FPI++S++   NEFK   +R+RNSSL+L+Y   EN+GNGD+NFKSFGHWV V  S FPG  
Subjt:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPG--

Query:  GSWWNL
         SWWNL
Subjt:  GSWWNL

A0A6J1BWQ8 ABC transporter B family member 26, chloroplastic-like6.0e-4486.67Show/hide
Query:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGGS
        MDIA R L ISFPPFFPP  FSPRSNSRSSGSKLTMK QFPIIV SSF SNEFKFYRHRMRNSSLILRYMV EN+GNGDDNFKSFGHWV VS S FP GS
Subjt:  MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGGS

Query:  WWNLD
        WWNLD
Subjt:  WWNLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTGCCAACCGGAATCTTTCTATTTCCTTTCCTCCGTTTTTCCCGCCGGTGGAATTTTCTCCGAGATCAAACTCCCGGTCTTCTGGTTCCAAGCTCACGATGAA
GCTTCAGTTCCCGATTATCGTCTCTAGCAGTTTTAGTAGTAACGAGTTTAAATTCTATCGCCACCGAATGCGAAATTCTTCCTTGATTCTTCGATATATGGTGACCGAAA
ATGAGGGAAATGGAGACGATAATTTCAAGTCATTTGGACATTGGGTTCGTGTTTCCTGTTCGTCGTTTCCTGGTGGCAGTTGGTGGAATTTAGAT
mRNA sequenceShow/hide mRNA sequence
ATGGACATTGCCAACCGGAATCTTTCTATTTCCTTTCCTCCGTTTTTCCCGCCGGTGGAATTTTCTCCGAGATCAAACTCCCGGTCTTCTGGTTCCAAGCTCACGATGAA
GCTTCAGTTCCCGATTATCGTCTCTAGCAGTTTTAGTAGTAACGAGTTTAAATTCTATCGCCACCGAATGCGAAATTCTTCCTTGATTCTTCGATATATGGTGACCGAAA
ATGAGGGAAATGGAGACGATAATTTCAAGTCATTTGGACATTGGGTTCGTGTTTCCTGTTCGTCGTTTCCTGGTGGCAGTTGGTGGAATTTAGAT
Protein sequenceShow/hide protein sequence
MDIANRNLSISFPPFFPPVEFSPRSNSRSSGSKLTMKLQFPIIVSSSFSSNEFKFYRHRMRNSSLILRYMVTENEGNGDDNFKSFGHWVRVSCSSFPGGSWWNLD