; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016797 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016797
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold9_1:86719..87408
RNA-Seq ExpressionMS016797
SyntenyMS016797
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598412.1 E3 ubiquitin ligase rnf-5, partial [Cucurbita argyrosperma subsp. sororia]8.0e-12896.09Show/hide
Query:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
        MASGFGESTSRQPQ PS SDNN DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKA+IEEQKLVPLYGRGKTSTDPRSKSIPGI
Subjt:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI

Query:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
        NIPNRPAGQRPEAAGPPPEPN FPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA  PYGFPNMFHGSHGHAHGYY
Subjt:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY

Query:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
        HHLRQGQQDYYLKRLL+ IGFCVLLALIWQ
Subjt:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ

XP_004152714.1 E3 ubiquitin ligase rnf-5 [Cucumis sativus]4.7e-12896.96Show/hide
Query:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
        M SGFGESTSRQPQSPSCSDNN DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
Subjt:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI

Query:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
        NIPNRPAGQRPEAAGPPPEPN FPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA FPYGFPNMFHGSHGHAHGYY
Subjt:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY

Query:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
        H LRQGQQDYYLKRLL LIGF VLLALIWQ
Subjt:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ

XP_022144378.1 E3 ubiquitin-protein ligase RNF185 [Momordica charantia]9.7e-134100Show/hide
Query:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
        MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
Subjt:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI

Query:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
        NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
Subjt:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY

Query:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
        HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
Subjt:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ

XP_023547002.1 E3 ubiquitin-protein ligase RNF185-like [Cucurbita pepo subsp. pepo]8.0e-12896.09Show/hide
Query:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
        MASGFGESTSRQPQ PS SDNN DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKA+IEEQKLVPLYGRGKTSTDPRSKSIPGI
Subjt:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI

Query:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
        NIPNRPAGQRPEAAGPPPEPN FPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA  PYGFPNMFHGSHGHAHGYY
Subjt:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY

Query:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
        HHLRQGQQDYYLKRLL+ IGFCVLLALIWQ
Subjt:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ

XP_038884023.1 E3 ubiquitin ligase rnf-5 [Benincasa hispida]1.1e-12997.39Show/hide
Query:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
        MASGFGESTSRQPQSPSCSDNN DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
Subjt:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI

Query:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
        NIPNRPAGQRPEAAGPPPEPN FPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA FPYGFPNMFHGSHGHAHGYY
Subjt:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY

Query:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
        H LRQGQQDYYLKRLL+ IGFCVLLALIWQ
Subjt:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ

TrEMBL top hitse value%identityAlignment
A0A0A0LLD2 RING-type domain-containing protein2.3e-12896.96Show/hide
Query:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
        M SGFGESTSRQPQSPSCSDNN DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
Subjt:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI

Query:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
        NIPNRPAGQRPEAAGPPPEPN FPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA FPYGFPNMFHGSHGHAHGYY
Subjt:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY

Query:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
        H LRQGQQDYYLKRLL LIGF VLLALIWQ
Subjt:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ

A0A1S3BBQ8 RING finger protein 55.0e-12896.52Show/hide
Query:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
        MASG GESTSRQPQSPSCSDNN DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSK IPGI
Subjt:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI

Query:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
        NIPNRPAGQRPEAAGPPPEPN FPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA FPYGFPNMFHGSHGHAHGYY
Subjt:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY

Query:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
        H LRQGQQDYYLKRLL+LIGF VLLALIWQ
Subjt:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ

A0A5A7VHN4 RING finger protein 55.0e-12896.52Show/hide
Query:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
        MASG GESTSRQPQSPSCSDNN DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSK IPGI
Subjt:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI

Query:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
        NIPNRPAGQRPEAAGPPPEPN FPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA FPYGFPNMFHGSHGHAHGYY
Subjt:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY

Query:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
        H LRQGQQDYYLKRLL+LIGF VLLALIWQ
Subjt:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ

A0A6J1CT42 E3 ubiquitin-protein ligase RNF1854.7e-134100Show/hide
Query:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
        MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
Subjt:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI

Query:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
        NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
Subjt:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY

Query:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
        HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
Subjt:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ

A0A6J1HCN0 E3 ubiquitin-protein ligase RNF185-like8.6e-12895.65Show/hide
Query:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI
        MASGFGESTSRQPQ PS SDNN DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKA+IEEQKLVPLYGRGKTSTDPRSKSIPGI
Subjt:  MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGI

Query:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY
        NIPNRP+GQRPEAAGPPPEPN FPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA  PYGFPNMFHGSHGHAHGYY
Subjt:  NIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYY

Query:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ
        HHLRQGQQDYYLKRLL+ IGFCVLLALIWQ
Subjt:  HHLRQGQQDYYLKRLLMLIGFCVLLALIWQ

SwissProt top hitse value%identityAlignment
Q09463 E3 ubiquitin ligase rnf-52.5e-3137.19Show/hide
Query:  TSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAG
        T    + P+ S N  +++ FECNICLD A+D +V+LCGHLFCWPCL +WL    + Q CPVCK+ I+  K+VP+YGRG  S+DPR K      +P RP G
Subjt:  TSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAG

Query:  QRPEAAGPPPEPNHFPHNGFGFMGG-LGGFAPMASTRFGNFTLSAAF---------GGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHG
        QR E     P P  F    +G  GG +GG  P     FG  T++  F          G+ P  F     G  +     AG G   G      G+H H HG
Subjt:  QRPEAAGPPPEPNHFPHNGFGFMGG-LGGFAPMASTRFGNFTLSAAF---------GGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHG

Query:  YYH-----------HLRQGQQDYYLKRLLMLIGFCVLLALIW
        + H             R  Q++ YL  +   IGF +L  L++
Subjt:  YYH-----------HLRQGQQDYYLKRLLMLIGFCVLLALIW

Q5RFK9 E3 ubiquitin-protein ligase RNF1852.7e-2549.65Show/hide
Query:  GESTSRQPQS-----PSCSDNNS-----DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKT-STDPRS
        G S S  P++     PS S N +       S FECNICLD A+D +++LCGHLFCWPCL++WL    + Q CPVCKA I   K++PLYGRG T   DPR 
Subjt:  GESTSRQPQS-----PSCSDNNS-----DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKT-STDPRS

Query:  KSIPGINIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGF
        K+      P RP GQRPE     PE N     GFGF  G GGF
Subjt:  KSIPGINIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGF

Q5ZIR9 E3 ubiquitin-protein ligase RNF1851.4e-2651.54Show/hide
Query:  TSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKT-STDPRSKSIPGINIPNRPA
        TS    S    DN +  + FECNICLD A+D +++LCGHLFCWPCL++WL    + Q CPVCKA I   K++PLYGRG T   DPR K+      P RP 
Subjt:  TSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKT-STDPRSKSIPGINIPNRPA

Query:  GQRPEAAGPPPEPNHFPHNGFGFMGGLGGF
        GQRPE     PE N     GFGF  G GGF
Subjt:  GQRPEAAGPPPEPNHFPHNGFGFMGGLGGF

Q91YT2 E3 ubiquitin-protein ligase RNF1853.5e-2551.61Show/hide
Query:  SPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKT-STDPRSKSIPGINIPNRPAGQRPEA
        S    ++    S FECNICLD A+D +++LCGHLFCWPCL++WL    + Q CPVCKA I   K++PLYGRG T   DPR K+      P RP GQRPE 
Subjt:  SPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKT-STDPRSKSIPGINIPNRPAGQRPEA

Query:  AGPPPEPNHFPHNGFGFMGGLGGF
            PE N     GFGF  G GGF
Subjt:  AGPPPEPNHFPHNGFGFMGGLGGF

Q96GF1 E3 ubiquitin-protein ligase RNF1852.7e-2549.65Show/hide
Query:  GESTSRQPQS-----PSCSDNNS-----DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKT-STDPRS
        G S S  P++     PS S N +       S FECNICLD A+D +++LCGHLFCWPCL++WL    + Q CPVCKA I   K++PLYGRG T   DPR 
Subjt:  GESTSRQPQS-----PSCSDNNS-----DASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKT-STDPRS

Query:  KSIPGINIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGF
        K+      P RP GQRPE     PE N     GFGF  G GGF
Subjt:  KSIPGINIPNRPAGQRPEAAGPPPEPNHFPHNGFGFMGGLGGF

Arabidopsis top hitse value%identityAlignment
AT1G19310.1 RING/U-box superfamily protein6.0e-8167.27Show/hide
Query:  PSCSD----NNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRP
        PSCS     NN+D+SNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLH+HS  ++CPVCKA+IEE +LVPLYGRGK+S DPRSKSIPG+ +PNRP+GQRP
Subjt:  PSCSD----NNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRP

Query:  EAAGPPPEPNHFPHNGFGFMGGLGGF-APMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA--GFPYGFPNMFHGSHGHAHGYYHHL-RQGQ
        E A  PP+PNH   +  GF G +GGF APMAS RFGN TLSAAFGGL+PSLFN   HG+ D +MYGA A  GFP+GF N FHG H H H Y  H  RQGQ
Subjt:  EAAGPPPEPNHFPHNGFGFMGGLGGF-APMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGA--GFPYGFPNMFHGSHGHAHGYYHHL-RQGQ

Query:  QDYYLKRLLMLIGFCVLLAL
        QD++L+ LL+++   V+ +L
Subjt:  QDYYLKRLLMLIGFCVLLAL

AT1G74990.1 RING/U-box superfamily protein1.3e-3857.14Show/hide
Query:  SDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPP
        ++ +  ++NF CNICL+LA++PIVTLCGHLFCWPCLYKWLH HS    CPVCKA+++E  LVPLYG GK S+DPRSK   G+ +PNRPA  R E A P  
Subjt:  SDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPP

Query:  EPNHFPHNGFGFMGGLGGFAPM-ASTRFGNFTL
        E     H+G  F GG   FA M    RF NF L
Subjt:  EPNHFPHNGFGFMGGLGGFAPM-ASTRFGNFTL

AT2G23780.1 RING/U-box superfamily protein2.0e-6856.96Show/hide
Query:  GESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNR
        GES++    S S +D N    +FECNIC +LAQDPIVTLCGHLFCWPCLY+WLH HSH QECPVCKA++++ KLVPLYGRGK  TDPRSK  PG+ IPNR
Subjt:  GESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNR

Query:  PAGQRPEAAGPPPEP---NHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPY-GFPNMFHGSHGHAHGYYH
        P GQRPE A PPP+P   ++F + G G MGG+     MA+TRFGNF  S  FGGL+PSLFNFQ HG+ D ++YG+  G+PY G+ N F G      G   
Subjt:  PAGQRPEAAGPPPEP---NHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPY-GFPNMFHGSHGHAHGYYH

Query:  HLRQG--QQDYYLKRLLMLIGFCVLLALIW
         + +G  Q D +LK +L  +G CV++ LIW
Subjt:  HLRQG--QQDYYLKRLLMLIGFCVLLALIW

AT4G03510.1 RING membrane-anchor 11.8e-2445.45Show/hide
Query:  ESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHS--------HPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIP
        +S   +P + S   +++D SNF+CNICLD  Q+P+VTLCGHLFCWPC++KWL + S          ++CPVCK+ +    LVPLYGRG+ +T    K+  
Subjt:  ESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHS--------HPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIP

Query:  GINIPNRPAG
          ++P RP G
Subjt:  GINIPNRPAG

AT4G03510.2 RING membrane-anchor 11.8e-2445.45Show/hide
Query:  ESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHS--------HPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIP
        +S   +P + S   +++D SNF+CNICLD  Q+P+VTLCGHLFCWPC++KWL + S          ++CPVCK+ +    LVPLYGRG+ +T    K+  
Subjt:  ESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHS--------HPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIP

Query:  GINIPNRPAG
          ++P RP G
Subjt:  GINIPNRPAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGGGTTTGGGGAATCGACGAGCAGGCAACCCCAAAGCCCATCGTGTTCAGACAACAATAGTGATGCTAGTAATTTTGAGTGCAATATTTGCCTGGATTTAGC
TCAAGATCCTATCGTAACTCTATGCGGTCATCTTTTCTGTTGGCCGTGCCTTTATAAATGGCTGCACATTCATTCCCATCCCCAGGAATGTCCAGTTTGCAAGGCCATCA
TAGAAGAGCAAAAGTTGGTTCCCTTATATGGTCGGGGAAAGACATCGACTGACCCGAGATCAAAAAGTATTCCTGGAATTAACATTCCTAATCGTCCTGCGGGACAGAGA
CCTGAAGCAGCAGGTCCTCCCCCAGAACCAAATCATTTCCCTCACAATGGGTTTGGATTCATGGGAGGTCTCGGAGGGTTTGCTCCCATGGCGTCTACAAGGTTTGGTAA
TTTCACCTTGTCTGCGGCATTTGGTGGTCTTGTCCCATCTTTATTCAACTTTCAGATGCATGGATATGCAGATCCAAGCATGTATGGTGCAGGTGCTGGCTTTCCATATG
GGTTCCCTAACATGTTTCATGGTAGCCATGGTCACGCCCATGGATACTATCACCATCTCCGTCAAGGTCAGCAAGATTATTACCTGAAGCGGCTGCTTATGTTGATTGGT
TTCTGTGTTCTTCTTGCCCTAATCTGGCAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCGGGTTTGGGGAATCGACGAGCAGGCAACCCCAAAGCCCATCGTGTTCAGACAACAATAGTGATGCTAGTAATTTTGAGTGCAATATTTGCCTGGATTTAGC
TCAAGATCCTATCGTAACTCTATGCGGTCATCTTTTCTGTTGGCCGTGCCTTTATAAATGGCTGCACATTCATTCCCATCCCCAGGAATGTCCAGTTTGCAAGGCCATCA
TAGAAGAGCAAAAGTTGGTTCCCTTATATGGTCGGGGAAAGACATCGACTGACCCGAGATCAAAAAGTATTCCTGGAATTAACATTCCTAATCGTCCTGCGGGACAGAGA
CCTGAAGCAGCAGGTCCTCCCCCAGAACCAAATCATTTCCCTCACAATGGGTTTGGATTCATGGGAGGTCTCGGAGGGTTTGCTCCCATGGCGTCTACAAGGTTTGGTAA
TTTCACCTTGTCTGCGGCATTTGGTGGTCTTGTCCCATCTTTATTCAACTTTCAGATGCATGGATATGCAGATCCAAGCATGTATGGTGCAGGTGCTGGCTTTCCATATG
GGTTCCCTAACATGTTTCATGGTAGCCATGGTCACGCCCATGGATACTATCACCATCTCCGTCAAGGTCAGCAAGATTATTACCTGAAGCGGCTGCTTATGTTGATTGGT
TTCTGTGTTCTTCTTGCCCTAATCTGGCAA
Protein sequenceShow/hide protein sequence
MASGFGESTSRQPQSPSCSDNNSDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQR
PEAAGPPPEPNHFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGAGFPYGFPNMFHGSHGHAHGYYHHLRQGQQDYYLKRLLMLIG
FCVLLALIWQ