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MS016813 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016813
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1195)
Genome locationscaffold9_1:200413..200945
RNA-Seq ExpressionMS016813
SyntenyMS016813
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010608 - Protein of unknown function DUF1195


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144300.1 uncharacterized protein LOC111014014 [Momordica charantia]2.2e-7899.32Show/hide
Query:  MKSELSPTPTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHGGGARL
        MKSELSPTPTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHGGGARL
Subjt:  MKSELSPTPTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHGGGARL

Query:  PRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK
        PRFWSEAFEAAYEDLIGDVPAVRDAALLE+ARMSLRSVNLDPIPIKSK
Subjt:  PRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK

XP_022962155.1 uncharacterized protein LOC111462692 isoform X2 [Cucurbita moschata]1.7e-5980.65Show/hide
Query:  MKSELSPTPTMAA-------PTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYT
        MK +LS  PTMAA        TG SFFLS+KARYKFW LAAILLLAFWSMFTGSVSLKWS +  FARFYD PR P+F DLDILEVEERER VRHMWNLY+
Subjt:  MKSELSPTPTMAA-------PTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYT

Query:  HGGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK
        HGGG RLPRFW EAFEAAYEDLIGDVPAVRDAALLEIARMSL+SV++DPIPIKSK
Subjt:  HGGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK

XP_022962157.1 uncharacterized protein LOC111462692 isoform X4 [Cucurbita moschata]1.7e-5980.65Show/hide
Query:  MKSELSPTPTMAA-------PTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYT
        MK +LS  PTMAA        TG SFFLS+KARYKFW LAAILLLAFWSMFTGSVSLKWS +  FARFYD PR P+F DLDILEVEERER VRHMWNLY+
Subjt:  MKSELSPTPTMAA-------PTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYT

Query:  HGGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK
        HGGG RLPRFW EAFEAAYEDLIGDVPAVRDAALLEIARMSL+SV++DPIPIKSK
Subjt:  HGGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK

XP_023546987.1 uncharacterized protein LOC111805922 isoform X3 [Cucurbita pepo subsp. pepo]2.3e-5979.74Show/hide
Query:  MKSELSPT-----PTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHG
        MK +LSPT         + TG SFFLS+KARYKFW LAAILLLAFWSMFTGSVSLKWS +  FARFYD PR P+F DLDILEVEERER VRHMWNLY+HG
Subjt:  MKSELSPT-----PTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHG

Query:  GGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK
        GG RLPRFW EAFEAAYEDLIGDVPAVRDAALLEIARMSL+SV++DPIPIKSK
Subjt:  GGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK

XP_023546989.1 uncharacterized protein LOC111805922 isoform X5 [Cucurbita pepo subsp. pepo]2.3e-5979.74Show/hide
Query:  MKSELSPT-----PTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHG
        MK +LSPT         + TG SFFLS+KARYKFW LAAILLLAFWSMFTGSVSLKWS +  FARFYD PR P+F DLDILEVEERER VRHMWNLY+HG
Subjt:  MKSELSPT-----PTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHG

Query:  GGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK
        GG RLPRFW EAFEAAYEDLIGDVPAVRDAALLEIARMSL+SV++DPIPIKSK
Subjt:  GGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK

TrEMBL top hitse value%identityAlignment
A0A6J1CR95 uncharacterized protein LOC1110140141.1e-7899.32Show/hide
Query:  MKSELSPTPTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHGGGARL
        MKSELSPTPTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHGGGARL
Subjt:  MKSELSPTPTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHGGGARL

Query:  PRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK
        PRFWSEAFEAAYEDLIGDVPAVRDAALLE+ARMSLRSVNLDPIPIKSK
Subjt:  PRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK

A0A6J1GGP0 uncharacterized protein LOC1114540631.4e-5983.33Show/hide
Query:  MKSELSPTPTMAAPTGDS-FFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTH-GGGA
        MKSELS  PTMAAP  ++  FLS+KARYKFWALAAILLLAFWSMFTGSVSLKWS +A FA+ YD PR P+F DLDILEVEERER VRHMWNLYTH GGG 
Subjt:  MKSELSPTPTMAAPTGDS-FFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTH-GGGA

Query:  RLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK
        RLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRS+ +DPIP KSK
Subjt:  RLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK

A0A6J1HBY9 uncharacterized protein LOC111462692 isoform X48.4e-6080.65Show/hide
Query:  MKSELSPTPTMAA-------PTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYT
        MK +LS  PTMAA        TG SFFLS+KARYKFW LAAILLLAFWSMFTGSVSLKWS +  FARFYD PR P+F DLDILEVEERER VRHMWNLY+
Subjt:  MKSELSPTPTMAA-------PTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYT

Query:  HGGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK
        HGGG RLPRFW EAFEAAYEDLIGDVPAVRDAALLEIARMSL+SV++DPIPIKSK
Subjt:  HGGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK

A0A6J1HEA2 uncharacterized protein LOC111462692 isoform X28.4e-6080.65Show/hide
Query:  MKSELSPTPTMAA-------PTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYT
        MK +LS  PTMAA        TG SFFLS+KARYKFW LAAILLLAFWSMFTGSVSLKWS +  FARFYD PR P+F DLDILEVEERER VRHMWNLY+
Subjt:  MKSELSPTPTMAA-------PTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYT

Query:  HGGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK
        HGGG RLPRFW EAFEAAYEDLIGDVPAVRDAALLEIARMSL+SV++DPIPIKSK
Subjt:  HGGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK

A0A6J1K9Z2 uncharacterized protein LOC111492438 isoform X22.5e-5980Show/hide
Query:  MKSELSPTPTMAA-------PTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYT
        MK +L   PTMAA        TG SFFLS+KARYKFW LAAILLLAFWSMFTGSVSLKWS +  FARFYD PR P+F DLDILEVEERER VRHMWNLY+
Subjt:  MKSELSPTPTMAA-------PTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYT

Query:  HGGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK
        HGGG RLPRFW EAFEAAYEDLIGDVPAVRDAALLEIARMSL+SV++DPIPIKSK
Subjt:  HGGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19380.1 Protein of unknown function (DUF1195)5.5e-2757.02Show/hide
Query:  KKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVF-HDLDILEVEERERAVRHMWNLYTHGGGARLPRFWSEAFEAAYEDLIGDVPA
        K A YK W L A+LLLAF SM TGSVSLK     H A   D   +  F  DLD+LE+EERE+ VR MW++Y   GG ++PRFW EAFEAAYE LI D  A
Subjt:  KKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVF-HDLDILEVEERERAVRHMWNLYTHGGGARLPRFWSEAFEAAYEDLIGDVPA

Query:  VRDAALLEIARMSL
        VR+AA+ +IA++SL
Subjt:  VRDAALLEIARMSL

AT4G36660.1 Protein of unknown function (DUF1195)4.9e-3651.63Show/hide
Query:  LSPTPTMAAPTGDSFFLSKK----------ARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTH
        L  T T    TG +   SKK           RYKFWA AAILLLAFWSMFTG+V+L+ S + +  R  +    P + +LD+LE+EERE+ V+HMW++YT+
Subjt:  LSPTPTMAAPTGDSFFLSKK----------ARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTH

Query:  GGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKS
            +LPRFW EAF AAYE+L  DVP VR+AA+ EIA+MS RS+ LDP P +S
Subjt:  GGGARLPRFWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKS

AT5G65650.1 Protein of unknown function (DUF1195)1.6e-3957.24Show/hide
Query:  SELSPTPTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHGGGARLPR
        S  + T T    TG S   S K RYKFWALAAILLLAFWSM TG+V+L+WS + +   F D    P+  DLD+LE+EERE+ V+HMW++Y +G   RLPR
Subjt:  SELSPTPTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHGGGARLPR

Query:  FWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKS
        FW EAFEAAYE+L  DVP V +AA+ EIARMS+RS+ +DP P+ S
Subjt:  FWSEAFEAAYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCCGAGCTCTCACCGACACCGACAATGGCCGCTCCCACTGGGGACTCCTTCTTCCTCTCCAAGAAGGCCCGCTACAAATTCTGGGCGCTCGCTGCCATTCTCCT
CCTCGCCTTCTGGTCCATGTTCACCGGCTCCGTCTCCCTCAAATGGTCCCCCTCCGCCCATTTCGCCCGATTCTACGACCGCCCCCGCAGCCCCGTCTTCCACGATCTAG
ACATTCTCGAAGTGGAGGAGCGTGAGAGGGCGGTGCGGCACATGTGGAATCTGTACACGCACGGCGGCGGCGCCCGCCTGCCGCGGTTCTGGTCGGAGGCTTTTGAGGCG
GCGTACGAGGATTTGATCGGCGATGTCCCCGCCGTTCGAGACGCTGCCCTTCTCGAGATCGCCAGGATGTCTCTGCGATCTGTGAACCTCGATCCGATTCCGATTAAATC
CAAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATCCGAGCTCTCACCGACACCGACAATGGCCGCTCCCACTGGGGACTCCTTCTTCCTCTCCAAGAAGGCCCGCTACAAATTCTGGGCGCTCGCTGCCATTCTCCT
CCTCGCCTTCTGGTCCATGTTCACCGGCTCCGTCTCCCTCAAATGGTCCCCCTCCGCCCATTTCGCCCGATTCTACGACCGCCCCCGCAGCCCCGTCTTCCACGATCTAG
ACATTCTCGAAGTGGAGGAGCGTGAGAGGGCGGTGCGGCACATGTGGAATCTGTACACGCACGGCGGCGGCGCCCGCCTGCCGCGGTTCTGGTCGGAGGCTTTTGAGGCG
GCGTACGAGGATTTGATCGGCGATGTCCCCGCCGTTCGAGACGCTGCCCTTCTCGAGATCGCCAGGATGTCTCTGCGATCTGTGAACCTCGATCCGATTCCGATTAAATC
CAAG
Protein sequenceShow/hide protein sequence
MKSELSPTPTMAAPTGDSFFLSKKARYKFWALAAILLLAFWSMFTGSVSLKWSPSAHFARFYDRPRSPVFHDLDILEVEERERAVRHMWNLYTHGGGARLPRFWSEAFEA
AYEDLIGDVPAVRDAALLEIARMSLRSVNLDPIPIKSK