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MS016820 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016820
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger and BTB domain-containing protein 47
Genome locationscaffold9_1:228283..228621
RNA-Seq ExpressionMS016820
SyntenyMS016820
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065239.1 zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa]1.6e-2569.17Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSK-SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPP-----PEVAETPPEKKARTTGDEQPTPPPPAV-EGGEKEEP
        MGKKKTQKTKEIAVAIAETSTSK +D G  QS++ RKRGRPRKV+DE Q E++N++LPP     PEV E PPEKK + T DE   PPP +V EG ++EEP
Subjt:  MGKKKTQKTKEIAVAIAETSTSK-SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPP-----PEVAETPPEKKARTTGDEQPTPPPPAV-EGGEKEEP

Query:  KSGDASRSRGRRKNKPRKSS
        K+GD SRSRGRRKNKPRKSS
Subjt:  KSGDASRSRGRRKNKPRKSS

KAG7020516.1 hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2063.33Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSK-----SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPPP--EVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEP
        MGKKKTQKTK+I+VAIAETSTSK       HG  QSV+ RKRGRPRKV+DE   ++K   LPPP  +VA+ P +KK ++TGDE P     A +  E EEP
Subjt:  MGKKKTQKTKEIAVAIAETSTSK-----SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPPP--EVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEP

Query:  KSGDASRSRGRRKNKPRKSS
        KSGD SRSRGRRKNKPRKSS
Subjt:  KSGDASRSRGRRKNKPRKSS

KGN62596.1 hypothetical protein Csa_022088 [Cucumis sativus]1.2e-2064.96Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSK-SDHG-AAQSVRRRKRGRPRKVVDEAQTEEKNEELPPP--EVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEPKSG
        MGKKKTQKTKEIAVAIAETSTSK +D G   Q ++ RKRGRPRKV++E Q E+++++ PPP  EVAE PPEKK + T DE        +EG ++EEPK+G
Subjt:  MGKKKTQKTKEIAVAIAETSTSK-SDHG-AAQSVRRRKRGRPRKVVDEAQTEEKNEELPPP--EVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEPKSG

Query:  DASRSRGRRKNKPRKSS
        D SRSRGRRKNKPRKSS
Subjt:  DASRSRGRRKNKPRKSS

XP_023537340.1 uncharacterized protein LOC111798433 [Cucurbita pepo subsp. pepo]3.5e-2061.86Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSK-----SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPPPEVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEPKS
        MGKKKTQKTK+I+VAIAE STSK       HG  QSV+ RKRGRPRKV+DE   ++K    PP +VA+ P +KK ++TGDE P     A +  E EEPKS
Subjt:  MGKKKTQKTKEIAVAIAETSTSK-----SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPPPEVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEPKS

Query:  GDASRSRGRRKNKPRKSS
        GD SRSRGRRKNKPRKSS
Subjt:  GDASRSRGRRKNKPRKSS

XP_038884964.1 uncharacterized protein LOC120075548 [Benincasa hispida]9.0e-2468.38Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSK-SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEEL--PPPEVAETPPEKKARTTGDEQPTPPPPAVEGGEKE-EPKSG
        MGKKK QKTKEIAVAIAETS SK +D G  QS++ RKRGRPRKV+DE Q +++N++L  P PEVAE PPEKKA+TT D+   PPP ++E G K+ EPK+G
Subjt:  MGKKKTQKTKEIAVAIAETSTSK-SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEEL--PPPEVAETPPEKKARTTGDEQPTPPPPAVEGGEKE-EPKSG

Query:  DASRSRGRRKNKPRKSS
        D SRSRGRRKNKPRKSS
Subjt:  DASRSRGRRKNKPRKSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRH2 Uncharacterized protein5.9e-2164.96Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSK-SDHG-AAQSVRRRKRGRPRKVVDEAQTEEKNEELPPP--EVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEPKSG
        MGKKKTQKTKEIAVAIAETSTSK +D G   Q ++ RKRGRPRKV++E Q E+++++ PPP  EVAE PPEKK + T DE        +EG ++EEPK+G
Subjt:  MGKKKTQKTKEIAVAIAETSTSK-SDHG-AAQSVRRRKRGRPRKVVDEAQTEEKNEELPPP--EVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEPKSG

Query:  DASRSRGRRKNKPRKSS
        D SRSRGRRKNKPRKSS
Subjt:  DASRSRGRRKNKPRKSS

A0A251R9L0 Uncharacterized protein1.0e-0444.53Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSKSDHGAAQSVRR----RKRGRPRKVVDEAQTEEKNEELPPPEVAETPPE------KKARTTGD---------EQP---
        MGKKK QKTKE++VAIAE + S  D G  QS  +    RKRGRPRK++++ ++ E+ +  P  E A    E      KKA+ T D         EQP   
Subjt:  MGKKKTQKTKEIAVAIAETSTSKSDHGAAQSVRR----RKRGRPRKVVDEAQTEEKNEELPPPEVAETPPE------KKARTTGD---------EQP---

Query:  -TPPPPAVEGG-EKEEPKSGDASRSRGRRKNKPRKSS
          P   +V GG +KEE ++   SRSR RRK+KPRKSS
Subjt:  -TPPPPAVEGG-EKEEPKSGDASRSRGRRKNKPRKSS

A0A5A7VIE6 Zinc finger and BTB domain-containing protein 477.9e-2669.17Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSK-SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPP-----PEVAETPPEKKARTTGDEQPTPPPPAV-EGGEKEEP
        MGKKKTQKTKEIAVAIAETSTSK +D G  QS++ RKRGRPRKV+DE Q E++N++LPP     PEV E PPEKK + T DE   PPP +V EG ++EEP
Subjt:  MGKKKTQKTKEIAVAIAETSTSK-SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPP-----PEVAETPPEKKARTTGDEQPTPPPPAV-EGGEKEEP

Query:  KSGDASRSRGRRKNKPRKSS
        K+GD SRSRGRRKNKPRKSS
Subjt:  KSGDASRSRGRRKNKPRKSS

A0A6J1KLK8 uncharacterized protein LOC1114963532.9e-2063.33Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSK-----SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPPP--EVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEP
        MGKKKTQKTK+I+VAIAETSTSK       HG  QS + RKRGRPRKV+DE   ++K   LPPP  +VA+ P +KK +TTGDE P     A +  E EEP
Subjt:  MGKKKTQKTKEIAVAIAETSTSK-----SDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPPP--EVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEP

Query:  KSGDASRSRGRRKNKPRKSS
        KSGD SRSRGRRKNKPRKSS
Subjt:  KSGDASRSRGRRKNKPRKSS

A0A6J5TRQ2 Uncharacterized protein1.3e-0443.88Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSKSDHGAAQSVRR----RKRGRPRKVVD-----EAQTEEKNEELPPPEVAETPPE--KKARTTGDE-------------
        MGKKK QKTKE++VAIAE + S  D G  QS  +    RKRGRPRK+++     E Q+  + EE      AE   E  KKA+ T DE             
Subjt:  MGKKKTQKTKEIAVAIAETSTSKSDHGAAQSVRR----RKRGRPRKVVD-----EAQTEEKNEELPPPEVAETPPE--KKARTTGDE-------------

Query:  -QPTPPPPAVEGG-EKEEPKSGDASRSRGRRKNKPRKSS
         +  P   +V GG +KEE ++   SRSR RRK+KPRKSS
Subjt:  -QPTPPPPAVEGG-EKEEPKSGDASRSRGRRKNKPRKSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGAAGAAGACCCAGAAGACGAAGGAGATTGCAGTGGCTATAGCGGAAACCTCCACCTCCAAATCCGATCATGGCGCCGCACAATCGGTGCGGCGCAGAAAGAG
GGGCAGACCTCGCAAGGTCGTCGATGAAGCACAAACCGAAGAGAAGAACGAGGAACTTCCGCCGCCGGAAGTTGCAGAAACACCGCCGGAGAAGAAAGCTAGAACCACCG
GAGATGAGCAGCCGACGCCGCCGCCGCCTGCCGTGGAAGGAGGTGAAAAAGAAGAACCCAAATCAGGGGACGCTTCGAGAAGCAGAGGAAGGCGGAAGAACAAACCCAGA
AAGAGTAGC
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAGAAGAAGACCCAGAAGACGAAGGAGATTGCAGTGGCTATAGCGGAAACCTCCACCTCCAAATCCGATCATGGCGCCGCACAATCGGTGCGGCGCAGAAAGAG
GGGCAGACCTCGCAAGGTCGTCGATGAAGCACAAACCGAAGAGAAGAACGAGGAACTTCCGCCGCCGGAAGTTGCAGAAACACCGCCGGAGAAGAAAGCTAGAACCACCG
GAGATGAGCAGCCGACGCCGCCGCCGCCTGCCGTGGAAGGAGGTGAAAAAGAAGAACCCAAATCAGGGGACGCTTCGAGAAGCAGAGGAAGGCGGAAGAACAAACCCAGA
AAGAGTAGC
Protein sequenceShow/hide protein sequence
MGKKKTQKTKEIAVAIAETSTSKSDHGAAQSVRRRKRGRPRKVVDEAQTEEKNEELPPPEVAETPPEKKARTTGDEQPTPPPPAVEGGEKEEPKSGDASRSRGRRKNKPR
KSS