; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016843 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016843
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptiontRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Genome locationscaffold9_1:399006..399767
RNA-Seq ExpressionMS016843
SyntenyMS016843
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065217.1 uncharacterized protein E6C27_scaffold82G005550 [Cucumis melo var. makuwa]5.5e-5357.14Show/hide
Query:  MVLNGFDSV---KAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAA
        MVLNGFDSV   KAI +GN++RRRKLKWLFE  VFLFL+S RS++FS A P+L HFF++++AVLNSHIFVFM F+ MLFVVYSLS LT+ K  SNR++  
Subjt:  MVLNGFDSV---KAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAA

Query:  HSHGNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSP--PPISPAPNSTSVTEAAEEIIPETKQYRRTESERFA
                +S ESLVAP  D     + V EK+    PV   +IA  PA E     +     +   PP SP  +  +  EAA EIIPE K+YRRTESERF 
Subjt:  HSHGNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSP--PPISPAPNSTSVTEAAEEIIPETKQYRRTESERFA

Query:  ERREENKFRRSKTEIR-RESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWIS
        E RE++KFRRSKTEIR R ++ E   FV  V EMDIDDFNRTVESFIAEQK+HIG  +S
Subjt:  ERREENKFRRSKTEIR-RESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWIS

KAG6585580.1 hypothetical protein SDJN03_18313, partial [Cucurbita argyrosperma subsp. sororia]6.2e-5756.76Show/hide
Query:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDA----
        MVLNGFDSVKAI M N  RRRKLKWLFE  +FLFL+  RS+ FS A P  RHFFR+++ VLNSH FVF+ F+ MLFVVYSLS LT+    SNR+DA    
Subjt:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDA----

Query:  -AHSHGNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYRRTESERFA
         A S      +SPESL+A  DDS+ + LVV EKN  T+  +  A      AE  TE+ P    S  P +     T  +     IIPET+QYRRTESERF 
Subjt:  -AHSHGNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYRRTESERFA

Query:  ERREENKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD
        E R+  K RRSKTEIRRE S E  +   SV EMDIDDFNR VE FIAEQKLHIG  ISD
Subjt:  ERREENKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD

KAG7020495.1 hypothetical protein SDJN02_17180, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-5656.7Show/hide
Query:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDA----
        MVLNGFDSVKAI M N  RRRKLKWLFE  +FLFL+  RS+ FS A P  RHFFR+++ VLNSH FVF+ F+ MLFVVYSLS  T+    SNR+DA    
Subjt:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDA----

Query:  -AHSHGNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAPNS--TSVTEAAEEIIPETKQYRRTESER
         A S      +SPESL+A  DDS+ + LVV EKN  T+  +  A      AE  TE+ P    S  P +    +  T V+     IIPET+QYRRTESER
Subjt:  -AHSHGNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAPNS--TSVTEAAEEIIPETKQYRRTESER

Query:  FAERREENKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD
        F E RE  K RRSKTEIRRE S E  +   SV EMDIDDFNR VE FIAEQKLHIG  ISD
Subjt:  FAERREENKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD

XP_022144151.1 uncharacterized protein LOC111013908 [Momordica charantia]8.8e-12898.82Show/hide
Query:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAAHSH
        MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAAHSH
Subjt:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAAHSH

Query:  GNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYRRTESERFAERREE
        GNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAE+PTEQMPFPSPSPPPI PAPNSTSVTEAAEEIIPETKQYRRTESERFAERREE
Subjt:  GNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYRRTESERFAERREE

Query:  NKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD
        NKFRRSKTEIRRESSEEPARFVRSVHEMDI+DFNRTVESFIAEQKLHIGRWISD
Subjt:  NKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD

XP_023002474.1 uncharacterized protein LOC111496300 [Cucurbita maxima]8.4e-5455.81Show/hide
Query:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRS------
        MVLNGFDSVKAI M N  RRRKLKWLFE  +FLFL+  RS+ FS A P  RHFFR+++ VLNSH FVF+ F+ MLFVVYSLS LT+    SNR+      
Subjt:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRS------

Query:  DAAHSHGNATGESPESLVAPSDDSIAEILVVAEKNV-----VTSPV-DGVAIAATPAAEVPTEQM-PFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYR
        DA  SH  A   SPES++A  DDS+ + LVV +KN      + +PV D VA   T  + V  + + P  + +P P SP             IIPET+QYR
Subjt:  DAAHSHGNATGESPESLVAPSDDSIAEILVVAEKNV-----VTSPV-DGVAIAATPAAEVPTEQM-PFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYR

Query:  RTESERFAERREENKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD
        RTESERF + RE+ K RRSKTEIRRE S E  +   SV EMDIDDFNR VESFIAEQKLHIG  ISD
Subjt:  RTESERFAERREENKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD

TrEMBL top hitse value%identityAlignment
A0A0A0LNN4 Uncharacterized protein4.7e-5055.77Show/hide
Query:  MVLNGFDSVKA---IPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAA
        MVLNGFDSVKA   I +GN+ RR KLKWLFE  VFLFL+S RS++FS A P+L  FF++++ VLNSHIFVFM F+ MLF+VYSLS LT+ K  SN ++  
Subjt:  MVLNGFDSVKA---IPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAA

Query:  HSHGNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAP---NSTSVTEAAEEIIPETKQYRRTESERF
                +S ESLVAP  D     + V EK+    PV   +IA  PA E  TE +   +     +SP+P   +  +V EAA EII E K+YRRTESERF
Subjt:  HSHGNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAP---NSTSVTEAAEEIIPETKQYRRTESERF

Query:  AERREENKFRRSKTEIR-RESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWIS
         E +E+ KFRR KTEIR RES EE   FV  V EMDIDDFNRTVESFIAEQK+HIG  +S
Subjt:  AERREENKFRRSKTEIR-RESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWIS

A0A5A7VDR7 Uncharacterized protein2.6e-5357.14Show/hide
Query:  MVLNGFDSV---KAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAA
        MVLNGFDSV   KAI +GN++RRRKLKWLFE  VFLFL+S RS++FS A P+L HFF++++AVLNSHIFVFM F+ MLFVVYSLS LT+ K  SNR++  
Subjt:  MVLNGFDSV---KAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAA

Query:  HSHGNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSP--PPISPAPNSTSVTEAAEEIIPETKQYRRTESERFA
                +S ESLVAP  D     + V EK+    PV   +IA  PA E     +     +   PP SP  +  +  EAA EIIPE K+YRRTESERF 
Subjt:  HSHGNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSP--PPISPAPNSTSVTEAAEEIIPETKQYRRTESERFA

Query:  ERREENKFRRSKTEIR-RESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWIS
        E RE++KFRRSKTEIR R ++ E   FV  V EMDIDDFNRTVESFIAEQK+HIG  +S
Subjt:  ERREENKFRRSKTEIR-RESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWIS

A0A6J1CSG5 uncharacterized protein LOC1110139084.3e-12898.82Show/hide
Query:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAAHSH
        MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAAHSH
Subjt:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAAHSH

Query:  GNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYRRTESERFAERREE
        GNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAE+PTEQMPFPSPSPPPI PAPNSTSVTEAAEEIIPETKQYRRTESERFAERREE
Subjt:  GNATGESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYRRTESERFAERREE

Query:  NKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD
        NKFRRSKTEIRRESSEEPARFVRSVHEMDI+DFNRTVESFIAEQKLHIGRWISD
Subjt:  NKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD

A0A6J1KQJ8 uncharacterized protein LOC1114963004.1e-5455.81Show/hide
Query:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRS------
        MVLNGFDSVKAI M N  RRRKLKWLFE  +FLFL+  RS+ FS A P  RHFFR+++ VLNSH FVF+ F+ MLFVVYSLS LT+    SNR+      
Subjt:  MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRS------

Query:  DAAHSHGNATGESPESLVAPSDDSIAEILVVAEKNV-----VTSPV-DGVAIAATPAAEVPTEQM-PFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYR
        DA  SH  A   SPES++A  DDS+ + LVV +KN      + +PV D VA   T  + V  + + P  + +P P SP             IIPET+QYR
Subjt:  DAAHSHGNATGESPESLVAPSDDSIAEILVVAEKNV-----VTSPV-DGVAIAATPAAEVPTEQM-PFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYR

Query:  RTESERFAERREENKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD
        RTESERF + RE+ K RRSKTEIRRE S E  +   SV EMDIDDFNR VESFIAEQKLHIG  ISD
Subjt:  RTESERFAERREENKFRRSKTEIRRESSEEPARFVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD

A0A6P3YRJ9 uncharacterized protein LOC1074036851.0e-1232.95Show/hide
Query:  FDSV---KAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNR---------
        FD V   KAI M  +  RRKLKWLFE    LF ++  +TW   A      F RQL+AV  SH+FVF+ FN+++F++Y+LS    T+   +          
Subjt:  FDSV---KAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNR---------

Query:  ---SDAAHSHGNATG-ESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATP---AAEVPTEQMPFPSPSPPPISPAPNSTSVTEAAEEIIPETKQY
           S++  S   +TG ESP    AP +    +  ++  +NV + P       A P   A++V T+                 S   T+  + ++   K Y
Subjt:  ---SDAAHSHGNATG-ESPESLVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATP---AAEVPTEQMPFPSPSPPPISPAPNSTSVTEAAEEIIPETKQY

Query:  RRTESERF----AERREENKFRRSKTEIRRESSEEPARFVRSV-HEMDIDDFNRTVESFIAEQK
        RRT+SE F     E+ +  +F+RS TEI      EP R   SV  +M  D+FN  +E+FIA  K
Subjt:  RRTESERF----AERREENKFRRSKTEIRRESSEEPARFVRSV-HEMDIDDFNRTVESFIAEQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTGAATGGATTCGATTCCGTCAAGGCCATTCCCATGGGGAATTTCACTCGCCGCCGGAAGCTCAAGTGGTTATTTGAATTATCTGTGTTCTTGTTCCTCATTTC
TCGCCGCTCCACTTGGTTTTCCTTCGCCGTCCCGGTCCTCCGCCACTTTTTCCGGCAGCTCGTGGCTGTGCTCAACAGCCACATCTTCGTCTTCATGTTCTTTAACGTGA
TGCTCTTCGTCGTCTACTCTCTCTCCGGCTTGACGGAGACCAAGCCCGCCTCGAACAGGAGCGATGCCGCGCATTCTCACGGAAACGCCACCGGAGAGTCGCCGGAGAGT
TTGGTGGCTCCGAGTGACGATTCCATCGCCGAGATATTGGTCGTCGCCGAGAAGAATGTTGTGACGTCGCCGGTGGACGGAGTTGCAATCGCTGCAACTCCGGCGGCGGA
GGTTCCGACGGAACAGATGCCGTTCCCGTCACCCTCGCCGCCGCCGATCTCTCCCGCTCCGAATTCGACCTCCGTGACCGAGGCGGCGGAGGAGATCATTCCGGAGACGA
AACAGTACCGGAGAACGGAATCGGAGAGATTTGCGGAGCGCCGGGAGGAGAACAAATTCCGGCGATCGAAGACGGAGATTCGCCGGGAATCTAGCGAAGAACCGGCGAGA
TTTGTGCGATCAGTGCACGAGATGGACATCGACGATTTTAATCGTACGGTGGAGAGCTTCATCGCCGAACAGAAATTGCACATCGGCAGGTGGATTTCCGAT
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTGAATGGATTCGATTCCGTCAAGGCCATTCCCATGGGGAATTTCACTCGCCGCCGGAAGCTCAAGTGGTTATTTGAATTATCTGTGTTCTTGTTCCTCATTTC
TCGCCGCTCCACTTGGTTTTCCTTCGCCGTCCCGGTCCTCCGCCACTTTTTCCGGCAGCTCGTGGCTGTGCTCAACAGCCACATCTTCGTCTTCATGTTCTTTAACGTGA
TGCTCTTCGTCGTCTACTCTCTCTCCGGCTTGACGGAGACCAAGCCCGCCTCGAACAGGAGCGATGCCGCGCATTCTCACGGAAACGCCACCGGAGAGTCGCCGGAGAGT
TTGGTGGCTCCGAGTGACGATTCCATCGCCGAGATATTGGTCGTCGCCGAGAAGAATGTTGTGACGTCGCCGGTGGACGGAGTTGCAATCGCTGCAACTCCGGCGGCGGA
GGTTCCGACGGAACAGATGCCGTTCCCGTCACCCTCGCCGCCGCCGATCTCTCCCGCTCCGAATTCGACCTCCGTGACCGAGGCGGCGGAGGAGATCATTCCGGAGACGA
AACAGTACCGGAGAACGGAATCGGAGAGATTTGCGGAGCGCCGGGAGGAGAACAAATTCCGGCGATCGAAGACGGAGATTCGCCGGGAATCTAGCGAAGAACCGGCGAGA
TTTGTGCGATCAGTGCACGAGATGGACATCGACGATTTTAATCGTACGGTGGAGAGCTTCATCGCCGAACAGAAATTGCACATCGGCAGGTGGATTTCCGAT
Protein sequenceShow/hide protein sequence
MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAAHSHGNATGESPES
LVAPSDDSIAEILVVAEKNVVTSPVDGVAIAATPAAEVPTEQMPFPSPSPPPISPAPNSTSVTEAAEEIIPETKQYRRTESERFAERREENKFRRSKTEIRRESSEEPAR
FVRSVHEMDIDDFNRTVESFIAEQKLHIGRWISD