; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016854 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016854
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description26S proteasome regulatory subunit 10B
Genome locationscaffold9_1:496254..496833
RNA-Seq ExpressionMS016854
SyntenyMS016854
Gene Ontology termsGO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
InterPro domainsIPR003959 - ATPase, AAA-type, core
IPR003960 - ATPase, AAA-type, conserved site
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR041569 - AAA ATPase, AAA+ lid domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3453639.1 26S protease regulatory subunit S10B-like protein B [Gossypium australe]9.9e-5787.68Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKLNEAKKLESSAHYSADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

MBA0565823.1 hypothetical protein [Gossypium lobatum]9.9e-5787.68Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKLNEAKKLESSAHYSADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

MBA0775682.1 hypothetical protein [Gossypium trilobum]9.9e-5787.68Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKLNEAKKLESSAHYSADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

MBA0808597.1 hypothetical protein [Gossypium harknessii]9.9e-5787.68Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKLNEAKKLESSAHYSADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

XP_022144313.1 26S proteasome regulatory subunit S10B homolog B isoform X1 [Momordica charantia]8.1e-5987.07Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK-VT
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGM+AIRAERDYVIHEDFMK V+
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK-VT

Query:  FFSPSS--------LAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
        FF+ SS        L F S  I AVRKLNEAKKLESSAHYSADFGK+
Subjt:  FFSPSS--------LAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

TrEMBL top hitse value%identityAlignment
A0A0B0MJ37 26S protease regulatory subunit S10B B-like protein4.8e-5787.68Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKLNEAKKLESSAHYSADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

A0A0D2QNZ9 AAA domain-containing protein4.8e-5787.68Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKLNEAKKLESSAHYSADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

A0A1U8J9K4 26S protease regulatory subunit S10B homolog B4.8e-5787.68Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKLNEAKKLESSAHYSADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

A0A5D2ZA84 AAA domain-containing protein4.8e-5787.68Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKLNEAKKLESSAHYSADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

A0A6J1CSZ0 26S proteasome regulatory subunit S10B homolog B isoform X13.9e-5987.07Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK-VT
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGM+AIRAERDYVIHEDFMK V+
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK-VT

Query:  FFSPSS--------LAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
        FF+ SS        L F S  I AVRKLNEAKKLESSAHYSADFGK+
Subjt:  FFSPSS--------LAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

SwissProt top hitse value%identityAlignment
P62333 26S proteasome regulatory subunit 10B1.1e-4267.94Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA  I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ EDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHY
                      AVRK+ ++KKLES   Y
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHY

P62335 26S proteasome regulatory subunit 10B1.1e-4267.94Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA  I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ EDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHY
                      AVRK+ ++KKLES   Y
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHY

Q54PJ1 26S proteasome regulatory subunit 10B5.8e-4469.47Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VK+IMATNRPDVLDPALLRPGRLDRKIEIPLPNE  R+++LKIHAA I KHG++DYEA+ KLA+GFN ADLRNVCTEAGM AIRAERDYV+ EDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHY
                      AVRK  EAKKLE    Y
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHY

Q9MAK9 26S proteasome regulatory subunit S10B homolog B1.3e-5681.88Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA+GIAKHGEIDYEA+VKL EGFNGADLRN+CTEAGM AIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKL+EAKKLESS+HY+ADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

Q9SEI3 26S proteasome regulatory subunit 10B homolog A4.6e-5782.61Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRM+ILKIHAAGIAKHGEIDYEA+VKLAEGFNGADLRN+CTEAGM AIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKL+EAKKLESS+HY+ADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

Arabidopsis top hitse value%identityAlignment
AT1G45000.1 AAA-type ATPase family protein9.5e-5881.88Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA+GIAKHGEIDYEA+VKL EGFNGADLRN+CTEAGM AIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKL+EAKKLESS+HY+ADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE

AT1G53750.1 regulatory particle triple-A 1A2.4e-2455.21Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFM
        +K++MATNRPD LDPALLRPGRLDRK+E  LP+ +SR +I KIH   +    +I +E + +L     GAD+R+VCTEAGM AIRA R  V  +DF+
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFM

AT5G19990.1 regulatory particle triple-A ATPase 6A2.6e-2354.74Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDF
        +K++MATNR D+LD ALLRPGR+DRKIE P PNE+SR +ILKIH+  +     ID + + +   G +GA+L+ VCTEAGM A+R  R +V  EDF
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDF

AT5G20000.1 AAA-type ATPase family protein2.6e-2354.74Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDF
        +K++MATNR D+LD ALLRPGR+DRKIE P PNE+SR +ILKIH+  +     ID + + +   G +GA+L+ VCTEAGM A+R  R +V  EDF
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDF

AT5G43010.1 regulatory particle triple-A ATPase 4A3.3e-5882.61Show/hide
Query:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF
        VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRM+ILKIHAAGIAKHGEIDYEA+VKLAEGFNGADLRN+CTEAGM AIRAERDYVIHEDFMK   
Subjt:  VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTF

Query:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE
                      AVRKL+EAKKLESS+HY+ADFGKE
Subjt:  FSPSSLAFFSILIIAVRKLNEAKKLESSAHYSADFGKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCAAAATGATAATGGCTACGAACAGGCCAGATGTTCTTGACCCTGCACTTCTTCGACCAGGGCGATTGGACCGTAAAATAGAGATTCCGCTGCCAAATGAGCAATCCAG
AATGGAGATCCTGAAGATTCATGCTGCTGGAATTGCCAAGCATGGTGAGATAGACTATGAAGCTGTTGTAAAGCTTGCAGAGGGATTTAATGGGGCTGATTTGCGGAATG
TCTGCACTGAAGCTGGAATGTCAGCTATCCGTGCAGAACGTGACTATGTCATCCATGAAGATTTCATGAAGGTGACTTTTTTTTCCCCTTCTTCTCTAGCATTCTTTAGC
ATATTAATTATCGCAGTACGAAAGCTAAACGAAGCGAAGAAACTCGAGTCCAGTGCACACTACAGTGCTGATTTCGGAAAGGAG
mRNA sequenceShow/hide mRNA sequence
GTCAAAATGATAATGGCTACGAACAGGCCAGATGTTCTTGACCCTGCACTTCTTCGACCAGGGCGATTGGACCGTAAAATAGAGATTCCGCTGCCAAATGAGCAATCCAG
AATGGAGATCCTGAAGATTCATGCTGCTGGAATTGCCAAGCATGGTGAGATAGACTATGAAGCTGTTGTAAAGCTTGCAGAGGGATTTAATGGGGCTGATTTGCGGAATG
TCTGCACTGAAGCTGGAATGTCAGCTATCCGTGCAGAACGTGACTATGTCATCCATGAAGATTTCATGAAGGTGACTTTTTTTTCCCCTTCTTCTCTAGCATTCTTTAGC
ATATTAATTATCGCAGTACGAAAGCTAAACGAAGCGAAGAAACTCGAGTCCAGTGCACACTACAGTGCTGATTTCGGAAAGGAG
Protein sequenceShow/hide protein sequence
VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKVTFFSPSSLAFFS
ILIIAVRKLNEAKKLESSAHYSADFGKE