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MS016879 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016879
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCell growth defect protein
Genome locationscaffold9_1:741093..741317
RNA-Seq ExpressionMS016879
SyntenyMS016879
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039632 - Transmembrane protein 42


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598488.1 hypothetical protein SDJN03_08266, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2174.03Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
        F   LIR+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEE LSFQ  V  +++++    LN
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
XP_008444781.1 PREDICTED: multidrug resistance protein EbrB [Cucumis melo]1.1e-2074.03Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
        F     R+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSFQ  V  ++++I    LN
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
XP_022144157.1 uncharacterized protein LOC111013916 [Momordica charantia]2.3e-2381.82Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
        F   LIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ  V  L+++I    LN
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
XP_022961823.1 uncharacterized protein LOC111462473 [Cucurbita moschata]6.2e-2174.03Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
        F   LIR+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEE LSFQ  V  +++++    LN
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
XP_022997366.1 uncharacterized protein LOC111492304 [Cucurbita maxima]1.6e-2175.32Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
        F   LIR+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSFQ  V  +++++    LN
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
TrEMBL top hitse value%identityAlignment
A0A0A0LPF1 Uncharacterized protein1.1e-2075.32Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
        F   LIR+ LVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSF+  V  L+++I    LN
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
A0A1S3BB59 multidrug resistance protein EbrB5.1e-2174.03Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
        F     R+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSFQ  V  ++++I    LN
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
A0A6J1CSW2 uncharacterized protein LOC1110139161.1e-2381.82Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
        F   LIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ  V  L+++I    LN
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
A0A6J1HCY1 uncharacterized protein LOC1114624733.0e-2174.03Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
        F   LIR+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEE LSFQ  V  +++++    LN
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
A0A6J1K7A2 uncharacterized protein LOC1114923047.9e-2275.32Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
        F   LIR+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSFQ  V  +++++    LN
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ--VNPLIVLISCSTLN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30845.1 unknown protein2.2e-1663.93Show/hide
Query:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ
        F   +I++GLV+  N+ MW C+VNSL+ALSSLQAT TNF+ NFL SGLAG FLF+E+LSF+
Subjt:  FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTTTGAACAGTTAATTAGGTTTGGACTGGTAATAGCGTTCAACTTGGCAATGTGGGGATGTTTTGTCAATAGCTTAAAAGCTCTGTCTTCATTGCAAGCTACAGGGAC
AAACTTTTCAACCAACTTTCTTTGTTCCGGTCTAGCTGGTTTCTTTTTATTTGAAGAAGCATTATCGTTTCAGGTAAATCCATTGATCGTACTCATTTCTTGTTCAACTC
TGAAT
mRNA sequenceShow/hide mRNA sequence
TTTTTTGAACAGTTAATTAGGTTTGGACTGGTAATAGCGTTCAACTTGGCAATGTGGGGATGTTTTGTCAATAGCTTAAAAGCTCTGTCTTCATTGCAAGCTACAGGGAC
AAACTTTTCAACCAACTTTCTTTGTTCCGGTCTAGCTGGTTTCTTTTTATTTGAAGAAGCATTATCGTTTCAGGTAAATCCATTGATCGTACTCATTTCTTGTTCAACTC
TGAAT
Protein sequenceShow/hide protein sequence
FFEQLIRFGLVIAFNLAMWGCFVNSLKALSSLQATGTNFSTNFLCSGLAGFFLFEEALSFQVNPLIVLISCSTLN