; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016883 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016883
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationscaffold9_1:786662..786994
RNA-Seq ExpressionMS016883
SyntenyMS016883
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8057224.1 hypothetical protein FH972_013931 [Carpinus fangiana]1.3e-3070.27Show/hide
Query:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEE
        MA++RSNKLSQA  A++KQI+KRCSS    KKQ     Q   +P+DVP+GHFVVYV ENRSRYIVP+++L RPEFQILLQ AEEEFGFSH MGLTIPCEE
Subjt:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEE

Query:  QVFRALTSALR
        +VF++LTS LR
Subjt:  QVFRALTSALR

KAG6598492.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3075.24Show/hide
Query:  AVVKQIMKRCSSSLRSKKQPPPPPQC--------EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRAL
        AVVKQIMKRC S LRS K      QC         EIPVDVP+GHFVVYVSENRSRYIVPLT L  PEFQILLQLAEEEFGFSH MGLTIPCEEQVF++L
Subjt:  AVVKQIMKRCSSSLRSKKQPPPPPQC--------EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRAL

Query:  TSALR
        TS LR
Subjt:  TSALR

XP_004152658.1 auxin-responsive protein SAUR50 [Cucumis sativus]4.4e-3172.81Show/hide
Query:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-----PPPPQC---EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIP
        S KL+    AVVKQI KRCSS   +KK           QC   EEIPVDVP+GHFVVYVSENRSRYIVPLTFL RPEFQILLQLAEEEFGFSH MGLTIP
Subjt:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-----PPPPQC---EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIP

Query:  CEEQVFRALTSALR
        CEEQVF++LTS LR
Subjt:  CEEQVFRALTSALR

XP_008444786.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]1.7e-3071.55Show/hide
Query:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-------PPPPQC----EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGL
        S KL+    AVVKQI KRCSS   +KK             QC    EEIPVDVP+GHFVVYVSENRSRYIVPLTFL RPEFQILLQLAEEEFGFSH MGL
Subjt:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-------PPPPQC----EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGL

Query:  TIPCEEQVFRALTSAL
        TIPCEEQVFR+LTS L
Subjt:  TIPCEEQVFRALTSAL

XP_038886317.1 auxin-responsive protein SAUR50-like [Benincasa hispida]2.3e-3276.15Show/hide
Query:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQC---EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQV
        S KL+Q   AVVKQI KRC SSLR  K      QC   +EIPVDVP+GHFVVYVSENRSRYIVPLTFL RPEFQILLQLAEEEFGF+H MGLTIPCEEQV
Subjt:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQC---EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQV

Query:  FRALTSALR
        F++LTS LR
Subjt:  FRALTSALR

TrEMBL top hitse value%identityAlignment
A0A067HAI1 Uncharacterized protein1.1e-3069.37Show/hide
Query:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEE
        MA+R+SNKLSQ   AV+KQI+KRCSS    KKQ       + +P+DVP+GHFVVYV ENRSRYI+P+TFL RPEFQ LLQ AEEEFGF H MGLTIPCEE
Subjt:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEE

Query:  QVFRALTSALR
        QVF++LTS LR
Subjt:  QVFRALTSALR

A0A0A0LRM7 Uncharacterized protein2.1e-3172.81Show/hide
Query:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-----PPPPQC---EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIP
        S KL+    AVVKQI KRCSS   +KK           QC   EEIPVDVP+GHFVVYVSENRSRYIVPLTFL RPEFQILLQLAEEEFGFSH MGLTIP
Subjt:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-----PPPPQC---EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIP

Query:  CEEQVFRALTSALR
        CEEQVF++LTS LR
Subjt:  CEEQVFRALTSALR

A0A1S3BB62 auxin-induced protein 15A-like8.1e-3171.55Show/hide
Query:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-------PPPPQC----EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGL
        S KL+    AVVKQI KRCSS   +KK             QC    EEIPVDVP+GHFVVYVSENRSRYIVPLTFL RPEFQILLQLAEEEFGFSH MGL
Subjt:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-------PPPPQC----EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGL

Query:  TIPCEEQVFRALTSAL
        TIPCEEQVFR+LTS L
Subjt:  TIPCEEQVFRALTSAL

A0A5A7VD05 Auxin-induced protein 15A-like8.1e-3171.55Show/hide
Query:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-------PPPPQC----EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGL
        S KL+    AVVKQI KRCSS   +KK             QC    EEIPVDVP+GHFVVYVSENRSRYIVPLTFL RPEFQILLQLAEEEFGFSH MGL
Subjt:  SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-------PPPPQC----EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGL

Query:  TIPCEEQVFRALTSAL
        TIPCEEQVFR+LTS L
Subjt:  TIPCEEQVFRALTSAL

A0A5N6RBC3 Uncharacterized protein6.2e-3170.27Show/hide
Query:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEE
        MA++RSNKLSQA  A++KQI+KRCSS    KKQ     Q   +P+DVP+GHFVVYV ENRSRYIVP+++L RPEFQILLQ AEEEFGFSH MGLTIPCEE
Subjt:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEE

Query:  QVFRALTSALR
        +VF++LTS LR
Subjt:  QVFRALTSALR

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR508.9e-2759.63Show/hide
Query:  VRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQV
        +++++KL+Q   A++KQI+KRC SSL  K        C  +P+DVP+GHF VYV ENRSRYIVP++FL  PEFQ LLQ AEEEFGF H MGLTIPC+E V
Subjt:  VRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQV

Query:  FRALTSALR
        F+ LTS +R
Subjt:  FRALTSALR

P0DKL1 Auxin-responsive protein SAUR502.3e-1947.22Show/hide
Query:  VRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQV
        +R+S+K +QA    +K+I+K+CSS  ++            +P DVP+GHFVVYV E R+RYIVP++ L  P FQ LLQ +EEEFGF+H MG+ IPC+E  
Subjt:  VRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQV

Query:  FRALTSAL
        F +  S +
Subjt:  FRALTSAL

P33081 Auxin-induced protein 15A3.9e-1453.03Show/hide
Query:  DVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRM-GLTIPCEEQVFRALTSAL
        D P+G+  VYV E   R+++P+++L +P FQ LL  AEEEFG+ H M GLTIPC E VF+ +TS L
Subjt:  DVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRM-GLTIPCEEQVFRALTSAL

P33082 Auxin-induced protein X156.6e-1450.75Show/hide
Query:  VDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRM-GLTIPCEEQVFRALTSAL
        VD P+G+  VYV E   R+++P++++ +P FQ LL  AEEEFG+ H M GLTIPC E+VF+ +T  L
Subjt:  VDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRM-GLTIPCEEQVFRALTSAL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 102.2e-2555.36Show/hide
Query:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKK-QPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCE
        MA++RS+K + +  A +KQI+KRCSS  + K        Q +++P DVP+GHF VYV  NRSRYIVP+++L   EFQ LL+LAEEEFGF H MGLTIPC+
Subjt:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKK-QPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCE

Query:  EQVFRALTSALR
        E  FR+L S  R
Subjt:  EQVFRALTSALR

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family8.0e-3163.39Show/hide
Query:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEE-IPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCE
        MA++++NKL+Q   A++KQI+KRCSS    KKQ     + E   P++VP+GHFVVYV ENR RY+VP++FL RPEFQ+LLQ AEEEFGF H MGLTIPCE
Subjt:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEE-IPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCE

Query:  EQVFRALTSALR
        E VFR+LTS LR
Subjt:  EQVFRALTSALR

AT2G18010.1 SAUR-like auxin-responsive protein family1.6e-2655.36Show/hide
Query:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKK-QPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCE
        MA++RS+K + +  A +KQI+KRCSS  + K        Q +++P DVP+GHF VYV  NRSRYIVP+++L   EFQ LL+LAEEEFGF H MGLTIPC+
Subjt:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKK-QPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCE

Query:  EQVFRALTSALR
        E  FR+L S  R
Subjt:  EQVFRALTSALR

AT2G21220.1 SAUR-like auxin-responsive protein family6.7e-3060.18Show/hide
Query:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQC---EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIP
        MAV+RS+KL+Q   A++KQI+KRCSS  ++        QC   + +PVDVP+GHF VYV E RSRYIVP++FL  P+F+ LLQ AEEEFGF+H MGLTIP
Subjt:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQC---EEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIP

Query:  CEEQVFRALTSAL
        CEE VFR+LTS +
Subjt:  CEEQVFRALTSAL

AT4G34760.1 SAUR-like auxin-responsive protein family6.3e-2859.63Show/hide
Query:  VRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQV
        +++++KL+Q   A++KQI+KRC SSL  K        C  +P+DVP+GHF VYV ENRSRYIVP++FL  PEFQ LLQ AEEEFGF H MGLTIPC+E V
Subjt:  VRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQV

Query:  FRALTSALR
        F+ LTS +R
Subjt:  FRALTSALR

AT4G38860.1 SAUR-like auxin-responsive protein family1.8e-2762.5Show/hide
Query:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRM-GLTIPCE
        MAV+RS+KL+Q   A++KQI+KRCSS    KKQ       E +P+DVP+GHF VYV E R+RYIVP++FL  PEF ILLQ AEEEFGF H M GLTIPCE
Subjt:  MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRM-GLTIPCE

Query:  EQVFRALTSALR
        E VF +LTS +R
Subjt:  EQVFRALTSALR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGCGCCGATCCAACAAGCTCTCGCAGGCGGCGCCGGCGGTGGTCAAGCAAATTATGAAGCGCTGTTCCTCCAGCTTGAGGAGCAAGAAGCAGCCGCCGCCGCC
GCCGCAATGCGAGGAGATTCCGGTGGACGTGCCGGAGGGGCACTTCGTGGTGTACGTGAGCGAGAACAGGAGCCGCTACATCGTGCCGCTCACGTTTCTGGCGCGCCCCG
AGTTCCAAATCCTTCTCCAATTGGCCGAGGAGGAGTTCGGTTTCAGCCACCGCATGGGCCTCACCATCCCCTGCGAGGAGCAGGTCTTTCGAGCCCTAACCTCGGCCCTC
CGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGCGCCGATCCAACAAGCTCTCGCAGGCGGCGCCGGCGGTGGTCAAGCAAATTATGAAGCGCTGTTCCTCCAGCTTGAGGAGCAAGAAGCAGCCGCCGCCGCC
GCCGCAATGCGAGGAGATTCCGGTGGACGTGCCGGAGGGGCACTTCGTGGTGTACGTGAGCGAGAACAGGAGCCGCTACATCGTGCCGCTCACGTTTCTGGCGCGCCCCG
AGTTCCAAATCCTTCTCCAATTGGCCGAGGAGGAGTTCGGTTTCAGCCACCGCATGGGCCTCACCATCCCCTGCGAGGAGCAGGTCTTTCGAGCCCTAACCTCGGCCCTC
CGA
Protein sequenceShow/hide protein sequence
MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSAL
R