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MS016890 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016890
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold9_1:853834..854196
RNA-Seq ExpressionMS016890
SyntenyMS016890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652124.1 hypothetical protein Csa_022629 [Cucumis sativus]5.3e-3873.95Show/hide
Query:  KPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKS
        K NGA+ FV+HV+ DQ+DYRGGS    +SPARILSRIRR+FMRFIFY PSRGS+++   A +QRNLEKFEPPKTSCSS+YSSYSHY+EAIADCIEF NKS
Subjt:  KPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKS

Query:  SLQEQIGVG-GRNSDGNAM
        S Q+QIGV  GR SD NAM
Subjt:  SLQEQIGVG-GRNSDGNAM

KAG6598497.1 hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4076Show/hide
Query:  ISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRG---SSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCI
        I  K NGA+ F+I+V  DQED+RGGS GVS+SPAR LSRIRR+ MRF+FYFPSRG   SSSS IMAS+QRNLEKFEPPKTSCSSNYSSYSHY+EAIADCI
Subjt:  ISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRG---SSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCI

Query:  EFFNKSSLQEQIGVGGRNSDGNAMV
        EFFNKSS Q+QIG+    SD NAMV
Subjt:  EFFNKSSLQEQIGVGGRNSDGNAMV

KAG7029433.1 hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-4076Show/hide
Query:  ISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRG---SSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCI
        I  K NGA+ F+I+V  DQEDYRGGS GVS+SPAR LSRIRR+ MRF+FYFPSRG   SSSS IMAS++RNLEKFEPPKTSCSSNYSSYSHY+EAIADCI
Subjt:  ISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRG---SSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCI

Query:  EFFNKSSLQEQIGVGGRNSDGNAMV
        EFFNKSS Q+QIG+    SD NAMV
Subjt:  EFFNKSSLQEQIGVGGRNSDGNAMV

XP_022144335.1 uncharacterized protein LOC111014042 [Momordica charantia]7.6e-61100Show/hide
Query:  ISHKPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFN
        ISHKPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFN
Subjt:  ISHKPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFN

Query:  KSSLQEQIGVGGRNSDGNAMV
        KSSLQEQIGVGGRNSDGNAMV
Subjt:  KSSLQEQIGVGGRNSDGNAMV

XP_022996993.1 uncharacterized protein LOC111492057 [Cucurbita maxima]3.9e-4176.8Show/hide
Query:  ISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSP---IMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCI
        I  K NGA+ F+I+V  DQEDYRGGS GVS+SP R LSRIRR+ MRF+FYFPSRGSSSSP   IMAS+QRNLEKFEPPKTSCSSNYSSYSHY+EAIADCI
Subjt:  ISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSP---IMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCI

Query:  EFFNKSSLQEQIGVGGRNSDGNAMV
        EFFNKSS Q+QIG+    SD NAMV
Subjt:  EFFNKSSLQEQIGVGGRNSDGNAMV

TrEMBL top hitse value%identityAlignment
A0A0A0LPF9 Uncharacterized protein8.8e-3974.17Show/hide
Query:  KPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKS
        K NGA+ FV+HV+ DQ+DYRGGS    +SPARILSRIRR+FMRFIFY PSRGS+++   A +QRNLEKFEPPKTSCSS+YSSYSHY+EAIADCIEF NKS
Subjt:  KPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKS

Query:  SLQEQIGVG-GRNSDGNAMV
        S Q+QIGV  GR SD NAMV
Subjt:  SLQEQIGVG-GRNSDGNAMV

A0A5A7VC16 Uncharacterized protein1.3e-3772Show/hide
Query:  KPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSS-----PIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIE
        K NGA+ FVIHV+ DQ+DYRGGS    +SPARI+SRIRR+ MRFIFY PSRGSS++     P  A +Q+NLEKFEPPKTSCSS+YSSYSHY+EAIADCIE
Subjt:  KPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSS-----PIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIE

Query:  FFNKSSLQEQIGVG-GRNSDGNAMV
        FFNKSS Q+QIGV  GR SD NAMV
Subjt:  FFNKSSLQEQIGVG-GRNSDGNAMV

A0A6A1UVD7 Uncharacterized protein2.0e-1952.1Show/hide
Query:  ADGFVIHVRDQE---------DYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSS-SSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIE
        A+ FVI VR  E              SS  + S  ++ +R R++ MR +F  PSRGSS +S + ASRQ+N ++FEPPKTSCSS YSS+SHY+EAIADCIE
Subjt:  ADGFVIHVRDQE---------DYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSS-SSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIE

Query:  FFNKSSLQEQIGVGGRNSD
        FFNKSS  ++I   GR SD
Subjt:  FFNKSSLQEQIGVGGRNSD

A0A6J1CRC4 uncharacterized protein LOC1110140423.7e-61100Show/hide
Query:  ISHKPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFN
        ISHKPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFN
Subjt:  ISHKPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFN

Query:  KSSLQEQIGVGGRNSDGNAMV
        KSSLQEQIGVGGRNSDGNAMV
Subjt:  KSSLQEQIGVGGRNSDGNAMV

A0A6J1KCK5 uncharacterized protein LOC1114920571.9e-4176.8Show/hide
Query:  ISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSP---IMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCI
        I  K NGA+ F+I+V  DQEDYRGGS GVS+SP R LSRIRR+ MRF+FYFPSRGSSSSP   IMAS+QRNLEKFEPPKTSCSSNYSSYSHY+EAIADCI
Subjt:  ISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSP---IMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCI

Query:  EFFNKSSLQEQIGVGGRNSDGNAMV
        EFFNKSS Q+QIG+    SD NAMV
Subjt:  EFFNKSSLQEQIGVGGRNSDGNAMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75717.1 unknown protein4.5e-1150.7Show/hide
Query:  RILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSN-YSSYSHYSEAIADCIEFFNKSS
        ++  ++ ++ MR I +     S       SR  + E+FEPPK SCSS+ YSS+ HYSEAIADCIEFFNKSS
Subjt:  RILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSN-YSSYSHYSEAIADCIEFFNKSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCAGCCACAAACCAAACGGAGCAGACGGCTTCGTCATTCACGTAAGGGATCAAGAAGATTACAGAGGAGGAAGTTCCGGCGTGAGCCTCTCTCCGGCGAGGATTCTGAG
CCGGATCCGCCGGATGTTCATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGTCGCCAATAATGGCGTCCAGGCAGAGAAATCTGGAGAAATTCGAGCCGC
CGAAAACATCTTGCAGCTCGAATTACTCGTCTTACTCGCATTACAGCGAAGCAATCGCCGATTGTATCGAGTTCTTCAACAAGTCGTCGCTGCAGGAACAAATCGGCGTC
GGAGGCAGAAACTCCGATGGAAATGCGATGGTA
mRNA sequenceShow/hide mRNA sequence
ATCAGCCACAAACCAAACGGAGCAGACGGCTTCGTCATTCACGTAAGGGATCAAGAAGATTACAGAGGAGGAAGTTCCGGCGTGAGCCTCTCTCCGGCGAGGATTCTGAG
CCGGATCCGCCGGATGTTCATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGTCGCCAATAATGGCGTCCAGGCAGAGAAATCTGGAGAAATTCGAGCCGC
CGAAAACATCTTGCAGCTCGAATTACTCGTCTTACTCGCATTACAGCGAAGCAATCGCCGATTGTATCGAGTTCTTCAACAAGTCGTCGCTGCAGGAACAAATCGGCGTC
GGAGGCAGAAACTCCGATGGAAATGCGATGGTA
Protein sequenceShow/hide protein sequence
ISHKPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGV
GGRNSDGNAMV