; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016892 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016892
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGibberellin-regulated protein 2
Genome locationscaffold9_1:859898..860080
RNA-Seq ExpressionMS016892
SyntenyMS016892
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144284.1 snakin-2-like [Momordica charantia]2.0e-3098.36Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

XP_022951559.1 snakin-2-like [Cucurbita moschata]4.7e-2788.52Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGGACA RCRLSSRPRLC+RACGTCCQRCNCVPPGTSGNHH+CPCYA++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

XP_023002563.1 snakin-2-like [Cucurbita maxima]2.8e-2790.16Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGGACA RCRLSSRPRLC+RACGTCCQRCNCVPPGTSGNHHLCPCYA++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

XP_038886088.1 snakin-2-like isoform X1 [Benincasa hispida]7.2e-2893.44Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGGACAGRCRLSSR RLCNRACGTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

XP_038886089.1 snakin-2-like isoform X2 [Benincasa hispida]7.2e-2893.44Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGGACAGRCRLSSR RLCNRACGTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LNS5 Uncharacterized protein1.5e-2690.16Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DC GAC  RC LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

A0A1S3BBY7 snakin-2-like1.5e-2690.16Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DC GAC  RC LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

A0A6J1CRW3 snakin-2-like9.9e-3198.36Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

A0A6J1GJ50 snakin-2-like2.3e-2788.52Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGGACA RCRLSSRPRLC+RACGTCCQRCNCVPPGTSGNHH+CPCYA++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

A0A6J1KTY1 snakin-2-like1.3e-2790.16Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGGACA RCRLSSRPRLC+RACGTCCQRCNCVPPGTSGNHHLCPCYA++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 111.1e-2170.49Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DC   C  RC LSSRP LC+RACGTCC RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

P46687 Gibberellin-regulated protein 35.1e-2475.41Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGG C GRC  SSRP LC RAC +CC RCNCVPPGT+GNHHLCPCYA++TT GGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

P46688 Gibberellin-regulated protein 29.5e-2373.77Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGG C  RC  SSR +LC RAC +CC RCNCVPPGTSGN HLCPCYA++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

P46689 Gibberellin-regulated protein 18.6e-2475.41Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCG AC  RCRLS RPRLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

Q93X17 Snakin-21.9e-2681.97Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGGACA RCRLSSRPRLCNRACGTCC RCNCVPPGTSGN   CPCYA++TTHG + KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 16.1e-2575.41Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCG AC  RCRLS RPRLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

AT1G75750.2 GAST1 protein homolog 16.1e-2575.41Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCG AC  RCRLS RPRLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

AT2G18420.1 Gibberellin-regulated family protein7.5e-2370.49Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DC   C  RC LSSRP LC+RACGTCC RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

AT4G09600.1 GAST1 protein homolog 33.6e-2575.41Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGG C GRC  SSRP LC RAC +CC RCNCVPPGT+GNHHLCPCYA++TT GGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP

AT4G09610.1 GAST1 protein homolog 26.8e-2473.77Show/hide
Query:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP
        +DCGG C  RC  SSR +LC RAC +CC RCNCVPPGTSGN HLCPCYA++TTHGGR KCP
Subjt:  LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGACTGCGGCGGCGCGTGCGCGGGGAGGTGCCGGCTGTCGTCGAGGCCGCGGCTGTGCAATAGGGCGTGCGGGACGTGCTGTCAGCGCTGCAACTGCGTTCCGCCGGG
AACCTCCGGAAACCACCACCTCTGCCCTTGCTACGCCGCCATGACCACCCACGGCGGCCGCCCCAAATGCCCC
mRNA sequenceShow/hide mRNA sequence
TTAGACTGCGGCGGCGCGTGCGCGGGGAGGTGCCGGCTGTCGTCGAGGCCGCGGCTGTGCAATAGGGCGTGCGGGACGTGCTGTCAGCGCTGCAACTGCGTTCCGCCGGG
AACCTCCGGAAACCACCACCTCTGCCCTTGCTACGCCGCCATGACCACCCACGGCGGCCGCCCCAAATGCCCC
Protein sequenceShow/hide protein sequence
LDCGGACAGRCRLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP