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MS016898 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016898
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold9_1:894240..894665
RNA-Seq ExpressionMS016898
SyntenyMS016898
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598502.1 hypothetical protein SDJN03_08280, partial [Cucurbita argyrosperma subsp. sororia]3.7e-5982.39Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA
        MGWLIRERRGPAWKQGWAEQA++S+TPPP+PLLAILGILVILLSVSS+S++RSQVK T+INF LFFLLLPL+FVFVGNSIVRYGR+VII+PRTKL+P+Y 
Subjt:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA

Query:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY
        T+   ASP G AVLLVVLLVLISYQPYF S+WFPAIWRPY+Y
Subjt:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY

KAG7020455.1 hypothetical protein SDJN02_17139, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-6383.8Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA
        MGWLIRERRGP+WKQGWAEQAL+S+ PPPRPLLA+LGILVILLSVSSYS+YRSQVKRTK+NF +FFLLLPL+FVFVGNSIVRYGR+VII+PRTKL+P+Y 
Subjt:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA

Query:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY
         EG  ASPWGAA LLVVLLVLISYQPYF S+WFP+IWRPY+Y
Subjt:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY

KAG7029438.1 hypothetical protein SDJN02_07777, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-5882.39Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA
        MGWLIRERRGPAWKQGWAEQA++S+TPPP+PLLAILGILVILLSVSS+S +RSQVK T INF LFFLLLPL+FVFVGNSIVRYGR+VII+PRTKL+P+Y 
Subjt:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA

Query:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY
        T+   ASP G AVLLVVLLVLISYQPYF S+WFPAIWRPY+Y
Subjt:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY

XP_031737284.1 uncharacterized protein LOC116402215 [Cucumis sativus]1.3e-6487.41Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA
        MGWLIRERRGPAWKQGWAEQALSS+TPPPRPLLAILGILVILLSVSSYS+YRSQVK+T+INF LFFLLLPL+FVFVGNSIVRYGR+VII+PRTKL+P+Y 
Subjt:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA

Query:  TEG-GGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY
        TEG   ASPWGAAVLLVVLLVL+SYQPYF S+WFPAIWRPY+Y
Subjt:  TEG-GGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY

XP_041018444.1 uncharacterized protein LOC121260573 [Juglans microcarpa x Juglans regia]8.6e-4055.71Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA
        MGW +RERRGPAWK GW EQ L+S++PPP PL+AI GI+V+LL ++SY+TYRSQ+++T I F LF  LLP+L +F+ +SI +YGR+VI +P TK   ++ 
Subjt:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA

Query:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPY
         E  G  PWG A+L++VL++++SYQPYF S W+P IW  Y
Subjt:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPY

TrEMBL top hitse value%identityAlignment
A0A0A0LNS9 Uncharacterized protein6.4e-6587.41Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA
        MGWLIRERRGPAWKQGWAEQALSS+TPPPRPLLAILGILVILLSVSSYS+YRSQVK+T+INF LFFLLLPL+FVFVGNSIVRYGR+VII+PRTKL+P+Y 
Subjt:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA

Query:  TEG-GGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY
        TEG   ASPWGAAVLLVVLLVL+SYQPYF S+WFPAIWRPY+Y
Subjt:  TEG-GGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY

A0A2P5F7W0 Transmembrane protein2.1e-3955.71Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA
        MGW +RE    +WK GW E+ L+S++ PP PL+AI+GI+V+LLS+SSY+ Y+SQV++T I F LF L LPLL +F+ NS+ +YG V IISPRTK +P  A
Subjt:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA

Query:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPY
        ++GGG SPWG A+LL++L+VLISY+ YF S+W+  +W  Y
Subjt:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPY

A0A5A7VAG3 Uncharacterized protein6.4e-6587.41Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA
        MGWLIRERRGPAWKQGWAEQALSS+TPPPRPLLAILGILVILLSVSSYS+YRSQVK+T+INF LFFLLLPL+FVFVGNSIVRYGR+VII+PRTKL+P+Y 
Subjt:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA

Query:  TEG-GGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY
        TEG   ASPWGAAVLLVVLLVL+SYQPYF S+WFPAIWRPY+Y
Subjt:  TEG-GGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY

A0A6P9DT84 uncharacterized protein LOC1183438143.5e-3955Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA
        MGW  RERRGPAWK GW EQ L+S++PPP PL+AI GI+V+LL ++SY TYRSQ+++T I F LF  +LP+L +F+ +SI +YGR+VI +P TK   ++ 
Subjt:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYA

Query:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPY
         E  G  PWG A+L++VL++++SYQPYF S W+P IW  Y
Subjt:  TEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPY

W9RNV3 Uncharacterized protein2.1e-3958.87Show/hide
Query:  MGWLIRE-RRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLY
        MGWLIRE R G +WK GW E+ L+S+T PP PLLAI+GI+V+LLSVSSY+ Y+SQ+++T I F LF LLLPL+ +FV +S+ +YG V+++ PRTK +   
Subjt:  MGWLIRE-RRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLY

Query:  ATEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPY
        A   GG +PWG  VLLVVL VLISYQ YF+S+W+P IW  Y
Subjt:  ATEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFPAIWRPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein9.3e-0830.43Show/hide
Query:  SMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGN--SIVRYGRVVIISPRTKLQPLYATEG----GGASPWGAAVLLVV
        S++P P P+L IL +  + L  S Y +     +  +   N   LL+PL  + +    S +     ++    +  +  Y + G    GG+SPWG A L+V+
Subjt:  SMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGN--SIVRYGRVVIISPRTKLQPLYATEG----GGASPWGAAVLLVV

Query:  LLVLISYQPYFKSRW
        LLVL+ YQ  F   W
Subjt:  LLVLISYQPYFKSRW

AT5G19875.1 unknown protein4.6e-0731.78Show/hide
Query:  PRPLLAILGILV-ILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYATEGGGASPWGAAVLLVVLLVLISYQPY
        P P L  L I+V  +LS + Y  + S ++ T  +  L F+  PL  + + +     G +    P  +   ++     G+SPWG A +LV++L ++SYQ  
Subjt:  PRPLLAILGILV-ILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYATEGGGASPWGAAVLLVVLLVLISYQPY

Query:  FKSRWFP
        F+ RWFP
Subjt:  FKSRWFP

AT5G42146.1 unknown protein2.0e-2643.7Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISP-RTKLQPLY
        MGW I+ERRG +WK+GW E+ L + + PP  LLA+L I+ +LL +SSY  Y+ +V++T  N  LF L LP+LFVFV  S+    R++  S    +     
Subjt:  MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISP-RTKLQPLY

Query:  ATEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFP
        +  G G  PWG  ++L++LL+L+S Q YF S W+P
Subjt:  ATEGGGASPWGAAVLLVVLLVLISYQPYFKSRWFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGGTTGATAAGAGAGAGAAGAGGCCCAGCATGGAAACAAGGATGGGCAGAACAGGCATTATCTTCCATGACTCCACCACCAAGGCCTCTGCTTGCCATTCTTGG
AATCTTGGTCATTTTGCTATCTGTGTCATCATATTCAACTTACAGGTCCCAGGTGAAGAGAACAAAGATCAACTTTAACCTGTTTTTCCTGCTTTTGCCTCTATTGTTTG
TCTTTGTTGGAAACTCGATCGTTAGATATGGCCGTGTTGTAATCATCTCCCCGAGAACGAAGCTCCAGCCGCTTTATGCCACCGAAGGCGGGGGTGCCTCGCCTTGGGGG
GCGGCGGTTTTGCTGGTGGTGTTGTTGGTTTTGATATCTTATCAGCCATACTTCAAATCTAGATGGTTTCCAGCCATATGGAGACCATATCATTAT
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGGTTGATAAGAGAGAGAAGAGGCCCAGCATGGAAACAAGGATGGGCAGAACAGGCATTATCTTCCATGACTCCACCACCAAGGCCTCTGCTTGCCATTCTTGG
AATCTTGGTCATTTTGCTATCTGTGTCATCATATTCAACTTACAGGTCCCAGGTGAAGAGAACAAAGATCAACTTTAACCTGTTTTTCCTGCTTTTGCCTCTATTGTTTG
TCTTTGTTGGAAACTCGATCGTTAGATATGGCCGTGTTGTAATCATCTCCCCGAGAACGAAGCTCCAGCCGCTTTATGCCACCGAAGGCGGGGGTGCCTCGCCTTGGGGG
GCGGCGGTTTTGCTGGTGGTGTTGTTGGTTTTGATATCTTATCAGCCATACTTCAAATCTAGATGGTTTCCAGCCATATGGAGACCATATCATTAT
Protein sequenceShow/hide protein sequence
MGWLIRERRGPAWKQGWAEQALSSMTPPPRPLLAILGILVILLSVSSYSTYRSQVKRTKINFNLFFLLLPLLFVFVGNSIVRYGRVVIISPRTKLQPLYATEGGGASPWG
AAVLLVVLLVLISYQPYFKSRWFPAIWRPYHY