; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016899 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016899
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger homeobox protein 4-like isoform X1
Genome locationscaffold9_1:900440..901045
RNA-Seq ExpressionMS016899
SyntenyMS016899
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585540.1 hypothetical protein SDJN03_18273, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2250.91Show/hide
Query:  EIEAVKRHYNHLKTINSELKAKKQKMM---PSFYNGSPQPETGSSSSAMEIAQ-LTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQS
        E EA+K+HYNHLK INSELKAKKQ+M+    S  N S  PE G+SSSAME+ + LTV+SS+                      H P P +  Q+   SQ+
Subjt:  EIEAVKRHYNHLKTINSELKAKKQKMM---PSFYNGSPQPETGSSSSAMEIAQ-LTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQS

Query:  FQIPP-----YD-TSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS
        FQIP      YD +SL P+GIPDLNISLEE  QRNYS+  AA+AR+ RI+ICK KN N   KLQ+
Subjt:  FQIPP-----YD-TSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS

XP_008444813.1 PREDICTED: uncharacterized protein LOC103488049 [Cucumis melo]1.9e-2449.7Show/hide
Query:  EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQT------PEP
        +IEA+KRH+ +LKTINSELKAKKQ+++  F N S  PE G+SSS AME+A+LTVKSS   +EN+H +                +PS+KNQT         
Subjt:  EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQT------PEP

Query:  SQSFQ-----IPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK--NSNAAIKLQS
        ++++Q     IP YD SLGP+GIPDLN+SLE+   ++Y+K  AA+ARQ RI+I K K  N+N A KLQS
Subjt:  SQSFQ-----IPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK--NSNAAIKLQS

XP_011649664.1 myocardin-related transcription factor A [Cucumis sativus]3.8e-2550.88Show/hide
Query:  EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQT---PEPSQS
        +IEA+KRH+ +LKTINSELKAKKQ+++  F N S  P+ G+S+S AMEIA+LTVKSS   +EN+H +                +PS+KNQT    E S S
Subjt:  EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQT---PEPSQS

Query:  FQ--------IPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK----NSNAAIKLQS
         Q        IP YD SLGP+GIPDLN+SLE+   +NY+K  AA+ARQ RI+I K K    N+N A KLQS
Subjt:  FQ--------IPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK----NSNAAIKLQS

XP_022144188.1 uncharacterized protein LOC111013942 [Momordica charantia]6.7e-6299.23Show/hide
Query:  MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRN
        MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHN HRHYPQPSIKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRN
Subjt:  MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRN

Query:  YSKIKAAQARQRRIRICKTKNSNAAIKLQS
        YSKIKAAQARQRRIRICKTKNSNAAIKLQS
Subjt:  YSKIKAAQARQRRIRICKTKNSNAAIKLQS

XP_022951578.1 uncharacterized protein LOC111454352 [Cucurbita moschata]2.3e-2250.91Show/hide
Query:  EIEAVKRHYNHLKTINSELKAKKQKMM---PSFYNGSPQPETGSSSSAMEIAQ-LTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQS
        E EA+K+HYNHLK INSELKAKKQ+M+    S  N S  PE G+SSSAME+ + LTV+SS+                      H P P +  Q+   SQ+
Subjt:  EIEAVKRHYNHLKTINSELKAKKQKMM---PSFYNGSPQPETGSSSSAMEIAQ-LTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQS

Query:  FQIPP-----YD-TSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS
        FQIP      YD +SL P+GIPDLNISLEE  QRNYS+  AA+AR+ RI+ICK KN N   KLQ+
Subjt:  FQIPP-----YD-TSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS

TrEMBL top hitse value%identityAlignment
A0A0A0LRP1 Uncharacterized protein1.9e-2550.88Show/hide
Query:  EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQT---PEPSQS
        +IEA+KRH+ +LKTINSELKAKKQ+++  F N S  P+ G+S+S AMEIA+LTVKSS   +EN+H +                +PS+KNQT    E S S
Subjt:  EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQT---PEPSQS

Query:  FQ--------IPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK----NSNAAIKLQS
         Q        IP YD SLGP+GIPDLN+SLE+   +NY+K  AA+ARQ RI+I K K    N+N A KLQS
Subjt:  FQ--------IPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK----NSNAAIKLQS

A0A1S3BAR4 uncharacterized protein LOC1034880499.2e-2549.7Show/hide
Query:  EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQT------PEP
        +IEA+KRH+ +LKTINSELKAKKQ+++  F N S  PE G+SSS AME+A+LTVKSS   +EN+H +                +PS+KNQT         
Subjt:  EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQT------PEP

Query:  SQSFQ-----IPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK--NSNAAIKLQS
        ++++Q     IP YD SLGP+GIPDLN+SLE+   ++Y+K  AA+ARQ RI+I K K  N+N A KLQS
Subjt:  SQSFQ-----IPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK--NSNAAIKLQS

A0A5A7VHE1 Uncharacterized protein9.2e-2549.7Show/hide
Query:  EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQT------PEP
        +IEA+KRH+ +LKTINSELKAKKQ+++  F N S  PE G+SSS AME+A+LTVKSS   +EN+H +                +PS+KNQT         
Subjt:  EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSS-AMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQT------PEP

Query:  SQSFQ-----IPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK--NSNAAIKLQS
        ++++Q     IP YD SLGP+GIPDLN+SLE+   ++Y+K  AA+ARQ RI+I K K  N+N A KLQS
Subjt:  SQSFQ-----IPPYDTSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTK--NSNAAIKLQS

A0A6J1CSM9 uncharacterized protein LOC1110139423.2e-6299.23Show/hide
Query:  MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRN
        MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHN HRHYPQPSIKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRN
Subjt:  MMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQSFQIPPYDTSLGPIGIPDLNISLEEFAQRN

Query:  YSKIKAAQARQRRIRICKTKNSNAAIKLQS
        YSKIKAAQARQRRIRICKTKNSNAAIKLQS
Subjt:  YSKIKAAQARQRRIRICKTKNSNAAIKLQS

A0A6J1GI34 uncharacterized protein LOC1114543521.1e-2250.91Show/hide
Query:  EIEAVKRHYNHLKTINSELKAKKQKMM---PSFYNGSPQPETGSSSSAMEIAQ-LTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQS
        E EA+K+HYNHLK INSELKAKKQ+M+    S  N S  PE G+SSSAME+ + LTV+SS+                      H P P +  Q+   SQ+
Subjt:  EIEAVKRHYNHLKTINSELKAKKQKMM---PSFYNGSPQPETGSSSSAMEIAQ-LTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQS

Query:  FQIPP-----YD-TSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS
        FQIP      YD +SL P+GIPDLNISLEE  QRNYS+  AA+AR+ RI+ICK KN N   KLQ+
Subjt:  FQIPP-----YD-TSLGPIGIPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAATTGAGGCTGTGAAGCGCCATTACAATCATCTCAAAACCATCAATTCGGAGTTGAAAGCGAAAAAGCAAAAGATGATGCCGAGTTTCTACAACGGTTCTCCGCAACC
AGAAACAGGAAGTTCAAGTTCCGCCATGGAAATCGCTCAACTCACTGTCAAATCCTCCTCTCCAACTCTCGAGAATCATCATCATCAACATCAACAACAACAAAAACAGA
ATCATAATCATCATCGTCATTATCCGCAACCGTCCATCAAGAATCAGACGCCAGAACCGAGCCAGAGTTTCCAAATCCCTCCGTACGATACCTCATTGGGCCCAATCGGA
ATCCCCGACTTGAACATCTCTCTCGAAGAATTCGCTCAGAGGAATTACTCCAAAATCAAGGCCGCTCAAGCGAGACAGAGAAGGATTCGGATCTGCAAGACCAAGAACTC
TAACGCAGCTATCAAATTGCAGAGC
mRNA sequenceShow/hide mRNA sequence
GAAATTGAGGCTGTGAAGCGCCATTACAATCATCTCAAAACCATCAATTCGGAGTTGAAAGCGAAAAAGCAAAAGATGATGCCGAGTTTCTACAACGGTTCTCCGCAACC
AGAAACAGGAAGTTCAAGTTCCGCCATGGAAATCGCTCAACTCACTGTCAAATCCTCCTCTCCAACTCTCGAGAATCATCATCATCAACATCAACAACAACAAAAACAGA
ATCATAATCATCATCGTCATTATCCGCAACCGTCCATCAAGAATCAGACGCCAGAACCGAGCCAGAGTTTCCAAATCCCTCCGTACGATACCTCATTGGGCCCAATCGGA
ATCCCCGACTTGAACATCTCTCTCGAAGAATTCGCTCAGAGGAATTACTCCAAAATCAAGGCCGCTCAAGCGAGACAGAGAAGGATTCGGATCTGCAAGACCAAGAACTC
TAACGCAGCTATCAAATTGCAGAGC
Protein sequenceShow/hide protein sequence
EIEAVKRHYNHLKTINSELKAKKQKMMPSFYNGSPQPETGSSSSAMEIAQLTVKSSSPTLENHHHQHQQQQKQNHNHHRHYPQPSIKNQTPEPSQSFQIPPYDTSLGPIG
IPDLNISLEEFAQRNYSKIKAAQARQRRIRICKTKNSNAAIKLQS