; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016907 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016907
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSec-independent protein translocase protein TATC
Genome locationscaffold9_1:988800..989393
RNA-Seq ExpressionMS016907
SyntenyMS016907
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598509.1 hypothetical protein SDJN03_08287, partial [Cucurbita argyrosperma subsp. sororia]1.9e-6170.87Show/hide
Query:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPLPHRPL------PPPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR
        ME VLIPFSAE+SRS+K++NF P TVH  GLLN PPP V  Y    RQQPPLLPLP RP       PPP CR +GT KSRDQSLTPKKS    K  KRSR
Subjt:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPLPHRPL------PPPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR

Query:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR
         PPA KS AE +IVDSTNRLGPEPSHVPKDLW+VLGL  S   R GG      E EFSGSAF VSPPPS VPLPKF++RREV  NVEAAGVDAGATDNLR
Subjt:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR

Query:  RLLRLR
        RLLRLR
Subjt:  RLLRLR

KAG7029446.1 hypothetical protein SDJN02_07785, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-6170.87Show/hide
Query:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPLPHRPLPP------PPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR
        ME VLIPFSAE+SRS+K++NF P TVH  GLLN PPP V  Y    RQQPPLLPLP RP PP      P CR +GT KSRDQSLTPKKS    K  KRSR
Subjt:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPLPHRPLPP------PPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR

Query:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR
         PPA KS AE +IVDSTNRLGPEPSHVPKDLW+VLGL  S   R GG      E EFSGSAF VSPPPS VPLPKF++RREV  NVEAAGVDAGATDNLR
Subjt:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR

Query:  RLLRLR
        RLLRLR
Subjt:  RLLRLR

XP_022962625.1 uncharacterized protein LOC111463019 [Cucurbita moschata]1.1e-6170.87Show/hide
Query:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPLPHRPLP------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR
        ME VLIPFSAE+SRS+K++NF P TVH  GLLN PPP V  Y    RQQPPLLPLP RP P      PP CR +GT KSRDQSLTPKKS    K  KRSR
Subjt:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPLPHRPLP------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR

Query:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR
         PPA KS AE +IVDSTNRLGPEPSHVPKDLW+VLGL  S   R GG      E EFSGSAF VSPPPSSVPLPKF++RRE+  NVEAAGVDAGATDNLR
Subjt:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR

Query:  RLLRLR
        RLLRLR
Subjt:  RLLRLR

XP_022997633.1 uncharacterized protein LOC111492508 [Cucurbita maxima]1.3e-6271.36Show/hide
Query:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPLPHRPLP------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR
        MEAVLIPFSAE+SRS+K++NF P TVH  G+LN PPP V  Y  R  QQPPLLPLP RP P      PP CR +GT KSRDQSLTPKKS    K  KRSR
Subjt:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPLPHRPLP------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR

Query:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR
         PPA KS AE +IVDSTNRLGPEPSHVPKDLW+VLGL  S   R GG    + E EFSGSAF VSPPPSSVPLPKF++RREV  NVEAAGVDAGATDNLR
Subjt:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR

Query:  RLLRLR
        RLLRLR
Subjt:  RLLRLR

XP_023546813.1 proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]3.8e-6271.36Show/hide
Query:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPLPHRPLP------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR
        MEAVLIPFSAE+SRS+K+ NF P TVH  GLLN PPP V  Y  R  QQPPLLPLP RP P      PP CR +GT KSRDQSLTPKKS    K  KRSR
Subjt:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPLPHRPLP------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR

Query:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR
         PPA KS AE +IVDSTNRLGPEPSHVPKDLW+VLGL  S   R GG    + E EFSGS F VSPPPSSVPLPKF++RREV  NVEAAGVDAGATDNLR
Subjt:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR

Query:  RLLRLR
        RLLRLR
Subjt:  RLLRLR

TrEMBL top hitse value%identityAlignment
A0A0A0LN70 Uncharacterized protein1.2e-5363.43Show/hide
Query:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAF-YCRR-QQPPLLPLPHRPLPP----------PPCRQRGTPKSRDQSLTPKKSKSKTKST
        ME V IPFSA+QSR    QNF P  VH GG LNFP PG+++  CR+ QQPPLLPLP RPLPP          P C +      RDQSLTPKKS    K  
Subjt:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAF-YCRR-QQPPLLPLPHRPLPP----------PPCRQRGTPKSRDQSLTPKKSKSKTKST

Query:  KRSREPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLG-----CSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRRE-VGRNVEAAG
        KRSR PPAAKS  E+VIVDSTNRLGPEPSHVPKDL  +LGL      C   R    +   AAE+EFSGSA+S SPPPSSVPLPKFS+RR+ VG NVEA+G
Subjt:  KRSREPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLG-----CSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRRE-VGRNVEAAG

Query:  VDAGATDNLRRLLRLR
        VDAGATDNLRRLLR+R
Subjt:  VDAGATDNLRRLLRLR

A0A5A7VG22 Sec-independent protein translocase protein TATC9.3e-5466.35Show/hide
Query:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPLPHRPLPPPPC------RQRGTPKSRDQSLTPKKSKSKTKSTKRSR
        ME VLIPFSA+QSRS   QN  P TVH  GLLNFP  G+ +  RR  QQPPLLPLP RPLPP         RQ+   K RDQSL PKKS    K  KRSR
Subjt:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPLPHRPLPPPPC------RQRGTPKSRDQSLTPKKSKSKTKSTKRSR

Query:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGER-RLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRRE-VGRNVEAAGVDAGATDN
         PPAAKS  E+VI+DSTNRLGPEP HVPKDLW+VLGL  S    +   +   AAE+EFSGSA S SPPPSSVPLPKFS+RR+ VG NVE AGVDAGATDN
Subjt:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGER-RLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRRE-VGRNVEAAGVDAGATDN

Query:  LRRLLRLR
        LRRLLRLR
Subjt:  LRRLLRLR

A0A6J1HFM4 uncharacterized protein LOC1114630195.4e-6270.87Show/hide
Query:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPLPHRPLP------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR
        ME VLIPFSAE+SRS+K++NF P TVH  GLLN PPP V  Y    RQQPPLLPLP RP P      PP CR +GT KSRDQSLTPKKS    K  KRSR
Subjt:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPLPHRPLP------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR

Query:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR
         PPA KS AE +IVDSTNRLGPEPSHVPKDLW+VLGL  S   R GG      E EFSGSAF VSPPPSSVPLPKF++RRE+  NVEAAGVDAGATDNLR
Subjt:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR

Query:  RLLRLR
        RLLRLR
Subjt:  RLLRLR

A0A6J1KEH8 uncharacterized protein LOC1114925086.4e-6371.36Show/hide
Query:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPLPHRPLP------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR
        MEAVLIPFSAE+SRS+K++NF P TVH  G+LN PPP V  Y  R  QQPPLLPLP RP P      PP CR +GT KSRDQSLTPKKS    K  KRSR
Subjt:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPLPHRPLP------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSR

Query:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR
         PPA KS AE +IVDSTNRLGPEPSHVPKDLW+VLGL  S   R GG    + E EFSGSAF VSPPPSSVPLPKF++RREV  NVEAAGVDAGATDNLR
Subjt:  EPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLR

Query:  RLLRLR
        RLLRLR
Subjt:  RLLRLR

A0A6J1KQN3 uncharacterized protein LOC1114963326.7e-3653.46Show/hide
Query:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYC----RRQQPPLLPLPHRPLPP------PPCRQRGTPKSRDQSLTPKKSKSKTKSTKR
        MEAVLIP            NF P             P V FY      R+QPP  PLP R  PP      P C  +G  + RDQSL PKKS    KS KR
Subjt:  MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYC----RRQQPPLLPLPHRPLPP------PPCRQRGTPKSRDQSLTPKKSKSKTKSTKR

Query:  SREPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGC--------SGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVE-AA
         RE P   + AE +IVDSTNRLGPEPSHVPKDLW VLGL             R LG     AAE+EFSGSAFSVSPPPSSVPLP FS+ R++  NVE AA
Subjt:  SREPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGC--------SGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVE-AA

Query:  GVDAGATDNLRRLLRLR
        G+D GAT+NLRRLLRLR
Subjt:  GVDAGATDNLRRLLRLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20070.1 unknown protein2.9e-0755.81Show/hide
Query:  VSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLRRLLRLR
        +SPPPSS+P+P+FS++ ++  NVEAAG    AT+N+RR+L+LR
Subjt:  VSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLRRLLRLR

AT3G21570.1 unknown protein1.3e-0442.86Show/hide
Query:  AAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLRRLLRLR
        +A ++    S F+VSP PSS+PLP FS +++    V    +D  A+ +LRRLLRL+
Subjt:  AAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLRRLLRLR

AT4G32020.1 unknown protein6.0e-0531.68Show/hide
Query:  RRQQPPLLPLPHRPLPPPPCR-----QRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVD--STNRLGPEPSHVPKDLWKVLGLGCSGERR
        R   PP+ P    PLPPP         +GT K   +SL+   + S+ +  KR  E P   S   + + D  ST R+GP+P  +P            G+ R
Subjt:  RRQQPPLLPLPHRPLPPPPCR-----QRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVD--STNRLGPEPSHVPKDLWKVLGLGCSGERR

Query:  LGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLRRLLRL
        L G  + +A   ++G     SPPPS VPLP F  ++              AT++L R+LRL
Subjt:  LGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLRRLLRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGGTTCTGATTCCATTTTCTGCTGAGCAATCTCGCAGTATGAAAACCCAAAACTTCCCTCCGATCACCGTCCACCGCGGCGGTCTTCTCAACTTCCCTCCGCC
GGGCGTCGCGTTTTACTGCCGCCGCCAGCAGCCGCCTCTCCTCCCTTTGCCCCACCGTCCATTGCCCCCGCCGCCGTGCAGGCAAAGGGGTACCCCCAAATCCAGAGACC
AATCTCTTACCCCAAAGAAATCAAAATCAAAAACAAAATCAACTAAACGAAGTAGAGAACCGCCAGCGGCGAAATCGGGGGCGGAAATTGTGATCGTTGATTCGACGAAT
CGGCTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAAAGTTTTAGGATTAGGATGCTCCGGTGAGCGGCGTTTGGGGGGGACGACGGCCGCGGCGGCGGAGAT
GGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCTCCGAGCAGTGTGCCGCTTCCCAAGTTCTCTGTGAGGCGGGAGGTGGGCCGTAATGTGGAGGCTGCCGGAGTAG
ATGCCGGAGCCACCGACAATCTCCGGCGACTTTTGCGCCTCCGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGGTTCTGATTCCATTTTCTGCTGAGCAATCTCGCAGTATGAAAACCCAAAACTTCCCTCCGATCACCGTCCACCGCGGCGGTCTTCTCAACTTCCCTCCGCC
GGGCGTCGCGTTTTACTGCCGCCGCCAGCAGCCGCCTCTCCTCCCTTTGCCCCACCGTCCATTGCCCCCGCCGCCGTGCAGGCAAAGGGGTACCCCCAAATCCAGAGACC
AATCTCTTACCCCAAAGAAATCAAAATCAAAAACAAAATCAACTAAACGAAGTAGAGAACCGCCAGCGGCGAAATCGGGGGCGGAAATTGTGATCGTTGATTCGACGAAT
CGGCTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAAAGTTTTAGGATTAGGATGCTCCGGTGAGCGGCGTTTGGGGGGGACGACGGCCGCGGCGGCGGAGAT
GGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCTCCGAGCAGTGTGCCGCTTCCCAAGTTCTCTGTGAGGCGGGAGGTGGGCCGTAATGTGGAGGCTGCCGGAGTAG
ATGCCGGAGCCACCGACAATCTCCGGCGACTTTTGCGCCTCCGA
Protein sequenceShow/hide protein sequence
MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRRQQPPLLPLPHRPLPPPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTN
RLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGRNVEAAGVDAGATDNLRRLLRLR