; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016910 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016910
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA ligase 1 isoform X1
Genome locationscaffold9_1:1007776..1009690
RNA-Seq ExpressionMS016910
SyntenyMS016910
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029449.1 hypothetical protein SDJN02_07788 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-11370.55Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ
        MSRCFPYPPPGY  KVARTEAALIESIKLQSER+Q K D KKEKSKH+KE+S+  K K + RKERKEKSSRS  LNDQKQK C K+AKDRL+GTKVEAEQ
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ

Query:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT
        LEKSGLTEEHGQPVWP SPGYLSDGTQINHKRKRD+ LQP+E  KPGK+IRIKLASSLS QE+SSAD++QTCS SG     DQKRDENS    ++  CF 
Subjt:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT

Query:  DSNTVVAVEEA---------PPKPRIKDHSRS--------VHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDG
        +S T +AV++          PP   +KD + S         HAVK+I   GNV+  P RTRSP ES YEALFEKW+PPPLQLEQQMDDEEWLF T KQDG
Subjt:  DSNTVVAVEEA---------PPKPRIKDHSRS--------VHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDG

Query:  QTTKATTNKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF
        ++TK  TN+AFS +PSCRSSSLWPRGQYL DADVYSLPYTIP+
Subjt:  QTTKATTNKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF

XP_022144272.1 chromatin assembly factor 1 subunit A-like [Momordica charantia]8.0e-17498.77Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ
        MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSS SCDLNDQKQKECAKQA+DRLKGTKVEAEQ
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ

Query:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT
        LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENS GPNQQKPCFT
Subjt:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT

Query:  DSNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPSC
        +SNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPSC
Subjt:  DSNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPSC

Query:  RSSSLWPRGQYLPDADVYSLPYTIPF
        RSSSLWPRGQYLPDADVYSLPYTIPF
Subjt:  RSSSLWPRGQYLPDADVYSLPYTIPF

XP_023545923.1 uncharacterized protein LOC111805212 isoform X1 [Cucurbita pepo subsp. pepo]6.0e-11370.14Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ
        MSRCFPYPPPGY  KVARTEAALIESIKLQSER+Q K D KKEKSKH+KE+S+  K K + RKE KEKSSRS DLNDQKQK C K+ KDRL+GTKVEAEQ
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ

Query:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT
        LEKSGLTEEHGQPVWP SPGYLSDGTQIN KRKRD  LQP+E  KPGK+IRIKLASSLS QE+SSA ++Q CS SGR    DQK DENS    ++  CF 
Subjt:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT

Query:  DSNTVVAVEEA----------PP---------KPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQ
        +S T +AV++           PP         KP+IKD   S HAVK+I   GNV+  P RTRSP ES YEALFEKW+PPPLQLEQQMDDEEWLF T KQ
Subjt:  DSNTVVAVEEA----------PP---------KPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQ

Query:  DGQTTKATTNKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF
        DG++TK  TN+AFS VPSCRSSSLWPRGQYL DADVYSLPYTIP+
Subjt:  DGQTTKATTNKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF

XP_038885448.1 DNA ligase 1 isoform X1 [Benincasa hispida]9.0e-11775.38Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERS----EKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKV
        MSRCFPYPPPGY  KVA TEAALIESIKLQSER+QSK+D KKEKSKH+KE+S    E+SK+KK + KERKEKSS S DLNDQKQKEC K+AK+ LKGTKV
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERS----EKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKV

Query:  EAEQLEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQK
        EAEQLE+SGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDA LQ NE  KPGKIIRIKL  SLS QEDSSA ++QTCSTSGR   VDQKRDENSRG  QQ 
Subjt:  EAEQLEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQK

Query:  PCFTDSNTVVAVEE-APPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFG-TRKQDGQTTKATTNKAF
          FT + T VAV + +  KP+I+       +VKDI  +GNVV  P RTRSPAES YEALFEKW+ PPLQLEQQ DDE+WLFG TRKQDGQ   +T NKAF
Subjt:  PCFTDSNTVVAVEE-APPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFG-TRKQDGQTTKATTNKAF

Query:  SPVPSC-RSSSLWPRGQYLPDADVYSLPYTIPF
        S VPSC RSSSLWPRGQYL DADVYSLPYTIPF
Subjt:  SPVPSC-RSSSLWPRGQYLPDADVYSLPYTIPF

XP_038885449.1 nucleoporin GLE1 isoform X2 [Benincasa hispida]4.2e-11474.77Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERS----EKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKV
        MSRCFPYPPPGY  KVA TEAALIESIKLQSER+QSK+D KKEKSKH+KE+S    E+SK+KK + KERKEKSS S DLNDQKQKEC K+AK+ LKGTKV
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERS----EKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKV

Query:  EAEQLEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQK
        EAEQLE+SGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDA LQ NE    GKIIRIKL  SLS QEDSSA ++QTCSTSGR   VDQKRDENSRG  QQ 
Subjt:  EAEQLEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQK

Query:  PCFTDSNTVVAVEE-APPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFG-TRKQDGQTTKATTNKAF
          FT + T VAV + +  KP+I+       +VKDI  +GNVV  P RTRSPAES YEALFEKW+ PPLQLEQQ DDE+WLFG TRKQDGQ   +T NKAF
Subjt:  PCFTDSNTVVAVEE-APPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFG-TRKQDGQTTKATTNKAF

Query:  SPVPSC-RSSSLWPRGQYLPDADVYSLPYTIPF
        S VPSC RSSSLWPRGQYL DADVYSLPYTIPF
Subjt:  SPVPSC-RSSSLWPRGQYLPDADVYSLPYTIPF

TrEMBL top hitse value%identityAlignment
A0A6J1CT76 chromatin assembly factor 1 subunit A-like3.9e-17498.77Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ
        MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSS SCDLNDQKQKECAKQA+DRLKGTKVEAEQ
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ

Query:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT
        LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENS GPNQQKPCFT
Subjt:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT

Query:  DSNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPSC
        +SNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPSC
Subjt:  DSNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPSC

Query:  RSSSLWPRGQYLPDADVYSLPYTIPF
        RSSSLWPRGQYLPDADVYSLPYTIPF
Subjt:  RSSSLWPRGQYLPDADVYSLPYTIPF

A0A6J1HBK0 DNA ligase 1 isoform X12.5e-11273.39Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ
        MSRCFPYPPPGY  KVARTEAALIESIKLQSER+Q K D KKEKSKH+KE+S+  K K + RKERKEKSSRS  LNDQKQK C K+AKDRL+GTKVEAEQ
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ

Query:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT
        LEKSGLTEEHGQPVWP SPGYLSDGTQINHKRKRD+ LQP+E  KPGK+IRIKLASSLS QE+SSA ++QTCS SGR DC    RDENS    ++  CF 
Subjt:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT

Query:  DSNTVVAVEE-APPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPS
        +S T +AV++    KP+IKD     HAVK+I   GNV+  P RTRSP ES YEALFEKW+PPPLQLEQQMDDEEWLF T KQDG+++K  TN+AFS +PS
Subjt:  DSNTVVAVEE-APPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPS

Query:  CRSSSLWPRGQYLPDADVYSLPYTIPF
        CRSSSLWPRGQYL DADVYSLPYTIP+
Subjt:  CRSSSLWPRGQYLPDADVYSLPYTIPF

A0A6J1HD43 uncharacterized protein LOC111462522 isoform X21.1e-10972.78Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ
        MSRCFPYPPPGY  KVARTEAALIESIKLQSER+Q K D KKEKSKH+KE+S+  K K + RKERKEKSSRS  LNDQKQK C K+AKDRL+GTKVEAEQ
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ

Query:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT
        LEKSGLTEEHGQPVWP SPGYLSDGTQINHKRKRD+ LQP+E    GK+IRIKLASSLS QE+SSA ++QTCS SGR DC    RDENS    ++  CF 
Subjt:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT

Query:  DSNTVVAVEE-APPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPS
        +S T +AV++    KP+IKD     HAVK+I   GNV+  P RTRSP ES YEALFEKW+PPPLQLEQQMDDEEWLF T KQDG+++K  TN+AFS +PS
Subjt:  DSNTVVAVEE-APPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPS

Query:  CRSSSLWPRGQYLPDADVYSLPYTIPF
        CRSSSLWPRGQYL DADVYSLPYTIP+
Subjt:  CRSSSLWPRGQYLPDADVYSLPYTIPF

A0A6J1KAB9 uncharacterized protein LOC111492505 isoform X27.4e-10968.99Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ
        MSRCFPYPPPGY  KVARTEAALIESIKLQSER+Q K D KKEKSKH+KE+S+  K K   RKE KEKSSRS DLNDQK K C K+AKDRL+GTKVEAEQ
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ

Query:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT
        LEKSGLTEEHGQPVWP SPGYLSDGTQINHKRKRD  LQP+E    GK+IRIKLASSLS QE+SSA  + TCS SGR    DQK DENS    ++  CF 
Subjt:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT

Query:  DSNTVVAVEEA----------PP---------KPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQ
        +S T  AV++           PP         KP+IKD   S HAVK+I   GNV+  P RTRSP ES YEALFEKW+PPPLQLEQQMDDEEWLF T KQ
Subjt:  DSNTVVAVEEA----------PP---------KPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQ

Query:  DGQTTKATTNKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF
        DG++TK  TN+AFS +PSCR+SSLWPRGQYL  ADVYSLPYTIP+
Subjt:  DGQTTKATTNKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF

A0A6J1KC15 uncharacterized protein LOC111492505 isoform X11.6e-11169.57Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ
        MSRCFPYPPPGY  KVARTEAALIESIKLQSER+Q K D KKEKSKH+KE+S+  K K   RKE KEKSSRS DLNDQK K C K+AKDRL+GTKVEAEQ
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ

Query:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT
        LEKSGLTEEHGQPVWP SPGYLSDGTQINHKRKRD  LQP+E  KPGK+IRIKLASSLS QE+SSA  + TCS SGR    DQK DENS    ++  CF 
Subjt:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFT

Query:  DSNTVVAVEEA----------PP---------KPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQ
        +S T  AV++           PP         KP+IKD   S HAVK+I   GNV+  P RTRSP ES YEALFEKW+PPPLQLEQQMDDEEWLF T KQ
Subjt:  DSNTVVAVEEA----------PP---------KPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQ

Query:  DGQTTKATTNKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF
        DG++TK  TN+AFS +PSCR+SSLWPRGQYL  ADVYSLPYTIP+
Subjt:  DGQTTKATTNKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20100.1 unknown protein3.0e-1730.65Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ
        MSR F  PPP YA   A  +  L+E  K++     S       K  HRKE+ EK KEKK +                 K+K+  +Q     K    E+EQ
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ

Query:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRD---AKLQPNEDSKP--GKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQ
        LEKS LTEE  QP      GYLSDG+Q + KR+R+   A ++    + P  GK +RI++      + ++       CSTSG      Q+  E     +  
Subjt:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRD---AKLQPNEDSKP--GKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQ

Query:  KPCFTDSNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQ-QMDDEEWLFGT-RKQDGQTTKA---TT
          C  D    VAV      P     S  V  + + + +        + +   ES Y +LF++ +PP + LE+     ++WLFGT RK++  + K+   T 
Subjt:  KPCFTDSNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQ-QMDDEEWLFGT-RKQDGQTTKA---TT

Query:  NKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF
              + + R  S  PR   L +  ++SLPYT+PF
Subjt:  NKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF

AT1G20100.2 unknown protein3.6e-0734.81Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ
        MSR F  PPP YA   A  +  L+E  K++     S       K  HRKE+ EK KEKK +                 K+K+  +Q     K    E+EQ
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQ

Query:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRD---AKLQPNEDSKP--GKIIRIKLASSLSNQEDSSADTQQTCSTSG
        LEKS LTEE  QP      GYLSDG+Q + KR+R+   A ++    + P  GK +RI++      + ++       CSTSG
Subjt:  LEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRD---AKLQPNEDSKP--GKIIRIKLASSLSNQEDSSADTQQTCSTSG

AT1G75860.1 unknown protein2.9e-1229.76Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKEC-AKQAKDRLKGTKVEAE
        MSR    PP  +A      +  L+ES KL+     SK   + EK    KE+ EK KEKK+ ++E+  K S     N  K     +K+  D       E++
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKEC-AKQAKDRLKGTKVEAE

Query:  QLEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNED-----SKPGKIIRIKLASSLSNQEDSSADTQQ-TCSTSGRYDCVDQKRDENSRGPN
         LEKSGLT+E  +P   +  GYLSDG+Q + KR RD      E         GK +RI++      +E  +   +   CST+       Q    +S    
Subjt:  QLEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDAKLQPNED-----SKPGKIIRIKLASSLSNQEDSSADTQQ-TCSTSGRYDCVDQKRDENSRGPN

Query:  QQKPCFTDSNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEE---WLFGTRKQDGQTTKATT
              + S T    +  P        S S+ A+ + + +        + RS  E +Y ALF+ W PP + +     ++    WLFG + Q+    KA  
Subjt:  QQKPCFTDSNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEE---WLFGTRKQDGQTTKATT

Query:  NKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF
         K           S WPR Q+L +  +YSLPYT+PF
Subjt:  NKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF

AT4G35940.2 unknown protein4.3e-0827.23Show/hide
Query:  MSRCFPYPPPGYAGKVARTEAALIESIK---LQSERQQSKHDRKKEK--SKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRL--KG
        MSRCFP+PPPGY     R EA ++ SIK    +++++Q + DR+ +K   K +KER EK ++K+++RKER+ K   S +    K++     AK  L  K 
Subjt:  MSRCFPYPPPGYAGKVARTEAALIESIK---LQSERQQSKHDRKKEK--SKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRL--KG

Query:  TKVEAEQLEKSGLT---------------------------EEHGQP-------------VWPQSPGYLSDGTQINHKRKRDAKLQP-----NEDSKPGK
         + E   LEKS LT                           +E  QP             V  Q P    DG   N+  KR  K QP     N +++   
Subjt:  TKVEAEQLEKSGLT---------------------------EEHGQP-------------VWPQSPGYLSDGTQINHKRKRDAKLQP-----NEDSKPGK

Query:  IIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDE-----NSRGPNQQK------PCFTDSNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVV
          +  L    +N  +   + QQ    +GR++  ++KR E     N R  N++K      P     N   + E A  KPR  +  R     +    +  + 
Subjt:  IIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDE-----NSRGPNQQK------PCFTDSNTVVAVEEAPPKPRIKDHSRSVHAVKDIRPQGNVV

Query:  PFPTR-TRSPAES----------EYEALFEKWIPPPLQLEQQM---DDEEWLFGTRKQDGQTTKATTN-KAFSPVPSCRSSSLWPRGQYLPDADVYSLPY
           TR T  P +S          ++  + E W+P  ++    +   +DEE  +  +K    TT+        + +    ++  WP  + LP+ADVY+LPY
Subjt:  PFPTR-TRSPAES----------EYEALFEKWIPPPLQLEQQM---DDEEWLFGTRKQDGQTTKATTN-KAFSPVPSCRSSSLWPRGQYLPDADVYSLPY

Query:  TIPF
        T+PF
Subjt:  TIPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGCGGGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAATCGATTAAGCTCCAATCTGAAAGACAACAGAGCAA
GCATGATAGGAAGAAAGAGAAAAGTAAGCACAGGAAAGAGAGGAGTGAGAAGAGTAAGGAAAAGAAACAGAGAAGAAAAGAACGTAAAGAGAAATCTTCTCGTAGCTGTG
ACTTGAATGATCAGAAACAAAAGGAATGCGCTAAACAAGCCAAGGACCGGCTAAAGGGAACCAAAGTTGAAGCGGAACAATTAGAAAAGAGTGGCCTTACTGAGGAGCAT
GGACAACCAGTATGGCCTCAGAGCCCTGGCTATTTGTCTGACGGAACTCAGATCAACCACAAGAGGAAAAGGGATGCTAAATTACAGCCTAATGAAGATTCTAAACCTGG
AAAAATCATCCGGATTAAGCTGGCTTCTTCACTGAGCAACCAAGAGGATTCCTCAGCTGATACACAACAGACGTGTTCTACATCTGGACGCTATGATTGTGTTGATCAGA
AGAGGGATGAAAATAGCCGTGGACCCAATCAGCAAAAACCTTGCTTCACCGATTCTAACACAGTTGTAGCTGTTGAGGAGGCTCCTCCTAAACCTCGGATCAAAGATCAT
TCTCGTTCAGTTCATGCTGTCAAGGACATTCGTCCGCAGGGTAATGTTGTGCCATTCCCTACTCGCACCAGAAGTCCTGCAGAATCCGAATATGAAGCTCTGTTTGAGAA
GTGGATTCCACCCCCGCTTCAGTTGGAGCAACAAATGGACGATGAAGAATGGCTCTTTGGGACAAGAAAGCAGGATGGACAAACCACGAAGGCAACCACCAACAAAGCTT
TCAGTCCGGTTCCCAGCTGCAGAAGTTCCAGTCTGTGGCCGAGAGGACAGTATCTGCCAGATGCTGATGTCTATTCATTGCCTTACACGATCCCATTT
mRNA sequenceShow/hide mRNA sequence
ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGCGGGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAATCGATTAAGCTCCAATCTGAAAGACAACAGAGCAA
GCATGATAGGAAGAAAGAGAAAAGTAAGCACAGGAAAGAGAGGAGTGAGAAGAGTAAGGAAAAGAAACAGAGAAGAAAAGAACGTAAAGAGAAATCTTCTCGTAGCTGTG
ACTTGAATGATCAGAAACAAAAGGAATGCGCTAAACAAGCCAAGGACCGGCTAAAGGGAACCAAAGTTGAAGCGGAACAATTAGAAAAGAGTGGCCTTACTGAGGAGCAT
GGACAACCAGTATGGCCTCAGAGCCCTGGCTATTTGTCTGACGGAACTCAGATCAACCACAAGAGGAAAAGGGATGCTAAATTACAGCCTAATGAAGATTCTAAACCTGG
AAAAATCATCCGGATTAAGCTGGCTTCTTCACTGAGCAACCAAGAGGATTCCTCAGCTGATACACAACAGACGTGTTCTACATCTGGACGCTATGATTGTGTTGATCAGA
AGAGGGATGAAAATAGCCGTGGACCCAATCAGCAAAAACCTTGCTTCACCGATTCTAACACAGTTGTAGCTGTTGAGGAGGCTCCTCCTAAACCTCGGATCAAAGATCAT
TCTCGTTCAGTTCATGCTGTCAAGGACATTCGTCCGCAGGGTAATGTTGTGCCATTCCCTACTCGCACCAGAAGTCCTGCAGAATCCGAATATGAAGCTCTGTTTGAGAA
GTGGATTCCACCCCCGCTTCAGTTGGAGCAACAAATGGACGATGAAGAATGGCTCTTTGGGACAAGAAAGCAGGATGGACAAACCACGAAGGCAACCACCAACAAAGCTT
TCAGTCCGGTTCCCAGCTGCAGAAGTTCCAGTCTGTGGCCGAGAGGACAGTATCTGCCAGATGCTGATGTCTATTCATTGCCTTACACGATCCCATTT
Protein sequenceShow/hide protein sequence
MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERSEKSKEKKQRRKERKEKSSRSCDLNDQKQKECAKQAKDRLKGTKVEAEQLEKSGLTEEH
GQPVWPQSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSGRYDCVDQKRDENSRGPNQQKPCFTDSNTVVAVEEAPPKPRIKDH
SRSVHAVKDIRPQGNVVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFGTRKQDGQTTKATTNKAFSPVPSCRSSSLWPRGQYLPDADVYSLPYTIPF