; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016919 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016919
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionComplex 1 LYR protein
Genome locationscaffold9_1:1069151..1069621
RNA-Seq ExpressionMS016919
SyntenyMS016919
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029455.1 hypothetical protein SDJN02_07794, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-7085.71Show/hide
Query:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV
        M++RLV KC+ LS HK+FLACNKIG+HPR LHNGPDTIDELLDRHVVKKEKSF+D+++ELITQR LTSTRREALSLYRDI+RATRFFMWPDSRGVLWRDV
Subjt:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGG
        LR+NARKEFE+AR+E+DPE+VTRLLIGGRDAVQSALDKLAEKQ QEIDKKQ GG
Subjt:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGG

XP_022144304.1 uncharacterized protein LOC111014019 [Momordica charantia]7.0e-83100Show/hide
Query:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV
        MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV
Subjt:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQS
        LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQS
Subjt:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQS

XP_022961619.1 uncharacterized protein LOC111462339 [Cucurbita moschata]5.2e-7084.62Show/hide
Query:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV
        M++RLV KC+ LS HK+FLACNK+GFHPR+LHNGPDTIDELLDRHVVKKEKSF+D+++ELITQR LTSTRREALSLYRDI+RATRFFMWPDSRGVLWRDV
Subjt:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ
        LR+NARKEFE+AR+E+DPE+VTRLLIGGRDAVQSALDKLAEKQ QEIDKKQ G D+
Subjt:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ

XP_031736624.1 uncharacterized protein LOC101214249 [Cucumis sativus]5.7e-6986.62Show/hide
Query:  MTIRLVGKCLNL-SIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRD
        MT+RLVGK LNL SIHK+FL C+KIGFHPRVLHNGPDT++ELLDRHVVKKEK F+DEDD+LITQR LT+TRREALSLYRDI+RATRFFMWPDSRGVLWRD
Subjt:  MTIRLVGKCLNL-SIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ
        VLRENARKEFE+AR ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ G DQ
Subjt:  VLRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ

XP_038884246.1 uncharacterized protein LOC120075144 [Benincasa hispida]1.7e-7390.26Show/hide
Query:  IRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLR
        +RLVGKCLNLSIHK+FL CNKIGFHPRVLHNGPDT+ ELLDRHVVKKEKSF+DE+DELITQR LT+TRREALSLYRDI+RATRFFMWPDSRGVLWRDVLR
Subjt:  IRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLR

Query:  ENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ
        +NARKEFE+ARYESDPE+VTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ+G DQ
Subjt:  ENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ

TrEMBL top hitse value%identityAlignment
A0A0A0LMK5 Uncharacterized protein2.8e-6986.62Show/hide
Query:  MTIRLVGKCLNL-SIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRD
        MT+RLVGK LNL SIHK+FL C+KIGFHPRVLHNGPDT++ELLDRHVVKKEK F+DEDD+LITQR LT+TRREALSLYRDI+RATRFFMWPDSRGVLWRD
Subjt:  MTIRLVGKCLNL-SIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ
        VLRENARKEFE+AR ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ G DQ
Subjt:  VLRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ

A0A5A7VCD6 Complex 1 LYR protein4.4e-6784.08Show/hide
Query:  MTIRLVGKCLNL-SIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRD
        MT+RLVGK LNL SI K+FL C+KIGFHPRVLHNGPDT++ELLDRHVVKKEKS +D+ D+LITQR LTSTRREALSLYRDI+RATRFFMWPDS+GVLWRD
Subjt:  MTIRLVGKCLNL-SIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ
        VLR+NARKEFE+AR+ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ G DQ
Subjt:  VLRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ

A0A6J1CRY1 uncharacterized protein LOC1110140193.4e-83100Show/hide
Query:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV
        MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV
Subjt:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQS
        LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQS
Subjt:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQS

A0A6J1HEL0 uncharacterized protein LOC1114623392.5e-7084.62Show/hide
Query:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV
        M++RLV KC+ LS HK+FLACNK+GFHPR+LHNGPDTIDELLDRHVVKKEKSF+D+++ELITQR LTSTRREALSLYRDI+RATRFFMWPDSRGVLWRDV
Subjt:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ
        LR+NARKEFE+AR+E+DPE+VTRLLIGGRDAVQSALDKLAEKQ QEIDKKQ G D+
Subjt:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ

A0A6J1K786 uncharacterized protein LOC1114922893.6e-6983.33Show/hide
Query:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV
        M++RLV KC+ LS HK+FLACNK G+HPR LHNGPDTIDELLD HVVKKEKSF+D+++ELITQR LTSTRRE+LSLYRDI+RATRFFMWPDSRGVLWRDV
Subjt:  MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ
        LR+NARKEFE+AR+E+DPE+VTRLLIGGRDAVQSALDKLAEKQ QEIDKKQ GGD+
Subjt:  LRENARKEFEEARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76060.1 LYR family of Fe/S cluster biogenesis protein4.3e-4672.22Show/hide
Query:  RVLHNGPDTIDELLDRHVVKKEKSFNDEDD-ELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLRENARKEFEEARYESDPEVVTRLLIG
        R LH GPDT++ELL+RH+ KKEK   D D+ E + +R LTSTRREALSLYRDI+RATRFF W DSRG LWRDVLRENARKEFE AR+E+DPEV+TRLLIG
Subjt:  RVLHNGPDTIDELLDRHVVKKEKSFNDEDD-ELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLRENARKEFEEARYESDPEVVTRLLIG

Query:  GRDAVQSALDKLAEKQMQEIDKKQHG
        G DAV SALDKLAEKQ + I+K++ G
Subjt:  GRDAVQSALDKLAEKQMQEIDKKQHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATCAGGTTGGTGGGAAAATGCCTAAATCTGTCAATTCATAAGCATTTTTTGGCTTGCAACAAAATTGGTTTCCACCCTCGAGTTTTGCATAACGGTCCAGACAC
GATTGATGAACTTTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTTAATGATGAAGATGATGAATTGATAACTCAGCGACACCTCACCAGCACTCGGCGTGAGGCTC
TAAGTCTCTACCGAGACATCATCCGTGCGACTCGATTCTTTATGTGGCCAGATTCTCGAGGTGTCCTGTGGCGAGATGTTCTCAGGGAGAATGCACGAAAGGAATTTGAG
GAAGCCCGGTATGAGTCTGATCCAGAAGTTGTGACCCGGCTGCTCATTGGTGGGCGCGATGCTGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGAT
TGATAAGAAACAACATGGTGGAGATCAATCG
mRNA sequenceShow/hide mRNA sequence
ATGACCATCAGGTTGGTGGGAAAATGCCTAAATCTGTCAATTCATAAGCATTTTTTGGCTTGCAACAAAATTGGTTTCCACCCTCGAGTTTTGCATAACGGTCCAGACAC
GATTGATGAACTTTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTTAATGATGAAGATGATGAATTGATAACTCAGCGACACCTCACCAGCACTCGGCGTGAGGCTC
TAAGTCTCTACCGAGACATCATCCGTGCGACTCGATTCTTTATGTGGCCAGATTCTCGAGGTGTCCTGTGGCGAGATGTTCTCAGGGAGAATGCACGAAAGGAATTTGAG
GAAGCCCGGTATGAGTCTGATCCAGAAGTTGTGACCCGGCTGCTCATTGGTGGGCGCGATGCTGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGAT
TGATAAGAAACAACATGGTGGAGATCAATCG
Protein sequenceShow/hide protein sequence
MTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDEDDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLRENARKEFE
EARYESDPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQHGGDQS