CuGenDBv2

Gene ID	MS016933
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	scaffold976:6863..7093
RNA-Seq Expression	MS016933
Synteny	MS016933
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

QBA68155.1 photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium dasytrichum]

4.0e-39

100

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

YP_009661179.1 photosystem I P700 apoprotein A2 [Amphilophium chocoense]

4.0e-39

100

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Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

YP_009662530.1 photosystem I P700 apoprotein A2 [Amphilophium lactiflorum]

4.0e-39

100

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Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

YP_009662617.1 photosystem I P700 apoprotein A2 [Amphilophium dolichoides]

4.0e-39

100

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Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

YP_009776565.1 photosystem I P700 apoprotein A2 [Phyllanthus amarus]

4.0e-39

100

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

TrEMBL top hits

e value

%identity

Alignment

A0A411EGX5 Photosystem I P700 chlorophyll a apoprotein A2

1.9e-39

100

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

A0A411EGX9 Photosystem I P700 chlorophyll a apoprotein A2

1.9e-39

100

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

A0A411EH24 Photosystem I P700 chlorophyll a apoprotein A2

1.9e-39

100

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

A0A411EH35 Photosystem I P700 chlorophyll a apoprotein A2

1.9e-39

100

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

A0A411EH45 Photosystem I P700 chlorophyll a apoprotein A2

1.9e-39

100

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

SwissProt top hits

e value

%identity

Alignment

A1EA07 Photosystem I P700 chlorophyll a apoprotein A2

1.2e-41

98.7

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAW+FLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

A4QJB4 Photosystem I P700 chlorophyll a apoprotein A2

1.2e-41

98.7

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAW+FLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

A4QJJ8 Photosystem I P700 chlorophyll a apoprotein A2

1.2e-41

98.7

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAW+FLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

Q33332 Photosystem I P700 chlorophyll a apoprotein A2

1.2e-41

98.7

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAW+FLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

Q85FM0 Photosystem I P700 chlorophyll a apoprotein A2

1.2e-41

98.7

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAW+FLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

8.2e-43

98.7

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAW+FLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

ATCG00350.1 Photosystem I, PsaA/PsaB protein

2.9e-16

50.65

Show/hide

Query:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA
        SS  + GWLRD+LW  +SQ+I  Y     +SLS +   FL  H VWA   MFL S RGYWQELIE++ WAH +  +A
Subjt:  SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

Sequences

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CDS sequence

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TCTTCCACTTATTTGATGGGATGGTTAAGAGATTATCTATGGTTAAACTCTTCACAACTTATCAATGGATATAATCCTTTTGGTATGAATAGTTTATCAGTCTGGGCGTG
GGTGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGCGGATATTGGCAAGAATTGATTGAAACTTTAGCATGGGCTCACGAACGCA
CACCTTTGGCT

mRNA sequence

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Protein sequence

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SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA

MS016933 (gene) of Bitter gourd (TR) v1 genome