; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016934 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016934
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionrRNA processing protein-related
Genome locationscaffold976:9502..10392
RNA-Seq ExpressionMS016934
SyntenyMS016934
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0034399 - nuclear periphery (cellular component)
InterPro domainsIPR008610 - Eukaryotic rRNA processing


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035578.1 putative rRNA-processing protein EBP2-like protein [Cucurbita argyrosperma subsp. argyrosperma]6.5e-13088.04Show/hide
Query:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE---EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFY
        MGV D+ DSFL+EDTMED+DLDSEDSDF SESE   EEEE VKLSEPSKNA+YNADGLLDKLGDISWPEN GWIH+LSLDIDQEKEVDVNDDLARELAFY
Subjt:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE---EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFY

Query:  TQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
        TQALQG RMA EKFQSLGLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEA+ERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
Subjt:  TQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS

Query:  GFAGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKR
        GF+  DKGGEMDL+FEDGK F+RS GKKRPGVSPGDRSGGK RHGGGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETT+DIR FN GSLSSNK+RK+
Subjt:  GFAGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKR

Query:  S
        S
Subjt:  S

XP_022155439.1 probable rRNA-processing protein EBP2 homolog [Momordica charantia]3.2e-13792.28Show/hide
Query:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE-EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQ
        MGV DK D FL+EDTME +DLDSEDSDFESES+ EE++ VKLSEPSK AI+NADGLLDKLGDISWPENAGWIH+LSLDIDQEKEVDVNDDLARELAFYTQ
Subjt:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE-EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQ

Query:  ALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
        ALQGARMAFEKFQSLGLPFLRP+DYYAEMVKTDTHMEKVKGRLLAEQRKMEEA+ERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
Subjt:  ALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF

Query:  AGGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS
        AGGDKGGEMDL FEDGK FERSGKKRPGVSPGDRSGGK RH GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETT+DIR FNKG+LSSNKKRKRS
Subjt:  AGGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS

XP_022156156.1 probable rRNA-processing protein EBP2 homolog [Momordica charantia]1.1e-15099.33Show/hide
Query:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESEEEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQA
        MGVLDKADSFLDEDTMEDEDLDSEDSDFESESEEEEE VKLSEPSKNAIYNADGLLDKLGD SWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQA
Subjt:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESEEEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQA

Query:  LQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFA
        LQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFA
Subjt:  LQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFA

Query:  GGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS
        GGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS
Subjt:  GGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS

XP_022958567.1 probable rRNA-processing protein EBP2 homolog [Cucurbita moschata]4.9e-13088.37Show/hide
Query:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE---EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFY
        MGV D+ DSFL+EDTMED+DLDSEDSDF SESE   EEEE VKLSEPSKNAIYNADGLLDKLGDISWPEN GWIH+LSLDIDQEKEVDVNDDLARELAFY
Subjt:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE---EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFY

Query:  TQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
        TQALQG RMA EKFQSLGLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEA+ERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
Subjt:  TQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS

Query:  GFAGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKR
        GF+  DKGGEMDL+FEDGK F+RS GKKRPGVSPGDRSGGK RHGGGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETT+DIR FN GSLSSNK+RK+
Subjt:  GFAGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKR

Query:  S
        S
Subjt:  S

XP_022995363.1 probable rRNA-processing protein EBP2 homolog [Cucurbita maxima]1.1e-12988.63Show/hide
Query:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE-EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQ
        MGV D+ DSF++EDTMED+DLDSEDSDF SESE EEEE VKLSEPSKNAIYNADGLLDKLGDISWPEN GWIH+LSLDIDQEKEVDVNDDLARELAFYTQ
Subjt:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE-EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQ

Query:  ALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
        ALQG RMA EKFQSLGLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEA+ERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
Subjt:  ALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF

Query:  AGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS
        +  DKGGEMDL FEDGK F+RS GKKRPGVSPGDRSGGK RHGGGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETT+DIR FN GSLSSNK+RK+S
Subjt:  AGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS

TrEMBL top hitse value%identityAlignment
A0A6J1DQA0 probable rRNA-processing protein EBP2 homolog1.5e-13792.28Show/hide
Query:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE-EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQ
        MGV DK D FL+EDTME +DLDSEDSDFESES+ EE++ VKLSEPSK AI+NADGLLDKLGDISWPENAGWIH+LSLDIDQEKEVDVNDDLARELAFYTQ
Subjt:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE-EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQ

Query:  ALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
        ALQGARMAFEKFQSLGLPFLRP+DYYAEMVKTDTHMEKVKGRLLAEQRKMEEA+ERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
Subjt:  ALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF

Query:  AGGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS
        AGGDKGGEMDL FEDGK FERSGKKRPGVSPGDRSGGK RH GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETT+DIR FNKG+LSSNKKRKRS
Subjt:  AGGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS

A0A6J1DTZ5 probable rRNA-processing protein EBP2 homolog5.5e-15199.33Show/hide
Query:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESEEEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQA
        MGVLDKADSFLDEDTMEDEDLDSEDSDFESESEEEEE VKLSEPSKNAIYNADGLLDKLGD SWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQA
Subjt:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESEEEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQA

Query:  LQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFA
        LQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFA
Subjt:  LQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFA

Query:  GGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS
        GGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS
Subjt:  GGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS

A0A6J1H264 probable rRNA-processing protein EBP2 homolog2.4e-13088.37Show/hide
Query:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE---EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFY
        MGV D+ DSFL+EDTMED+DLDSEDSDF SESE   EEEE VKLSEPSKNAIYNADGLLDKLGDISWPEN GWIH+LSLDIDQEKEVDVNDDLARELAFY
Subjt:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE---EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFY

Query:  TQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
        TQALQG RMA EKFQSLGLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEA+ERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
Subjt:  TQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS

Query:  GFAGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKR
        GF+  DKGGEMDL+FEDGK F+RS GKKRPGVSPGDRSGGK RHGGGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETT+DIR FN GSLSSNK+RK+
Subjt:  GFAGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKR

Query:  S
        S
Subjt:  S

A0A6J1IZU9 probable rRNA-processing protein EBP2 homolog4.2e-12787Show/hide
Query:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE--EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYT
        MGV DK   FL+EDTME++DL +EDSDFESESE  EEEE VKLSEPSK AIYNADGLLDKL DISWP+N  WIHRL LDIDQEKEVDVNDDLARELAFYT
Subjt:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE--EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYT

Query:  QALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSG
        QALQG RMA EKFQSLGLPFLRP+DYYAEMVKTDTHM KVKGRLLAEQRKMEEA+ERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSG
Subjt:  QALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSG

Query:  FAGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS
        FAGGDKGGEM+L+FEDGK FERS GKKRPGVSPGDRSGGK RH  GGKGKN KKK+DFRDSKFGFGGRKSLKKQNTAETT+DIR FN  SL SNK+RKRS
Subjt:  FAGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS

A0A6J1K7Q8 probable rRNA-processing protein EBP2 homolog5.3e-13088.63Show/hide
Query:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE-EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQ
        MGV D+ DSF++EDTMED+DLDSEDSDF SESE EEEE VKLSEPSKNAIYNADGLLDKLGDISWPEN GWIH+LSLDIDQEKEVDVNDDLARELAFYTQ
Subjt:  MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE-EEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQ

Query:  ALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
        ALQG RMA EKFQSLGLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEA+ERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
Subjt:  ALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF

Query:  AGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS
        +  DKGGEMDL FEDGK F+RS GKKRPGVSPGDRSGGK RHGGGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETT+DIR FN GSLSSNK+RK+S
Subjt:  AGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS

SwissProt top hitse value%identityAlignment
O13802 Probable rRNA-processing protein ebp29.1e-1831.38Show/hide
Query:  EDLDSEDSDFESESEEEE-----EGVKLSEPS------KNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVD-VNDDLARELAFYTQALQGARM
        E  D+ D + ESE  +E      EG++L E +      K AI N   L +    I +P++  ++   ++   +   ++ V DDLARELAFY Q +   + 
Subjt:  EDLDSEDSDFESESEEEE-----EGVKLSEPS------KNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVD-VNDDLARELAFYTQALQGARM

Query:  AFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGG
        AF K +   +   RP DY+AEM+K+D HMEKV+  L+ E    + + + +K RE K+  K++Q  K +ER ++KKE +E +   +++       GG    
Subjt:  AFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGG

Query:  EMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKR
          DLT ED      S         G RS  K+R         P  KR  ++ K+GFGG K   K N  ++ +   +F +  L + K +KR
Subjt:  EMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKR

P36049 rRNA-processing protein EBP21.4e-1829.37Show/hide
Query:  DSFLDEDTMEDEDLDSEDSDFESESEEEEEGVKLSEPS-----------KNAIYNADGLLDKLG--DISWPENAGWIHR-LSLDIDQEKEV-DVNDDLAR
        DS  + D+ EDED+ +++   E E +EEE+ V LS+             K  + N   +   L    + W +++   H+ ++ + + ++ + D+ DD  R
Subjt:  DSFLDEDTMEDEDLDSEDSDFESESEEEEEGVKLSEPS-----------KNAIYNADGLLDKLG--DISWPENAGWIHR-LSLDIDQEKEV-DVNDDLAR

Query:  ELAFYTQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRK
        ELAFY Q+L    +A ++ + L +PF RP DY+AEMVK+D HM+K+KG+L+ E    +  +E R+ R+ K+  K++Q   L++R  +K+E +E +K  + 
Subjt:  ELAFYTQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRK

Query:  QRQKSGFAGGDKGGEMDLT-FEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSN
        +R         K  E+D + F  G   E  GK+       DR               P  KR  +++K+G GG K  K++N A +++D+  F+   +   
Subjt:  QRQKSGFAGGDKGGEMDLT-FEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSN

Query:  KKR
          R
Subjt:  KKR

Q09958 Probable rRNA-processing protein EBP2 homolog9.1e-1831.29Show/hide
Query:  DSFLDEDTMEDEDLDSEDSDFESESEEEE---------EGVKLSEPSKNAIYNADG-LLDKLGDISWPENAGWIHRLSL---DIDQEKEVDVNDDLAREL
        D+ ++E  ME  D++  +SD + +  E +         +G+ +    K  I N    + +KL +I+  ++  W+  L +     + +K+V+ NDD  REL
Subjt:  DSFLDEDTMEDEDLDSEDSDFESESEEEE---------EGVKLSEPSKNAIYNADG-LLDKLGDISWPENAGWIHRLSL---DIDQEKEVDVNDDLAREL

Query:  AFYTQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRK--
         FY QA +  ++A+ +  +LG+  LRP DYYAEM K+DTHM+KV+ RLL  Q   E  +  R+ RE K+ A ++Q + L  +  +KK   E+VKK +K  
Subjt:  AFYTQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRK--

Query:  QRQKSGFAGGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKN------PKKKRDFRDSKFGFGGRKSLKKQNTAETTSDI
        ++Q        K   +D                P  + GDR GG+   G GG G+        + KR  +  KFG+GG+K   K+N  E+ +D+
Subjt:  QRQKSGFAGGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKN------PKKKRDFRDSKFGFGGRKSLKKQNTAETTSDI

Q9I8J6 Probable rRNA-processing protein EBP25.9e-1727.72Show/hide
Query:  EDEDLDSEDSDFESESEEEEE------------GVK-LSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDID--------------QEKEVDVNDD
        EDE     DSDF++    ++E            G+  + E  K    +A GL   L D+       W+ RL + +D                 +++  DD
Subjt:  EDEDLDSEDSDFESESEEEEE------------GVK-LSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDID--------------QEKEVDVNDD

Query:  LARELAFYTQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKK
          RE+ FY QA      +  + + L +   RP DY+AEM KTD HM+K++ +L  +Q  ME++++ ++ R  ++  K++Q + L++R K+K   +  +KK
Subjt:  LARELAFYTQALQGARMAFEKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKK

Query:  WRKQRQKSGFAGGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLS
        ++            KG    L F +G   +++ KK P  + G  +  K ++        P  KR ++D KFGFGG+K   K NT  + +D+  F +GS++
Subjt:  WRKQRQKSGFAGGDKGGEMDLTFEDGKTFERSGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLS

Query:  SNK
          K
Subjt:  SNK

Q9LUJ5 Probable rRNA-processing protein EBP2 homolog1.5e-8163.45Show/hide
Query:  DEDTMEDEDLDSEDSDFESESEEEEEG---VKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQALQGARMAF
        DE  M DED D+ DS+ ES S+ + E     KL+EP+K AIYN DGLLDKL DISWPE+  W H+L+++IDQ   VDVNDDLARE AFYTQAL+G R AF
Subjt:  DEDTMEDEDLDSEDSDFESESEEEEEG---VKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQALQGARMAF

Query:  EKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEM
         K   +G+ FLRPA+YYAEMVK+D HMEKVK RLL E++++EE++ERRKAR+ KR+AKE+Q+QK+KERAK+KK+ IESVKKWRKQRQ+SGF+  DK GE 
Subjt:  EKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEM

Query:  DLTFEDGKTFER-SGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIR-DFNKGSLSSNKKRKR
        +L FE GK+F+R  GKKRPGVSPGDRSGGK    G    +   KKR+FRDSKFG GGRK L KQNTAETT+D +  F  G  S NK++KR
Subjt:  DLTFEDGKTFER-SGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIR-DFNKGSLSSNKKRKR

Arabidopsis top hitse value%identityAlignment
AT3G22660.1 rRNA processing protein-related1.1e-8263.45Show/hide
Query:  DEDTMEDEDLDSEDSDFESESEEEEEG---VKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQALQGARMAF
        DE  M DED D+ DS+ ES S+ + E     KL+EP+K AIYN DGLLDKL DISWPE+  W H+L+++IDQ   VDVNDDLARE AFYTQAL+G R AF
Subjt:  DEDTMEDEDLDSEDSDFESESEEEEEG---VKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQALQGARMAF

Query:  EKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEM
         K   +G+ FLRPA+YYAEMVK+D HMEKVK RLL E++++EE++ERRKAR+ KR+AKE+Q+QK+KERAK+KK+ IESVKKWRKQRQ+SGF+  DK GE 
Subjt:  EKFQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEM

Query:  DLTFEDGKTFER-SGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIR-DFNKGSLSSNKKRKR
        +L FE GK+F+R  GKKRPGVSPGDRSGGK    G    +   KKR+FRDSKFG GGRK L KQNTAETT+D +  F  G  S NK++KR
Subjt:  DLTFEDGKTFER-SGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIR-DFNKGSLSSNKKRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTATTAGATAAAGCTGATTCCTTCTTAGATGAGGATACAATGGAAGATGAGGATCTTGATAGTGAGGATTCTGATTTTGAATCTGAATCCGAAGAAGAAGAAGA
AGGTGTGAAATTGTCTGAACCATCAAAGAATGCAATATATAATGCAGACGGTCTCCTCGATAAGCTTGGAGATATTAGCTGGCCGGAAAATGCGGGATGGATACACAGGC
TATCTCTTGATATTGATCAAGAAAAAGAGGTGGATGTGAATGATGATCTAGCTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGGGCAAGAATGGCCTTTGAGAAG
TTCCAATCTTTAGGACTCCCGTTTCTCAGACCTGCAGACTATTATGCTGAGATGGTGAAGACAGATACTCACATGGAGAAAGTGAAGGGTCGGCTGCTGGCCGAGCAGAG
AAAGATGGAGGAGGCCGACGAAAGAAGGAAGGCTAGAGAAGCGAAGAGGTTAGCTAAAGAGATACAAGCTCAGAAGCTAAAGGAGAGGGCTAAGCAGAAGAAAGAAGAGA
TTGAATCCGTCAAGAAATGGAGGAAGCAGAGGCAAAAGAGTGGCTTTGCTGGAGGCGATAAAGGGGGCGAGATGGACTTAACCTTTGAAGATGGAAAGACATTTGAGAGG
TCCGGTAAGAAGAGGCCAGGGGTGTCTCCAGGCGACCGCTCGGGAGGGAAGACAAGACATGGAGGAGGTGGAAAGGGGAAAAATCCGAAGAAGAAGAGAGACTTCAGAGA
TTCCAAGTTCGGATTCGGCGGGAGGAAGAGTTTGAAAAAGCAGAACACAGCTGAGACAACAAGTGATATTAGGGACTTCAACAAAGGAAGTTTGTCAAGTAACAAAAAGA
GAAAGAGATCA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTATTAGATAAAGCTGATTCCTTCTTAGATGAGGATACAATGGAAGATGAGGATCTTGATAGTGAGGATTCTGATTTTGAATCTGAATCCGAAGAAGAAGAAGA
AGGTGTGAAATTGTCTGAACCATCAAAGAATGCAATATATAATGCAGACGGTCTCCTCGATAAGCTTGGAGATATTAGCTGGCCGGAAAATGCGGGATGGATACACAGGC
TATCTCTTGATATTGATCAAGAAAAAGAGGTGGATGTGAATGATGATCTAGCTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGGGCAAGAATGGCCTTTGAGAAG
TTCCAATCTTTAGGACTCCCGTTTCTCAGACCTGCAGACTATTATGCTGAGATGGTGAAGACAGATACTCACATGGAGAAAGTGAAGGGTCGGCTGCTGGCCGAGCAGAG
AAAGATGGAGGAGGCCGACGAAAGAAGGAAGGCTAGAGAAGCGAAGAGGTTAGCTAAAGAGATACAAGCTCAGAAGCTAAAGGAGAGGGCTAAGCAGAAGAAAGAAGAGA
TTGAATCCGTCAAGAAATGGAGGAAGCAGAGGCAAAAGAGTGGCTTTGCTGGAGGCGATAAAGGGGGCGAGATGGACTTAACCTTTGAAGATGGAAAGACATTTGAGAGG
TCCGGTAAGAAGAGGCCAGGGGTGTCTCCAGGCGACCGCTCGGGAGGGAAGACAAGACATGGAGGAGGTGGAAAGGGGAAAAATCCGAAGAAGAAGAGAGACTTCAGAGA
TTCCAAGTTCGGATTCGGCGGGAGGAAGAGTTTGAAAAAGCAGAACACAGCTGAGACAACAAGTGATATTAGGGACTTCAACAAAGGAAGTTTGTCAAGTAACAAAAAGA
GAAAGAGATCA
Protein sequenceShow/hide protein sequence
MGVLDKADSFLDEDTMEDEDLDSEDSDFESESEEEEEGVKLSEPSKNAIYNADGLLDKLGDISWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQALQGARMAFEK
FQSLGLPFLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMDLTFEDGKTFER
SGKKRPGVSPGDRSGGKTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS