; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016935 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016935
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein TIC 214
Genome locationscaffold976:12830..12928
RNA-Seq ExpressionMS016935
SyntenyMS016935
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024027079.1 LOW QUALITY PROTEIN: uncharacterized protein LOC112093245 [Morus notabilis]8.0e-0587.88Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFNYFILPSS+LVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
YP_009264001.1 hypothetical chloroplast RF1 [Dactyladenia buchneri]1.4e-0487.88Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFN+FILPSSILVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
YP_009731279.1 hypothetical protein RF1 [Plumeria rubra]1.0e-0487.88Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFNYFILPSSIL RLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
YP_010134726.1 hypothetical protein RF1 [Sanguisorba hakusanensis]8.0e-0587.88Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        LNNLSIQC+ LNNLIFQLFN+FILPSS+LVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
YP_010134738.1 hypothetical protein RF1 [Sanguisorba hakusanensis]8.0e-0587.88Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        LNNLSIQC+ LNNLIFQLFN+FILPSS+LVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
TrEMBL top hitse value%identityAlignment
A0A023SXR1 Protein TIC 2146.6e-0587.88Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFN+FILPSSILVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
A0A191VP44 Protein TIC 2146.6e-0587.88Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFN+FILPSSILVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
A0A223A7J4 Protein TIC 2146.6e-0587.88Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFN+FILPSSILVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
A0A223A8U3 Protein TIC 2146.6e-0587.88Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFN+FILPSSILVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
A0A6B9WDN2 Protein TIC 2145.0e-0587.88Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFNYFILPSSIL RLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
SwissProt top hitse value%identityAlignment
A0A393 Protein TIC 2143.0e-0784.85Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFNYFILPSS+L RLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
Q09WW0 Protein TIC 2144.0e-0784.85Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFN+FILPSS+LVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
Q14FA0 Protein TIC 2144.0e-0784.85Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFN+FILPSS+LVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
Q4VZL0 Protein TIC 2144.0e-0784.85Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFN+FILPSS+LVRLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
Q9M3J5 Protein TIC 2143.0e-0784.85Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NLSIQCV LNNLIFQLFNYFILPSS+L RLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
Arabidopsis top hitse value%identityAlignment
AT2G07739.1 Ycf1 protein2.9e-0569.7Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NL IQCV  NNLIF+LFN+ ILPSS+L RLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
ATCG01000.1 Ycf1 protein3.1e-0778.79Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NL IQCV LNNLIFQLFN+FILPSS+L RLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
ATCG01130.1 Ycf1 protein3.1e-0778.79Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NL IQCV LNNLIFQLFN+FILPSS+L RLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
ATMG00370.1 Ycf1 protein2.9e-0569.7Show/hide
Query:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV
        + NL IQCV  NNLIF+LFN+ ILPSS+L RLV
Subjt:  LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGAATAATCTTAGCATTCAATGTGTAATCTTGAATAATCTCATTTTTCAATTATTCAACTATTTCATTTTACCAAGTTCAATATTAGTCAGATTAGTC
mRNA sequenceShow/hide mRNA sequence
CTGAATAATCTTAGCATTCAATGTGTAATCTTGAATAATCTCATTTTTCAATTATTCAACTATTTCATTTTACCAAGTTCAATATTAGTCAGATTAGTC
Protein sequenceShow/hide protein sequence
LNNLSIQCVILNNLIFQLFNYFILPSSILVRLV