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MS016936 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016936
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold976:19213..19407
RNA-Seq ExpressionMS016936
SyntenyMS016936
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein4.9e-0462.86Show/hide
Query:  FSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN
        F KKCKFFIW +IH  INT D+LQ+R+P+  L+PN
Subjt:  FSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN
A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein4.9e-0462.86Show/hide
Query:  FSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN
        F KKCKFFIW +IH  INT D+LQ+R+P+  L+PN
Subjt:  FSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN
A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein4.9e-0462.86Show/hide
Query:  FSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN
        F KKCKFFIW +IH  INT D+LQ+R+P+  L+PN
Subjt:  FSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN
A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein4.9e-0462.86Show/hide
Query:  FSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN
        F KKCKFFIW +IH  INT D+LQ+R+P+  L+PN
Subjt:  FSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN
A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein4.9e-0462.86Show/hide
Query:  FSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN
        F KKCKFFIW +IH  INT D+LQ+R+P+  L+PN
Subjt:  FSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTATACTGATAGTTTTTATGCGATTGATGCTCAATCGACTCTTTTCTGTTTTGATATTTCTGCAATTGCTGCTAAATTATGGACCTTCATTCTCAAAAAAGTGTAAATT
TTTCATATGGTGTATCATCCATCGTGGTATCAATACATATGACAAATTACAGCAGAGAATTCCATCTATGCACTTGAACCCCAAC
mRNA sequenceShow/hide mRNA sequence
TTTATACTGATAGTTTTTATGCGATTGATGCTCAATCGACTCTTTTCTGTTTTGATATTTCTGCAATTGCTGCTAAATTATGGACCTTCATTCTCAAAAAAGTGTAAATT
TTTCATATGGTGTATCATCCATCGTGGTATCAATACATATGACAAATTACAGCAGAGAATTCCATCTATGCACTTGAACCCCAAC
Protein sequenceShow/hide protein sequence
FILIVFMRLMLNRLFSVLIFLQLLLNYGPSFSKKCKFFIWCIIHRGINTYDKLQQRIPSMHLNPN