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MS016938 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016938
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSubunits of heterodimeric actin filament capping protein Capz superfamily
Genome locationscaffold976:32875..32970
RNA-Seq ExpressionMS016938
SyntenyMS016938
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA0381437.1 unnamed protein product [Arabidopsis thaliana]2.0e-0580.65Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTELLKTILQ
        SVAGNRTRVSWVKARYPNRWTTT++L  +L+
Subjt:  SVAGNRTRVSWVKARYPNRWTTTELLKTILQ
CAG7890909.1 unnamed protein product [Brassica rapa]2.9e-0492.31Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTELL
        S AGNRTRVSWVKARYPNRWTT+ELL
Subjt:  SVAGNRTRVSWVKARYPNRWTTTELL
EOA32550.1 hypothetical protein CARUB_v10015839mg [Capsella rubella]1.0e-0488.46Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTELL
        SVAGNRTRVSWVKARYPNRWTTT+++
Subjt:  SVAGNRTRVSWVKARYPNRWTTTELL
KAF1861610.1 hypothetical protein Lal_00025994 [Lupinus albus]2.2e-0492Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTEL
        SVAGNRTRV WVKARYPNRWTTTE+
Subjt:  SVAGNRTRVSWVKARYPNRWTTTEL
NP_001154593.1 Subunits of heterodimeric actin filament capping protein Capz superfamily [Arabidopsis thaliana]2.0e-0580.65Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTELLKTILQ
        SVAGNRTRVSWVKARYPNRWTTT++L  +L+
Subjt:  SVAGNRTRVSWVKARYPNRWTTTELLKTILQ
TrEMBL top hitse value%identityAlignment
A0A5S9XAG8 F-actin-capping protein subunit alpha9.8e-0680.65Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTELLKTILQ
        SVAGNRTRVSWVKARYPNRWTTT++L  +L+
Subjt:  SVAGNRTRVSWVKARYPNRWTTTELLKTILQ
A0A6A5LQ26 RING-type domain-containing protein1.1e-0492Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTEL
        SVAGNRTRV WVKARYPNRWTTTE+
Subjt:  SVAGNRTRVSWVKARYPNRWTTTEL
F4J7C4 Subunits of heterodimeric actin filament capping protein Capz superfamily9.8e-0680.65Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTELLKTILQ
        SVAGNRTRVSWVKARYPNRWTTT++L  +L+
Subjt:  SVAGNRTRVSWVKARYPNRWTTTELLKTILQ
G7KCW7 Uncharacterized protein1.4e-0488.46Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTELL
        S+AGNRTRVSWVKARYPNRWTT E L
Subjt:  SVAGNRTRVSWVKARYPNRWTTTELL
R0I3P6 F-actin-capping protein subunit alpha4.9e-0588.46Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTELL
        SVAGNRTRVSWVKARYPNRWTTT+++
Subjt:  SVAGNRTRVSWVKARYPNRWTTTELL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05520.2 Subunits of heterodimeric actin filament capping protein Capz superfamily1.9e-0980.65Show/hide
Query:  SVAGNRTRVSWVKARYPNRWTTTELLKTILQ
        SVAGNRTRVSWVKARYPNRWTTT++L  +L+
Subjt:  SVAGNRTRVSWVKARYPNRWTTTELLKTILQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCGTTGCCGGGAATCGAACCCGGGTCTCCTGGGTGAAAGCCAGATATCCTAACCGCTGGACGACAACGGAATTATTGAAAACCATATTACAAGTA
mRNA sequenceShow/hide mRNA sequence
TCCGTTGCCGGGAATCGAACCCGGGTCTCCTGGGTGAAAGCCAGATATCCTAACCGCTGGACGACAACGGAATTATTGAAAACCATATTACAAGTA
Protein sequenceShow/hide protein sequence
SVAGNRTRVSWVKARYPNRWTTTELLKTILQV