; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016942 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016942
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionribosome production factor 1-like
Genome locationscaffold976:76046..79575
RNA-Seq ExpressionMS016942
SyntenyMS016942
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]9.0e-17394.59Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVH NLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKKEADSK  SKD KGEKVP+QKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]2.5e-18398.8Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNKRDIIPSMIKNKEKRKEVH NLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        HTLPKVLITTCRFNS+IGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
        TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIFDSKENKKEADSKSNSKDAKGEKVP+QKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]2.3e-18499.7Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNKRDIIPSMIKNKEKRKEVH NLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
        TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]3.2e-17092.79Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  I+PS IKNKEKR EVH NLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPK+LITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNP
Subjt:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKKEADSK  SK  KGEKVP+QKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]5.9e-17293.69Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEE KN R IIPSMIKNKEKR EVH NLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKKEADSK  SKD KGEKVP+QKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein1.6e-17092.79Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  I+PS IKNKEKR EVH NLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPK+LITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNP
Subjt:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKKEADSK  SK  KGEKVP+QKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A1S3B854 ribosome production factor 1 isoform X14.4e-17394.59Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVH NLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKKEADSK  SKD KGEKVP+QKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A5A7UHC7 Ribosome production factor 1 isoform X14.4e-17394.59Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVH NLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKKEADSK  SKD KGEKVP+QKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DPH5 ribosome production factor 1-like1.1e-18499.7Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNKRDIIPSMIKNKEKRKEVH NLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
        TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DT48 ribosome production factor 1-like1.2e-18398.8Show/hide
Query:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNKRDIIPSMIKNKEKRKEVH NLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        HTLPKVLITTCRFNS+IGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HTLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
        TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIFDSKENKKEADSKSNSKDAKGEKVP+QKVIARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 18.5e-7349.38Show/hide
Query:  SMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF
        S IKNKE+R  +    KQQ++ EK   AK +   E++A  LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   + T PK+LITT   
Subjt:  SMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF

Query:  NSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Q6IQU6 Ribosome production factor 12.7e-7149.07Show/hide
Query:  SMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF
        S IKNK++R  +   LK++K+ +KR   K +   E++AL+  ++ PP+ +P+TIEN R  DET   P+DEE+      DEFS+   R T PKVLITT   
Subjt:  SMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF

Query:  NSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GRL  +LFP DP F GR+V TFHNQRDFIFFR HRYIF  K  KK                        +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK-PEMDTSRRRFFL
         GEYEWVHK  EMD+SRR+F L
Subjt:  GGEYEWVHK-PEMDTSRRRFFL

Q7TND5 Ribosome production factor 11.9e-7249.07Show/hide
Query:  SMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF
        S IKNK++R  +    KQQ++ EK   AK +   E++A  LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   R T PK+LITT   
Subjt:  SMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF

Query:  NSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIP++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Q8AVP1 Ribosome production factor 12.9e-7348.16Show/hide
Query:  SMIKNKEKRKEVHDNLKQQKKLEK----RKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLIT
        S IKNK++R+ +   LKQ+K+ EK    +KR K R+A       LG++ PP+ +P+TIEN R  DET   P DEE+      DEF+    + T PK+LIT
Subjt:  SMIKNKEKRKEVHDNLKQQKKLEK----RKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLIT

Query:  TCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV
        T          F  +L S+IPN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SL+P DP+F GR+V TFHNQRD+IFFR+HRY+F S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK-PEMDTSRRRFFL
        FDSK GEYEWVHK  EMDTSRR+F L
Subjt:  FDSKGGEYEWVHK-PEMDTSRRRFFL

Q9H9Y2 Ribosome production factor 11.9e-7249.07Show/hide
Query:  SMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF
        S IKNK++R  +    KQQ++ EK   AK +   E++A  LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   + T PK+LITT   
Subjt:  SMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRF

Query:  NSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein1.4e-3839.91Show/hide
Query:  PKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNP
        PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R DI   K+ G  
Subjt:  PKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK
            P L+  NFTT++G RVG +++ +FP  P    +R+VTF NQ D+I FR+H Y                    KGE  PK      L+E GPRF ++
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        L  ++ GT +    E EWV +P M+TS++R F+
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

AT4G01560.1 Ribosomal RNA processing Brix domain protein1.5e-13672.59Show/hide
Query:  GEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRH
        G EK+N   I+PSMIKNK+KR +V+   K +KKLEK+K+ +ARDA+EK+ALELGEEPP +MIP+TIENTRE DETVC+PDDEELFA  DADEF+ +++R 
Subjt:  GEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRH

Query:  TLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
          PKVL+TTCRFNST GP+ ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKNHGNPT
Subjt:  TLPKVLITTCRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKL
        SH+PELVL NFTTRLG RVGR  QSLFP DPNFRGRRVVTFHNQRDFIFFRHHRYIF++KE             +K +K  ++ +  RLQECGPRFT+KL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ++LQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGGAAAAAAAGAACAAGAGGGATATTATCCCATCAATGATAAAGAACAAGGAAAAGAGGAAAGAAGTGCACGACAACCTCAAGCAGCAGAAGAAGCTTGAGAA
ACGCAAGAGGGCCAAGGCTCGTGATGCTTCTGAAAAGCAAGCTCTTGAACTTGGAGAAGAACCTCCTCCCAGGATGATTCCTCGCACCATTGAGAACACCAGGGAGGTTG
ATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCAGGAAATGATGCCGATGAATTTAGTTCGATCATAAAGCGCCACACTTTGCCAAAAGTTCTGATAACTACT
TGTCGTTTTAACTCTACTATTGGACCTTCGTTTATATCAGAGTTGCTTTCAGTGATTCCAAATGCACATTACTACAAGAGGGGAACTAACGATTTGAAGAAGATTATAGA
ATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGGAAATTAGATGGCCTTCTAATTATTGGCTTGCCTGAGGGACCTACTGCCCATTTTA
AGATATCAAATGTTGTCTTACGAAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACTAACTTCACAACGCGCCTTGGTCTCCGTGTT
GGAAGGTTAATTCAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGGGTTGTAACTTTTCACAACCAACGGGACTTTATATTCTTCCGGCATCACCGTTACAT
TTTTGATAGCAAGGAAAATAAAAAAGAGGCTGACTCGAAAAGTAACTCCAAGGATGCCAAGGGTGAGAAAGTTCCTAAGCAGAAAGTAATTGCACGACTTCAGGAATGCG
GTCCTCGTTTCACAATGAAATTGATTAGTTTGCAGCATGGGACCTTCGATTCTAAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGACACAAGCCGCAGAAGA
TTTTTCTTG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGGAAAAAAAGAACAAGAGGGATATTATCCCATCAATGATAAAGAACAAGGAAAAGAGGAAAGAAGTGCACGACAACCTCAAGCAGCAGAAGAAGCTTGAGAA
ACGCAAGAGGGCCAAGGCTCGTGATGCTTCTGAAAAGCAAGCTCTTGAACTTGGAGAAGAACCTCCTCCCAGGATGATTCCTCGCACCATTGAGAACACCAGGGAGGTTG
ATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCAGGAAATGATGCCGATGAATTTAGTTCGATCATAAAGCGCCACACTTTGCCAAAAGTTCTGATAACTACT
TGTCGTTTTAACTCTACTATTGGACCTTCGTTTATATCAGAGTTGCTTTCAGTGATTCCAAATGCACATTACTACAAGAGGGGAACTAACGATTTGAAGAAGATTATAGA
ATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGGAAATTAGATGGCCTTCTAATTATTGGCTTGCCTGAGGGACCTACTGCCCATTTTA
AGATATCAAATGTTGTCTTACGAAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACTAACTTCACAACGCGCCTTGGTCTCCGTGTT
GGAAGGTTAATTCAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGGGTTGTAACTTTTCACAACCAACGGGACTTTATATTCTTCCGGCATCACCGTTACAT
TTTTGATAGCAAGGAAAATAAAAAAGAGGCTGACTCGAAAAGTAACTCCAAGGATGCCAAGGGTGAGAAAGTTCCTAAGCAGAAAGTAATTGCACGACTTCAGGAATGCG
GTCCTCGTTTCACAATGAAATTGATTAGTTTGCAGCATGGGACCTTCGATTCTAAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGACACAAGCCGCAGAAGA
TTTTTCTTG
Protein sequenceShow/hide protein sequence
MGEEKKNKRDIIPSMIKNKEKRKEVHDNLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITT
CRFNSTIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRV
GRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRR
FFL