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MS016958 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016958
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L29
Genome locationscaffold976:288630..288910
RNA-Seq ExpressionMS016958
SyntenyMS016958
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3024870.1 60S ribosomal L29-1, partial [Olea europaea subsp. europaea]1.4e-2090Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQSHKAHKNGIKKP+ HRHTSTKGMDPKFLRNQRYA+KHN KS DTA+EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

XP_022138412.1 60S ribosomal protein L29-1-like [Momordica charantia]4.9e-2193.33Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAH+NGIKKPR HRHTSTKGMDPKFLRNQRYAKKHNNKSA+TASEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

XP_022157681.1 60S ribosomal protein L29-1-like [Momordica charantia]1.8e-23100Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

XP_023000055.1 60S ribosomal protein L29-1 [Cucurbita maxima]1.4e-2091.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAH+NGIKKPR HRHTSTKGMDPKFLRNQRYAKKHNNKS +TASEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

XP_038875325.1 60S ribosomal protein L29-1-like [Benincasa hispida]6.5e-2193.33Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAHKNGIKKPR HRHTSTKGMDPKFLRNQRYAKKHNNKS +TASEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

TrEMBL top hitse value%identityAlignment
A0A6J1CB13 60S ribosomal protein L292.4e-2193.33Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAH+NGIKKPR HRHTSTKGMDPKFLRNQRYAKKHNNKSA+TASEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

A0A6J1DYX1 60S ribosomal protein L298.8e-24100Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

A0A6J1EUF7 60S ribosomal protein L297.0e-2191.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAH+NGIKKPR HRHTSTKGMDPKFLRNQRYAKKHNNKS +TASEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

A0A6J1KHA4 60S ribosomal protein L297.0e-2191.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAH+NGIKKPR HRHTSTKGMDPKFLRNQRYAKKHNNKS +TASEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

A0A6J1L4P4 60S ribosomal protein L292.0e-2090Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAH+NGIKKPR HRHTSTKGMDPKFLRNQRYAKKHNNKS +T SEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L296.1e-1475Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQS K H+NGIKKPR+ R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNK

Q58DW3 60S ribosomal protein L296.1e-1475Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQS K H+NGIKKPR+ R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNK

Q84WM0 60S ribosomal protein L29-22.2e-1981.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAHKNGIKKPR HRHT T+GMDPKFLRNQRYA+KHN KS + A  E
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

Q8HXB8 60S ribosomal protein L296.1e-1475Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQS K H+NGIKKPR+ R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNK

Q9M7X7 60S ribosomal protein L29-11.3e-1981.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAHKNGIKKPR HRHT T+GMDPKFLRNQRYA+KHN K+ + AS E
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family1.5e-2081.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAHKNGIKKPR HRHT T+GMDPKFLRNQRYA+KHN KS + A  E
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

AT3G06680.2 Ribosomal L29e protein family1.5e-2081.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAHKNGIKKPR HRHT T+GMDPKFLRNQRYA+KHN KS + A  E
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

AT3G06700.1 Ribosomal L29e protein family9.0e-2181.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAHKNGIKKPR HRHT T+GMDPKFLRNQRYA+KHN K+ + AS E
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

AT3G06700.2 Ribosomal L29e protein family9.0e-2181.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAHKNGIKKPR HRHT T+GMDPKFLRNQRYA+KHN K+ + AS E
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE

AT3G06700.3 Ribosomal L29e protein family9.0e-2181.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE
        MAKSKNHTAHNQS KAHKNGIKKPR HRHT T+GMDPKFLRNQRYA+KHN K+ + AS E
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGTCGAAGAATCACACGGCGCACAATCAGTCCCACAAAGCCCATAAGAATGGCATCAAGAAACCAAGGAACCATCGCCACACTTCCACCAAAGGGATGGATCC
GAAGTTCCTTAGGAATCAGAGGTACGCCAAGAAACACAACAACAAGAGTGCTGATACCGCTTCTGAGGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGTCGAAGAATCACACGGCGCACAATCAGTCCCACAAAGCCCATAAGAATGGCATCAAGAAACCAAGGAACCATCGCCACACTTCCACCAAAGGGATGGATCC
GAAGTTCCTTAGGAATCAGAGGTACGCCAAGAAACACAACAACAAGAGTGCTGATACCGCTTCTGAGGAA
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSHKAHKNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSADTASEE