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MS016974 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016974
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein TIC 214
Genome locationscaffold197:137059..137178
RNA-Seq ExpressionMS016974
SyntenyMS016974
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJD26342.1 Ycf1 [Trichosanthes kirilowii]9.6e-1397.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNISMFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
YP_009430686.1 photosystem I assembly protein Ycf1 [Gynostemma cardiospermum]9.6e-1397.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNISMFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
YP_009440204.1 hypothetical chloroplast RF19-like protein [Gynostemma longipes]9.6e-1397.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNISMFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
YP_009738261.1 Ycf1 [Siraitia siamensis]9.6e-1397.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNISMFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
YP_009753666.1 Ycf1 protein [Trichosanthes wallichiana]9.6e-1397.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNISMFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
TrEMBL top hitse value%identityAlignment
A0A1S4EU51 Protein TIC 2144.7e-1397.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNISMFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
A0A1S4EU70 Protein TIC 2144.7e-1397.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNISMFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
A0A249RZD8 Protein TIC 2144.7e-1397.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNISMFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
A0A6M3RWE9 Protein TIC 2144.7e-1397.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNISMFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
A0A6M3S424 Protein TIC 2144.7e-1397.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNISMFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
SwissProt top hitse value%identityAlignment
A4GYX4 Protein TIC 2146.3e-1595Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNI MFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
A4QJH4 Protein TIC 2141.8e-1492.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSML RLVNI MFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
A4QJQ8 Protein TIC 2141.8e-1492.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSML RLVNI MFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
Q09WW0 Protein TIC 2146.3e-1595Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNI MFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
Q14FA0 Protein TIC 2146.3e-1595Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSMLVRLVNI MFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
Arabidopsis top hitse value%identityAlignment
AT2G07739.1 Ycf1 protein2.9e-0789.29Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFV
        PSSML RLVNI MFRCN KMLFVTSSFV
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFV
ATCG01000.1 Ycf1 protein1.3e-1592.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSML RLVNI MFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
ATCG01130.1 Ycf1 protein1.3e-1592.5Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
        PSSML RLVNI MFRCN KMLFVTSSFVGWLIGHILFMKW
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW
ATMG00370.1 Ycf1 protein2.9e-0789.29Show/hide
Query:  PSSMLVRLVNISMFRCNKKMLFVTSSFV
        PSSML RLVNI MFRCN KMLFVTSSFV
Subjt:  PSSMLVRLVNISMFRCNKKMLFVTSSFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAAGTTCAATGTTAGTCAGATTAGTCAACATTTCTATGTTTCGATGCAACAAGAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATT
CATGAAATGG
mRNA sequenceShow/hide mRNA sequence
CCAAGTTCAATGTTAGTCAGATTAGTCAACATTTCTATGTTTCGATGCAACAAGAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATT
CATGAAATGG
Protein sequenceShow/hide protein sequence
PSSMLVRLVNISMFRCNKKMLFVTSSFVGWLIGHILFMKW