CuGenDBv2

Gene ID	MS016976
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit alpha, chloroplastic
Genome location	scaffold197:144870..145069
RNA-Seq Expression	MS016976
Synteny	MS016976
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

YP_009236266.1 ATP synthase CF1 alpha subunit [Gynostemma pentaphyllum]

2.5e-18

83.58

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQKTSSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

YP_009439876.1 ATP synthase CF1 alpha subunit [Gynostemma caulopterum]

2.5e-18

83.58

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQKTSSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

YP_009439963.1 ATP synthase CF1 alpha subunit [Gynostemma pentagynum]

2.5e-18

83.58

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQKTSSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

YP_009454432.1 ATP synthase CF1 alpha subunit [Daniellia pilosa]

3.3e-18

83.58

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQK SSV QVVTTLQE  AMEYTI+VAETADS AT+QYLTPY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

YP_010015124.1 ATP synthase CF1 alpha subunit [Gynostemma yixingense]

2.5e-18

83.58

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQKTSSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

TrEMBL top hits

e value

%identity

Alignment

A0A109WWJ5 ATP synthase subunit alpha, chloroplastic

1.2e-18

83.58

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQKTSSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

A0A291IAL8 ATP synthase subunit alpha, chloroplastic

1.2e-18

83.58

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQKTSSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

A0A291IAW7 ATP synthase subunit alpha, chloroplastic

1.2e-18

83.58

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQKTSSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

A0A291IB12 ATP synthase subunit alpha, chloroplastic

1.2e-18

83.58

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQKTSSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

A0A2L0WR06 ATP synthase subunit alpha, chloroplastic

1.2e-18

83.58

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQKTSSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

SwissProt top hits

e value

%identity

Alignment

B1NWD5 ATP synthase subunit alpha, chloroplastic

1.3e-20

82.09

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQK SSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

Q09X32 ATP synthase subunit alpha, chloroplastic

1.3e-20

82.09

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQK SSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

Q33C53 ATP synthase subunit alpha, chloroplastic

1.3e-20

82.09

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQK SSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

Q3C1H4 ATP synthase subunit alpha, chloroplastic

1.3e-20

82.09

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQK SSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

Q8S8Y3 ATP synthase subunit alpha, chloroplastic

1.3e-20

82.09

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQK SSV QVVTTLQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

1.2e-10

Show/hide

Query:  GKTTVATDTILNQ---------QGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKTT+A DTILNQ         + E + CV+V IGQK S+V Q++ TL+E  A+EY+I+VA TA   A +Q+L PY
Subjt:  GKTTVATDTILNQ---------QGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

ATCG00120.1 ATP synthase subunit alpha

2.6e-21

80.6

Show/hide

Query:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKT VATDTILNQQG+NVICV+V IGQK SSV QVVT+LQE  AMEYTI+VAETADS AT+QYL PY
Subjt:  GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

ATMG01190.1 ATP synthase subunit 1

1.2e-10

Show/hide

Query:  GKTTVATDTILNQ---------QGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY
        GKTT+A DTILNQ         + E + CV+V IGQK S+V Q++ TL+E  A+EY+I+VA TA   A +Q+L PY
Subjt:  GKTTVATDTILNQ---------QGENVICVHVVIGQKTSSVVQVVTTLQEM-AMEYTIIVAETADSLATVQYLTPY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

GGTAAAACTACAGTAGCCACAGATACGATTCTCAATCAACAAGGGGAAAATGTAATATGTGTTCATGTAGTTATTGGTCAAAAAACATCTTCTGTGGTTCAAGTAGTGAC
TACTTTACAGGAAATGGCAATGGAATACACTATTATAGTAGCTGAAACGGCGGATTCTCTGGCTACAGTACAATACCTTACTCCTTAT

mRNA sequence

Show/hide mRNA sequence

GGTAAAACTACAGTAGCCACAGATACGATTCTCAATCAACAAGGGGAAAATGTAATATGTGTTCATGTAGTTATTGGTCAAAAAACATCTTCTGTGGTTCAAGTAGTGAC
TACTTTACAGGAAATGGCAATGGAATACACTATTATAGTAGCTGAAACGGCGGATTCTCTGGCTACAGTACAATACCTTACTCCTTAT

Protein sequence

Show/hide protein sequence

GKTTVATDTILNQQGENVICVHVVIGQKTSSVVQVVTTLQEMAMEYTIIVAETADSLATVQYLTPY

MS016976 (gene) of Bitter gourd (TR) v1 genome