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MS016979 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016979
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-regulated gene involved in organ size
Genome locationscaffold197:210227..210451
RNA-Seq ExpressionMS016979
SyntenyMS016979
Gene Ontology termsGO:0009725 - response to hormone (biological process)
GO:0046622 - positive regulation of organ growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025988.1 hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa]1.4e-0984Show/hide
Query:  MLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAE
        MLI +AVSLLILP+VLPPLPPPP+LLLFVPVLIMSLL+FLA+SPS+ PAE
Subjt:  MLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAE

KAG2683596.1 hypothetical protein I3760_10G039000 [Carya illinoinensis]2.1e-0871.43Show/hide
Query:  FFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVP
        +FS RS V++I +AVSL+++P++LPPLPPPPLLLLFVPVLIMSLLV LA+S S VP
Subjt:  FFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVP

KAG2687345.1 hypothetical protein I3760_09G047200 [Carya illinoinensis]3.5e-0865Show/hide
Query:  MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVP
        M R + S  + V+++ + VSL++LP+V+PPLPPPPLLLLFVPVLIMSLLV LA+SPSQ P
Subjt:  MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVP

KAG6603314.1 hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1574.03Show/hide
Query:  MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAA--AHGHDSA
        MVRAFFS RS  MLI VA SLLILP+VLPPLPPPP+LLLFVPVLIM  L+FLA+SPS+VPAE+  V A    GHDSA
Subjt:  MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAA--AHGHDSA

TYK04223.1 hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa]1.4e-0984Show/hide
Query:  MLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAE
        MLI +AVSLLILP+VLPPLPPPP+LLLFVPVLIMSLL+FLA+SPS+ PAE
Subjt:  MLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAE

TrEMBL top hitse value%identityAlignment
A0A0A0L0Y7 Uncharacterized protein1.9e-1572Show/hide
Query:  MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAAAHGHDSA
        MVR FFS RS  MLI VAVSLLILP+VLPPLPPPP+LLLFVPVLIMSLL+FLA+SPS+VPAE+ H       D++
Subjt:  MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAAAHGHDSA

A0A2G9HLC2 Uncharacterized protein2.2e-0863.33Show/hide
Query:  MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVP
        M R FFS +S V +I + VSLL+LP+VLPPLPPPPL+LL VPV IM++L+FLA++P Q+P
Subjt:  MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVP

A0A5A7SII5 Uncharacterized protein6.9e-1084Show/hide
Query:  MLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAE
        MLI +AVSLLILP+VLPPLPPPP+LLLFVPVLIMSLL+FLA+SPS+ PAE
Subjt:  MLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAE

A0A5B7AL58 Uncharacterized protein (Fragment)1.2e-0963.33Show/hide
Query:  MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVP
        M+  FFS R+ V+++ + VSLL+LPVVLPPLPPPPL+LLF+P+LIM++L+ LA SPSQ+P
Subjt:  MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVP

A0A5D3BWW3 Uncharacterized protein6.9e-1084Show/hide
Query:  MLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAE
        MLI +AVSLLILP+VLPPLPPPP+LLLFVPVLIMSLL+FLA+SPS+ PAE
Subjt:  MLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAE

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE6.2e-0862.26Show/hide
Query:  FFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPS
        +FS  S V+L+G+  SLLILP+VLPPLPPPP +LL VP+ IM LL+ LA  PS
Subjt:  FFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPS

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.8e-0762.26Show/hide
Query:  FFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPS
        +FS  S  +L+G+  SLLILP+VLPPLPPPP +LL VP+ IM LLV LA  PS
Subjt:  FFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPS

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.2e-0548.33Show/hide
Query:  FFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDS
        +FS  S ++L+ V  SL+ILP+VLPPLPPPP +L+ VPV ++ LL+ LA  P+   +  S
Subjt:  FFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDS

Q8RWS1 Protein ORGAN SIZE RELATED 14.5e-0656.6Show/hide
Query:  RSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPA
        RS  +L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Subjt:  RSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPA

Q8RXL7 ARGOS-like protein1.8e-0750Show/hide
Query:  AFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAAA
        ++FS  S V+L+G+  SLLILP++LPPLPPPP +LL +P+ IM LL+ LA  PS   +   HV+++
Subjt:  AFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAAA

Arabidopsis top hitse value%identityAlignment
AT2G41225.1 unknown protein7.3e-0440.62Show/hide
Query:  VMLIGVAVSLL-ILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAAAHGHDS
        + +IGV + LL +LP VLPPLPPPP++L+ +PV++M +L++LA+     P   +H  ++   D+
Subjt:  VMLIGVAVSLL-ILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAAAHGHDS

AT2G41230.1 unknown protein3.2e-0756.6Show/hide
Query:  RSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPA
        RS  +L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Subjt:  RSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPA

AT2G44080.1 ARGOS-like1.3e-0850Show/hide
Query:  AFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAAA
        ++FS  S V+L+G+  SLLILP++LPPLPPPP +LL +P+ IM LL+ LA  PS   +   HV+++
Subjt:  AFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAAA

AT3G59900.1 auxin-regulated gene involved in organ size1.3e-0862.26Show/hide
Query:  FFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPS
        +FS  S  +L+G+  SLLILP+VLPPLPPPP +LL VP+ IM LLV LA  PS
Subjt:  FFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAGCATTCTTTAGCTGGAGATCGGCGGTAATGTTGATTGGTGTGGCGGTGTCGCTTCTGATATTGCCGGTGGTGCTGCCGCCGCTGCCGCCGCCGCCGCTTCT
GCTGCTGTTTGTTCCGGTGCTGATCATGTCGCTGCTCGTATTCTTGGCGATGTCGCCGTCGCAAGTGCCGGCGGAGGACAGCCATGTTGCCGCCGCCCACGGCCACGATT
CTGCT
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGAGCATTCTTTAGCTGGAGATCGGCGGTAATGTTGATTGGTGTGGCGGTGTCGCTTCTGATATTGCCGGTGGTGCTGCCGCCGCTGCCGCCGCCGCCGCTTCT
GCTGCTGTTTGTTCCGGTGCTGATCATGTCGCTGCTCGTATTCTTGGCGATGTCGCCGTCGCAAGTGCCGGCGGAGGACAGCCATGTTGCCGCCGCCCACGGCCACGATT
CTGCT
Protein sequenceShow/hide protein sequence
MVRAFFSWRSAVMLIGVAVSLLILPVVLPPLPPPPLLLLFVPVLIMSLLVFLAMSPSQVPAEDSHVAAAHGHDSA