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MS016982 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016982
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMitochondrial import inner membrane translocase subunit TIM22-4-like
Genome locationscaffold197:266373..266571
RNA-Seq ExpressionMS016982
SyntenyMS016982
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039024.1 uncharacterized protein E6C27_scaffold84G001110 [Cucumis melo var. makuwa]1.6e-0453.19Show/hide
Query:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE
        GRRD+R+  PNP EGFSC+S    +VN SL+   VFSL+W+VK+ ++
Subjt:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE

KAA0060009.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis melo var. makuwa]7.0e-0557.45Show/hide
Query:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE
        GRRD+R+  PNP EGFSC+S F  LVN S     VF +LW +KIPK+
Subjt:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE

TYJ97267.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis melo var. makuwa]7.0e-0557.45Show/hide
Query:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE
        GRRD+R+  PNP EGFSC+S F  LVN S     VF +LW +KIPK+
Subjt:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]3.4e-0745.31Show/hide
Query:  TDIVALLSLIGDFSIYSGRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE
        +++VAL+SL+   S   GRRD+ +  P P EGF C+S F CLVN + +S  V SL+W++K+P++
Subjt:  TDIVALLSLIGDFSIYSGRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]1.4e-0544.3Show/hide
Query:  DIVALLSLIGDFSIYSGRRDLRLG-PNPSEGFSCRSLFHCLVNQSLSS--------------NPVFSLLWKVKIPKEIK
        +I ALL L+   S  SGR D+R+  PNP  GFSC S F  L++ S SS               P F+ LWK+KIPK+IK
Subjt:  DIVALLSLIGDFSIYSGRRDLRLG-PNPSEGFSCRSLFHCLVNQSLSS--------------NPVFSLLWKVKIPKEIK

TrEMBL top hitse value%identityAlignment
A0A5A7T6A8 Uncharacterized protein7.6e-0553.19Show/hide
Query:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE
        GRRD+R+  PNP EGFSC+S    +VN SL+   VFSL+W+VK+ ++
Subjt:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE

A0A5A7V2G8 Mitochondrial import inner membrane translocase subunit TIM22-4-like3.4e-0557.45Show/hide
Query:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE
        GRRD+R+  PNP EGFSC+S F  LVN S     VF +LW +KIPK+
Subjt:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE

A0A5D3BDR8 Mitochondrial import inner membrane translocase subunit TIM22-4-like3.4e-0557.45Show/hide
Query:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE
        GRRD+R+  PNP EGFSC+S F  LVN S     VF +LW +KIPK+
Subjt:  GRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE

A0A5D3CI74 Calpain-type cysteine protease DEK11.6e-0745.31Show/hide
Query:  TDIVALLSLIGDFSIYSGRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE
        +++VAL+SL+   S   GRRD+ +  P P EGF C+S F CLVN + +S  V SL+W++K+P++
Subjt:  TDIVALLSLIGDFSIYSGRRDLRL-GPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKE

A0A6J1DFI2 uncharacterized protein LOC1110196246.9e-0644.3Show/hide
Query:  DIVALLSLIGDFSIYSGRRDLRLG-PNPSEGFSCRSLFHCLVNQSLSS--------------NPVFSLLWKVKIPKEIK
        +I ALL L+   S  SGR D+R+  PNP  GFSC S F  L++ S SS               P F+ LWK+KIPK+IK
Subjt:  DIVALLSLIGDFSIYSGRRDLRLG-PNPSEGFSCRSLFHCLVNQSLSS--------------NPVFSLLWKVKIPKEIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAGATATTGTGGCCCTCCTTTCTTTGATTGGGGACTTTTCTATTTACTCAGGGAGAAGGGATTTACGCCTCGGCCCTAATCCTTCTGAAGGGTTCTCTTGTAGATCTCT
CTTCCATTGCTTGGTGAATCAATCTCTCTCCAGTAACCCTGTCTTCTCCTTGTTGTGGAAGGTCAAAATCCCCAAGGAGATTAAA
mRNA sequenceShow/hide mRNA sequence
ACAGATATTGTGGCCCTCCTTTCTTTGATTGGGGACTTTTCTATTTACTCAGGGAGAAGGGATTTACGCCTCGGCCCTAATCCTTCTGAAGGGTTCTCTTGTAGATCTCT
CTTCCATTGCTTGGTGAATCAATCTCTCTCCAGTAACCCTGTCTTCTCCTTGTTGTGGAAGGTCAAAATCCCCAAGGAGATTAAA
Protein sequenceShow/hide protein sequence
TDIVALLSLIGDFSIYSGRRDLRLGPNPSEGFSCRSLFHCLVNQSLSSNPVFSLLWKVKIPKEIK