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MS016983 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016983
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSIL1
Genome locationscaffold197:266792..266966
RNA-Seq ExpressionMS016983
SyntenyMS016983
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19563.1 uncharacterized protein E5676_scaffold416G00660 [Cucumis melo var. makuwa]6.0e-0857.41Show/hide
Query:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL
        +LH PF ++G FLWLA  CA +W    ERN+R+FRG +R L ++ SLVRFHVSL
Subjt:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL

TYK23653.1 SIL1 [Cucumis melo var. makuwa]3.3e-0655.1Show/hide
Query:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVR
        LL +P  ++GCFLW    CA +W    ERNNR+FRG+ER   +VWSLVR
Subjt:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVR

TYK30974.1 hypothetical protein E5676_scaffold455G002010 [Cucumis melo var. makuwa]1.1e-0450.91Show/hide
Query:  FLDEGCFLWLACF------CASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL
        F ++GCFL L CF      C+ +W    E+NNR+FRG E    +VWSLV FHVSL
Subjt:  FLDEGCFLWLACF------CASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]9.5e-0648.15Show/hide
Query:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL
        LL++P  + G FLW AC CA LW    E N R+F G+ER   ++W ++R+HVSL
Subjt:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]2.8e-0565.79Show/hide
Query:  PFLDEGCFLWLACFCASLWGT-LERNNRIFRGIERSLE
        PF + G FLW ACF ASLWG  LERNNR+FRG+E+S++
Subjt:  PFLDEGCFLWLACFCASLWGT-LERNNRIFRGIERSLE

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909764.6e-0648.15Show/hide
Query:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL
        LL++P  + G FLW AC CA LW    E N R+F G+ER   ++W ++R+HVSL
Subjt:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL

A0A5D3D7T2 Uncharacterized protein2.9e-0857.41Show/hide
Query:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL
        +LH PF ++G FLWLA  CA +W    ERN+R+FRG +R L ++ SLVRFHVSL
Subjt:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL

A0A5D3DJ76 SIL11.6e-0655.1Show/hide
Query:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVR
        LL +P  ++GCFLW    CA +W    ERNNR+FRG+ER   +VWSLVR
Subjt:  LLHVPFLDEGCFLWLACFCASLWGTL-ERNNRIFRGIERSLEKVWSLVR

A0A5D3E4W8 Uncharacterized protein5.1e-0550.91Show/hide
Query:  FLDEGCFLWLACF------CASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL
        F ++GCFL L CF      C+ +W    E+NNR+FRG E    +VWSLV FHVSL
Subjt:  FLDEGCFLWLACF------CASLWGTL-ERNNRIFRGIERSLEKVWSLVRFHVSL

A0A6J1DFI2 uncharacterized protein LOC1110196241.3e-0565.79Show/hide
Query:  PFLDEGCFLWLACFCASLWGT-LERNNRIFRGIERSLE
        PF + G FLW ACF ASLWG  LERNNR+FRG+E+S++
Subjt:  PFLDEGCFLWLACFCASLWGT-LERNNRIFRGIERSLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCTTCATGTGCCCTTTCTTGACGAGGGTTGTTTCTTGTGGTTGGCCTGTTTTTGTGCTTCTCTTTGGGGTACATTAGAGAGAAATAATAGAATCTTTAGAGGGATTGA
GAGATCTTTGGAGAAGGTTTGGTCCCTCGTTAGATTCCATGTCTCTTTGGGCCCGGGTGCT
mRNA sequenceShow/hide mRNA sequence
CTTCTTCATGTGCCCTTTCTTGACGAGGGTTGTTTCTTGTGGTTGGCCTGTTTTTGTGCTTCTCTTTGGGGTACATTAGAGAGAAATAATAGAATCTTTAGAGGGATTGA
GAGATCTTTGGAGAAGGTTTGGTCCCTCGTTAGATTCCATGTCTCTTTGGGCCCGGGTGCT
Protein sequenceShow/hide protein sequence
LLHVPFLDEGCFLWLACFCASLWGTLERNNRIFRGIERSLEKVWSLVRFHVSLGPGA