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MS016993 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016993
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationscaffold197:411926..412021
RNA-Seq ExpressionMS016993
SyntenyMS016993
Gene Ontology termsGO:0000287 - magnesium ion binding (molecular function)
InterPro domainsIPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAA67188.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Crepidomanes minutum]1.6e-0571.88Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAPCA   + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
AAA84329.2 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Illicium parviflorum]5.9e-0571.88Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A   +E++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
AAW23013.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Trilophozia quinquedentata]7.7e-0568.75Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A+  + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
RYR38853.1 hypothetical protein Ahy_A09g044116 [Arachis hypogaea]3.5e-0568.75Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAPC+   + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
YP_009772868.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Avicennia marina]7.7e-0571.88Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A+  + S+E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
TrEMBL top hitse value%identityAlignment
A0A445BJK2 Uncharacterized protein1.7e-0568.75Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAPC+   + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
A0A6B9DD99 Ribulose bisphosphate carboxylase large chain3.7e-0571.88Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A+  + S+E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
Q32468 Ribulose bisphosphate carboxylase large chain (Fragment)2.9e-0571.88Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A   +E++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
Q37331 Ribulose bisphosphate carboxylase large chain (Fragment)7.5e-0671.88Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAPCA   + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
Q49M32 Ribulose bisphosphate carboxylase large chain (Fragment)3.7e-0568.75Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A+  + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
SwissProt top hitse value%identityAlignment
A1EA16 Ribulose bisphosphate carboxylase large chain2.3e-0768.75Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A+  + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
P24671 Ribulose bisphosphate carboxylase large chain2.3e-0768.75Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A+  + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
P25413 Ribulose bisphosphate carboxylase large chain (Fragment)2.3e-0768.75Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A+  + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
P31183 Ribulose bisphosphate carboxylase large chain (Fragment)1.7e-0768.75Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGT+GHPWGNAP A  G+ ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
P48684 Ribulose bisphosphate carboxylase large chain2.3e-0768.75Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A+  + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
Arabidopsis top hitse value%identityAlignment
ATCG00490.1 ribulose-bisphosphate carboxylases3.6e-0868.75Show/hide
Query:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE
        F DDSVLQF GGTLGHPWGNAP A   + ++E
Subjt:  FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTCGGATGATTCTGTACTACAATTCAGCGGAGGAACTTTAGGGCACCCTTGGGGTAATGCACCTTGTGCCTCGATCGGAAAAGAATCAATAGAA
mRNA sequenceShow/hide mRNA sequence
TTTTCGGATGATTCTGTACTACAATTCAGCGGAGGAACTTTAGGGCACCCTTGGGGTAATGCACCTTGTGCCTCGATCGGAAAAGAATCAATAGAA
Protein sequenceShow/hide protein sequence
FSDDSVLQFSGGTLGHPWGNAPCASIGKESIE