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MS016994 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016994
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPolynucleotidyl transferase, ribonuclease H-like superfamily protein
Genome locationscaffold197:418490..418666
RNA-Seq ExpressionMS016994
SyntenyMS016994
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.0e-0544.07Show/hide
Query:  VEDCQKLAKNFANIQFVFVRRSSNKVAHEAASFAFNSVSSMWFS-NFPIWLSEAGSEEF
        ++D +  AK F+N+QF FVRR  NKVAHE A    NS      S   PIWL +    +F
Subjt:  VEDCQKLAKNFANIQFVFVRRSSNKVAHEAASFAFNSVSSMWFS-NFPIWLSEAGSEEF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGAGGATTGCCAAAAATTGGCAAAGAATTTTGCCAACATTCAGTTCGTCTTCGTGCGCCGGTCTTCAAACAAAGTCGCTCACGAAGCGGCTTCTTTTGCTTTCAACTC
AGTTTCTTCCATGTGGTTTTCCAACTTCCCGATTTGGCTCTCTGAAGCTGGTTCGGAGGAGTTCACG
mRNA sequenceShow/hide mRNA sequence
GTGGAGGATTGCCAAAAATTGGCAAAGAATTTTGCCAACATTCAGTTCGTCTTCGTGCGCCGGTCTTCAAACAAAGTCGCTCACGAAGCGGCTTCTTTTGCTTTCAACTC
AGTTTCTTCCATGTGGTTTTCCAACTTCCCGATTTGGCTCTCTGAAGCTGGTTCGGAGGAGTTCACG
Protein sequenceShow/hide protein sequence
VEDCQKLAKNFANIQFVFVRRSSNKVAHEAASFAFNSVSSMWFSNFPIWLSEAGSEEFT