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MS016998 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016998
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold197:520926..521066
RNA-Seq ExpressionMS016998
SyntenyMS016998
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2636102.1 hypothetical protein D8674_026636 [Pyrus ussuriensis x Pyrus communis]1.5e-0452.17Show/hide
Query:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE
        W  NV  K+KI  WK   DIIPTK NL KK  +++L C+FC   EE
Subjt:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE

KGN63144.1 hypothetical protein Csa_022313 [Cucumis sativus]4.3e-0443.48Show/hide
Query:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE
        W+  V PK+K++ WK   + +PT +N+ K+G+ TN  C+FCRK  E
Subjt:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE

RXH82922.1 hypothetical protein DVH24_003420 [Malus domestica]3.3e-0447.83Show/hide
Query:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE
        WKAN+ PK+K   W   +DI+PTK NL KKG+   + C  C+ +EE
Subjt:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE

XP_021838610.1 ABC transporter G family member 39-like [Spinacia oleracea]5.6e-0451.22Show/hide
Query:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFC
        WK N+ PK K  CWK ++ I+PTK NL K+G++T+  C FC
Subjt:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFC

XP_021849886.1 uncharacterized protein LOC110789515 [Spinacia oleracea]1.1e-0451.11Show/hide
Query:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDE
        WKAN+ PK KI  WK +N+ IPTK NL ++ +  +  CVFC K+E
Subjt:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDE

TrEMBL top hitse value%identityAlignment
A0A0A0LQ43 zf-RVT domain-containing protein2.1e-0443.48Show/hide
Query:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE
        W+  V PK+K++ WK   + +PT +N+ K+G+ TN  C+FCRK  E
Subjt:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE

A0A498ILS0 Uncharacterized protein1.6e-0447.83Show/hide
Query:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE
        WKAN+ PK+K   W   +DI+PTK NL KKG+   + C  C+ +EE
Subjt:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE

A0A540NSN9 zf-RVT domain-containing protein3.6e-0447.83Show/hide
Query:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE
        WKA V PK+K+  WK    I+PTK NL KKG+S  + C  C +  E
Subjt:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE

A0A5E4GGB8 PREDICTED: reverse mRNAase (Fragment)7.9e-0451.22Show/hide
Query:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFC
        W ANV  K+KI  W+  +DI+PTK NL KKG+     C+FC
Subjt:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFC

A0A5N5IC60 Uncharacterized protein7.2e-0552.17Show/hide
Query:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE
        W  NV  K+KI  WK   DIIPTK NL KK  +++L C+FC   EE
Subjt:  WKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGTGGAAAGCAAATGTAGTGCCGAAAATAAAGATTGCATGCTGGAAGTTTGTGAACGATATTATTCCTACAAAAACTAATCTTTGCAAGAAAGGACTTTCTACTAACTT
GTGTTGTGTTTTTTGTAGGAAGGATGAAGAA
mRNA sequenceShow/hide mRNA sequence
TCGTGGAAAGCAAATGTAGTGCCGAAAATAAAGATTGCATGCTGGAAGTTTGTGAACGATATTATTCCTACAAAAACTAATCTTTGCAAGAAAGGACTTTCTACTAACTT
GTGTTGTGTTTTTTGTAGGAAGGATGAAGAA
Protein sequenceShow/hide protein sequence
SWKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE