; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017003 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017003
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionR3H domain-containing protein 1-like isoform X1
Genome locationscaffold197:570505..571545
RNA-Seq ExpressionMS017003
SyntenyMS017003
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001374 - R3H domain
IPR024771 - SUZ domain
IPR036867 - R3H domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011653850.1 uncharacterized protein LOC101216736 [Cucumis sativus]1.0e-12479.93Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS
        +LRMELDIQ FLQNQ+QQLFEFQHF TSYLRLAAHRVAQHYGLQTMVQDN IDGQGRILV+KTVEA+FP ICLSQIPAKQ ADD  G VKIA+RPRPNK 
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS

Query:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD
        SD+   CMAKQ   RTVEQRKEEYDKARARIFSSQGS G V+V  H   EGL I  NRDR E CRVNDV+KY+S+ DAG+G +SRVAILRDREKDLSDPD
Subjt:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD

Query:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
        YDRSY+RYVK+LPIN TPS+NFAPFT+QNI PSF GYHVPRN+V L YVSPSPIKTVGLN +SR + NVPWPCAGMPY HTAFQ
Subjt:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ

XP_022154556.1 R3H domain-containing protein 1-like isoform X1 [Momordica charantia]8.3e-15999.65Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS
        +LRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS

Query:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD
        SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD
Subjt:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD

Query:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
        YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
Subjt:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ

XP_022154558.1 uncharacterized protein LOC111021798 isoform X2 [Momordica charantia]1.6e-14199.21Show/hide
Query:  RLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDDGMGCMAKQGLGRTVEQRKEEYDKARAR
        RL  HRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDDGMGCMAKQGLGRTVEQRKEEYDKARAR
Subjt:  RLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDDGMGCMAKQGLGRTVEQRKEEYDKARAR

Query:  IFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNI
        IFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNI
Subjt:  IFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNI

Query:  QPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
        QPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
Subjt:  QPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ

XP_022154559.1 cAMP-regulated phosphoprotein 21-like isoform X3 [Momordica charantia]1.6e-157100Show/hide
Query:  MELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDD
        MELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDD
Subjt:  MELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDD

Query:  GMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDR
        GMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDR
Subjt:  GMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDR

Query:  SYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
        SYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
Subjt:  SYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ

XP_038883354.1 R3H domain-containing protein 1-like [Benincasa hispida]2.4e-12682.04Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS
        +LRMELDIQ FLQNQEQQ+FEFQHF TSYLRLAAHRVAQHYGLQT VQDN IDGQGRILVRKTVEA+FP +CLSQIPAKQSADD  GRVKIA+RPRPNKS
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS

Query:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD
        SDD   CMAKQ LGR+VEQRKEEYDKARARIFSSQGSTGSVDV S    E LDIS NRDR E CRVN+V+K +S+KD G+G +SRVAILRDREKDLSDPD
Subjt:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD

Query:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
        YDRSY+RYVK+LPIN TPSMNFAPFTMQN+ PSF GYHVPRN+  LSYVSPS IKTVGLN +SR + N PWPCAGMPYTHTAFQ
Subjt:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ

TrEMBL top hitse value%identityAlignment
A0A0A0L247 Uncharacterized protein4.9e-12579.93Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS
        +LRMELDIQ FLQNQ+QQLFEFQHF TSYLRLAAHRVAQHYGLQTMVQDN IDGQGRILV+KTVEA+FP ICLSQIPAKQ ADD  G VKIA+RPRPNK 
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS

Query:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD
        SD+   CMAKQ   RTVEQRKEEYDKARARIFSSQGS G V+V  H   EGL I  NRDR E CRVNDV+KY+S+ DAG+G +SRVAILRDREKDLSDPD
Subjt:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD

Query:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
        YDRSY+RYVK+LPIN TPS+NFAPFT+QNI PSF GYHVPRN+V L YVSPSPIKTVGLN +SR + NVPWPCAGMPY HTAFQ
Subjt:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ

A0A5A7SJ76 R3H domain-containing protein 1-like isoform X16.5e-12581.34Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS
        +LRMELDIQ FLQNQEQQ+FEFQHF TSYLRLAAHRVAQHYGLQTMVQDN IDGQGRILV+KTVEA+FP ICLSQIPAKQ ADD  G VKIAVRP+PNK 
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS

Query:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD
        SDD   CMAKQ  GRTVEQRKEEYDKARARIFSSQ S+GSVDV SH  TEGL I  NRDRAE CRVNDV+KY S  DAG+G +SRVAILRDREKDLSDPD
Subjt:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD

Query:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
        YDRSY+RYVK+LPIN TPS+NF PFT QNI PSF GYHVPRN+VPL YVSPS IKTVGLN +SR++ NVPWPCAGMPY H+AFQ
Subjt:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ

A0A6J1DKM4 uncharacterized protein LOC111021798 isoform X27.6e-14299.21Show/hide
Query:  RLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDDGMGCMAKQGLGRTVEQRKEEYDKARAR
        RL  HRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDDGMGCMAKQGLGRTVEQRKEEYDKARAR
Subjt:  RLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDDGMGCMAKQGLGRTVEQRKEEYDKARAR

Query:  IFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNI
        IFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNI
Subjt:  IFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNI

Query:  QPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
        QPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
Subjt:  QPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ

A0A6J1DMG7 cAMP-regulated phosphoprotein 21-like isoform X37.6e-158100Show/hide
Query:  MELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDD
        MELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDD
Subjt:  MELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDD

Query:  GMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDR
        GMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDR
Subjt:  GMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDR

Query:  SYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
        SYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
Subjt:  SYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ

A0A6J1DP27 R3H domain-containing protein 1-like isoform X14.0e-15999.65Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS
        +LRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKS

Query:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD
        SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD
Subjt:  SDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPD

Query:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
        YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ
Subjt:  YDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ

SwissProt top hitse value%identityAlignment
Q15032 R3H domain-containing protein 11.7e-0527.45Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGR-ILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNK
        +L++E +I  F+ N E    +F    TSY R+  HRVA ++GL     D+ +D  G+ ++V KT   + P    ++       +D   R    +  R N 
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGR-ILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNK

Query:  S---SDDGMGCMAKQG-LGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKD
        S    D+ M    K     +++E+R+EEY +AR RIFS        +       +  D S+ + R +  RVN        KDA    T+      + E  
Subjt:  S---SDDGMGCMAKQG-LGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKD

Query:  LSDP
         S+P
Subjt:  LSDP

Arabidopsis top hitse value%identityAlignment
AT2G40960.1 Single-stranded nucleic acid binding R3H protein1.4e-5043.84Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDG-QGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNK
        +LRMELD+Q FLQ+ +QQ FEFQHF TSYLR AAHRVA HYGL T V+D   DG + RI+V K+ +++FP   LS+IP KQS       +K+ ++PRP K
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDG-QGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNK

Query:  SSDDGM-GCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSD
         S  GM G   K GL ++VE+RKE+YD+ARARIF+   +    D SS      ++ S++RD  +  +  +++   +     S P SR+AILRDREKD  D
Subjt:  SSDDGM-GCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSD

Query:  PDYDRSYDRYVKNLPINPTPSMNFAPFTMQNI-----QPSFPGYH--VPRNDVPLSYVSPSPIKTVGLNPISR-TTVNVPWP-CAGMPYTHT
        PDYDRS  RY+ NLP++   ++  A F +Q +        F GY    P +     +   SP  T GLN  SR   + + WP  A + YTH+
Subjt:  PDYDRSYDRYVKNLPINPTPSMNFAPFTMQNI-----QPSFPGYH--VPRNDVPLSYVSPSPIKTVGLNPISR-TTVNVPWP-CAGMPYTHT

AT3G10770.1 Single-stranded nucleic acid binding R3H protein2.3e-5049.32Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDN---AIDG-QGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPR
        +LRMELDIQ F QN EQ  FEF  F TSYLRLAAHRVAQHYGL TM  DN   A DG   RILV KT E++FP +CLS+IP KQ  +      KIA++PR
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDN---AIDG-QGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPR

Query:  PNKSSD-DGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHN--FTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDRE
        P + S   G G   +Q L R+VE+RKEEYDKARARIF+S  S+ S D SS      E  +   NR+  E   VN+    +  +D  SG TSRVAI+RDRE
Subjt:  PNKSSD-DGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHN--FTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDRE

Query:  KDLSDPDYDRSYDRYV-----KNLPINPTPSMNFAPFTMQNIQPSFPGY--HVPR-NDVPLSYVSPSPIKTVGLNP-ISRTTVNV----PWP
        KD  DPDYDRSYDRYV     + + + P+   +F+P  +    P   G+  H+PR +   L+Y  P       LNP +S  T NV    PWP
Subjt:  KDLSDPDYDRSYDRYV-----KNLPINPTPSMNFAPFTMQNIQPSFPGY--HVPR-NDVPLSYVSPSPIKTVGLNP-ISRTTVNV----PWP

AT3G10770.2 Single-stranded nucleic acid binding R3H protein9.4e-5250.17Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDN---AIDG-QGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPR
        +LRMELDIQ F QN EQ  FEF  F TSYLRLAAHRVAQHYGL TM  DN   A DG   RILV KT E++FP +CLS+IP KQ  +      KIA++PR
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDN---AIDG-QGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPR

Query:  PNKSSD-DGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHN--FTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDRE
        P + S   G G   +Q L R+VE+RKEEYDKARARIF+S  S+ S D SS      E  +   NR+  E   VN+    +  +D  SG TSRVAI+RDRE
Subjt:  PNKSSD-DGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHN--FTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDRE

Query:  KDLSDPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGY--HVPR-NDVPLSYVSPSPIKTVGLNP-ISRTTVNV----PWP
        KD  DPDYDRSYDRYV+ +P       +F+P  +    P   G+  H+PR +   L+Y  P       LNP +S  T NV    PWP
Subjt:  KDLSDPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGY--HVPR-NDVPLSYVSPSPIKTVGLNP-ISRTTVNV----PWP

AT3G56680.1 Single-stranded nucleic acid binding R3H protein4.4e-5746.71Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDG-QGRILVRKTVEAKFPPICLSQIP-AKQSADDTIGRVKIAVRPRPN
        +LRMELD+Q  LQN EQQ FEFQHF TSYLRLAAHRVA HYGL T VQ++  DG + RILV KT E+KFP + LS+IP AKQS +      K++++ RP+
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDG-QGRILVRKTVEAKFPPICLSQIP-AKQSADDTIGRVKIAVRPRPN

Query:  KSSDDGMGCMAK-QGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLS
        K S  G G + K +G  R+VE+RKEEYDKAR RIFS        D SS       + S +RD  +  +   V+   ++    SGPTSRVAI RDREKD  
Subjt:  KSSDDGMGCMAK-QGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLS

Query:  DPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNI-----QPSFPGYH-VPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTH
        DPDYDR + RY+++LP+N   + N  PF +Q I     +  F GY+ +P    PL +  P P   +     +   + + WP A M Y H
Subjt:  DPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNI-----QPSFPGYH-VPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTH

AT5G05100.1 Single-stranded nucleic acid binding R3H protein1.1e-4744.67Show/hide
Query:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGL-QTMVQDNAIDGQG-RILVRKTVEAKFPPICLSQIPAKQSADDTIGR---VKIAVRP
        +LRMELDIQ F Q+ EQQ +EFQ   TSYLRL AHRVAQHYGL  T ++   +DG G RIL  KTVE+++P +CLS+IP KQ   +  GR    KIA++P
Subjt:  VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGL-QTMVQDNAIDGQG-RILVRKTVEAKFPPICLSQIPAKQSADDTIGR---VKIAVRP

Query:  RPNK-SSDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSS-------------HNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSG
        RPN+ +   G G   ++ L R+VE+RKEEYDKARARIF+S  S+ S D S+             HN        T           DV++   I+D  SG
Subjt:  RPNK-SSDDGMGCMAKQGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSS-------------HNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSG

Query:  PTSRVAILRDREKDLSDPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHT
         TSRVAI+RDREKD  DPDYDR  +RYV+  P  P  + N  P  +      FP   +PR    L+Y  P       LNP         WP A M Y  T
Subjt:  PTSRVAILRDREKDLSDPDYDRSYDRYVKNLPINPTPSMNFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCTGCGGATGGAACTCGACATCCAAATGTTTTTGCAAAACCAAGAGCAGCAGCTGTTCGAGTTTCAACACTTTTCTACTTCGTACCTTCGACTTGCAGCTCATCGTGT
TGCTCAACACTATGGCCTGCAAACTATGGTTCAGGACAATGCCATAGATGGTCAAGGAAGGATTTTGGTGAGGAAAACTGTTGAAGCTAAATTCCCGCCCATTTGCTTAT
CTCAAATACCTGCGAAACAGTCGGCTGATGATACAATTGGGCGAGTTAAAATTGCTGTTAGGCCTAGGCCTAATAAATCATCTGATGATGGAATGGGTTGTATGGCCAAA
CAAGGTCTTGGTCGGACTGTGGAGCAGAGGAAGGAAGAGTATGATAAGGCACGTGCTCGAATATTCAGCAGCCAAGGTAGTACTGGTTCGGTGGATGTATCGTCCCATAA
TTTCACCGAGGGGCTAGATATATCAACAAATAGAGACAGGGCTGAAGGGTGTAGAGTGAATGATGTAGACAAATATTCAAGTATCAAAGACGCTGGGAGTGGGCCTACTT
CTCGGGTTGCCATTTTAAGAGATAGGGAAAAGGATCTTAGCGACCCGGATTATGATCGGAGTTATGATAGGTATGTTAAGAATCTTCCGATTAATCCGACTCCGAGCATG
AATTTCGCACCTTTCACCATGCAAAACATCCAGCCTTCATTTCCTGGTTACCATGTACCGAGGAACGATGTCCCGTTGAGCTATGTTTCTCCTTCACCTATCAAGACTGT
AGGATTGAATCCGATATCTAGAACTACAGTCAATGTGCCATGGCCGTGTGCAGGGATGCCGTACACTCATACTGCTTTCCAG
mRNA sequenceShow/hide mRNA sequence
GTTCTGCGGATGGAACTCGACATCCAAATGTTTTTGCAAAACCAAGAGCAGCAGCTGTTCGAGTTTCAACACTTTTCTACTTCGTACCTTCGACTTGCAGCTCATCGTGT
TGCTCAACACTATGGCCTGCAAACTATGGTTCAGGACAATGCCATAGATGGTCAAGGAAGGATTTTGGTGAGGAAAACTGTTGAAGCTAAATTCCCGCCCATTTGCTTAT
CTCAAATACCTGCGAAACAGTCGGCTGATGATACAATTGGGCGAGTTAAAATTGCTGTTAGGCCTAGGCCTAATAAATCATCTGATGATGGAATGGGTTGTATGGCCAAA
CAAGGTCTTGGTCGGACTGTGGAGCAGAGGAAGGAAGAGTATGATAAGGCACGTGCTCGAATATTCAGCAGCCAAGGTAGTACTGGTTCGGTGGATGTATCGTCCCATAA
TTTCACCGAGGGGCTAGATATATCAACAAATAGAGACAGGGCTGAAGGGTGTAGAGTGAATGATGTAGACAAATATTCAAGTATCAAAGACGCTGGGAGTGGGCCTACTT
CTCGGGTTGCCATTTTAAGAGATAGGGAAAAGGATCTTAGCGACCCGGATTATGATCGGAGTTATGATAGGTATGTTAAGAATCTTCCGATTAATCCGACTCCGAGCATG
AATTTCGCACCTTTCACCATGCAAAACATCCAGCCTTCATTTCCTGGTTACCATGTACCGAGGAACGATGTCCCGTTGAGCTATGTTTCTCCTTCACCTATCAAGACTGT
AGGATTGAATCCGATATCTAGAACTACAGTCAATGTGCCATGGCCGTGTGCAGGGATGCCGTACACTCATACTGCTTTCCAG
Protein sequenceShow/hide protein sequence
VLRMELDIQMFLQNQEQQLFEFQHFSTSYLRLAAHRVAQHYGLQTMVQDNAIDGQGRILVRKTVEAKFPPICLSQIPAKQSADDTIGRVKIAVRPRPNKSSDDGMGCMAK
QGLGRTVEQRKEEYDKARARIFSSQGSTGSVDVSSHNFTEGLDISTNRDRAEGCRVNDVDKYSSIKDAGSGPTSRVAILRDREKDLSDPDYDRSYDRYVKNLPINPTPSM
NFAPFTMQNIQPSFPGYHVPRNDVPLSYVSPSPIKTVGLNPISRTTVNVPWPCAGMPYTHTAFQ