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MS017008 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017008
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold197:603197..603748
RNA-Seq ExpressionMS017008
SyntenyMS017008
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54678.1 hypothetical protein Csa_012366 [Cucumis sativus]1.2e-0643.3Show/hide
Query:  MKLKFLFFLLVAILSTLLLSRDVDGRKSLLQIEDRED-SKLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLED-PGDEEGESSK-DEGESEDEGVPGND
        ++L  LFF +  +   LL+S++VDGRKSLLQ E R+D +KLVKQS  LDA  HGEMV         K P DLED P D++GE+S+ DE  SE+E VPG +
Subjt:  MKLKFLFFLLVAILSTLLLSRDVDGRKSLLQIEDRED-SKLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLED-PGDEEGESSK-DEGESEDEGVPGND

Query:  EGESGDDEGESGDEGVPGDDE--GESGDQGVPEGDEGEGDSEDEG--EGDSGDGVPVNDNGKL----GGGDGHEDAVVNQEDDFRGVETYNNDN
        EGE G D G+ GD G  G DE  G  GD   P    GE   +D G  EGD G+G    ++G+      GG+  E+   ++  +    E    DN
Subjt:  EGESGDDEGESGDEGVPGDDE--GESGDQGVPEGDEGEGDSEDEG--EGDSGDGVPVNDNGKL----GGGDGHEDAVVNQEDDFRGVETYNNDN

TYK09628.1 hypothetical protein E5676_scaffold447G00230 [Cucumis melo var. makuwa]3.5e-0948.09Show/hide
Query:  KLKFLFFLLVAI-LSTLLLSRDVDGRKSLLQIEDREDS-KLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLED-PGDEEGESSKDEGESEDEGVPGNDE
        KL+ L F  V+I +S LL+S  VDGRKSLLQ E R+DS KLV+QS  LDA  HGEMV         K P DLED P D++GE+S+DE  SE E VPG++E
Subjt:  KLKFLFFLLVAI-LSTLLLSRDVDGRKSLLQIEDREDS-KLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLED-PGDEEGESSKDEGESEDEGVPGNDE

Query:  GES---GDDEGESG--------------DEGVPGDDEGESGDQ--GVPEGDEGEGDSEDEGE-------GDSGDGVPVNDNGK
        GES   GDD GESG              + G P D   E GD   G  EGDEGE   E+ GE       G SG+ V  ++NG+
Subjt:  GES---GDDEGESG--------------DEGVPGDDEGESGDQ--GVPEGDEGEGDSEDEGE-------GDSGDGVPVNDNGK

XP_038882385.1 spore wall protein 2-like [Benincasa hispida]4.4e-1246.35Show/hide
Query:  LVAILSTLLLSRDVDGRKSLLQIEDR-EDSKLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLEDPGDEEGESSKDEGESEDEGVPGNDEGE--SGDDEG
        ++AILS  LLS +VDGRKSLLQ EDR ED+KL KQS +LDA  HG+MV   + +   K P DLED G++E ESS+ + E  +EG+P  DEGE   G  EG
Subjt:  LVAILSTLLLSRDVDGRKSLLQIEDR-EDSKLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLEDPGDEEGESSKDEGESEDEGVPGNDEGE--SGDDEG

Query:  ESG-------------DEGVPGDDEGES-GDQGVPEGDEGEGDSEDEG---EGDSGD------GVPVNDNGKLGGGDGHEDAVVNQEDDFRG
        ESG             +E  PGDD+GES GD G     +G+GD +DEG   EGD GD      G+   DN +   GD  +  +V  + D RG
Subjt:  ESG-------------DEGVPGDDEGES-GDQGVPEGDEGEGDSEDEG---EGDSGD------GVPVNDNGKLGGGDGHEDAVVNQEDDFRG

TrEMBL top hitse value%identityAlignment
A0A0A0KYS7 Uncharacterized protein6.0e-0743.3Show/hide
Query:  MKLKFLFFLLVAILSTLLLSRDVDGRKSLLQIEDRED-SKLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLED-PGDEEGESSK-DEGESEDEGVPGND
        ++L  LFF +  +   LL+S++VDGRKSLLQ E R+D +KLVKQS  LDA  HGEMV         K P DLED P D++GE+S+ DE  SE+E VPG +
Subjt:  MKLKFLFFLLVAILSTLLLSRDVDGRKSLLQIEDRED-SKLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLED-PGDEEGESSK-DEGESEDEGVPGND

Query:  EGESGDDEGESGDEGVPGDDE--GESGDQGVPEGDEGEGDSEDEG--EGDSGDGVPVNDNGKL----GGGDGHEDAVVNQEDDFRGVETYNNDN
        EGE G D G+ GD G  G DE  G  GD   P    GE   +D G  EGD G+G    ++G+      GG+  E+   ++  +    E    DN
Subjt:  EGESGDDEGESGDEGVPGDDE--GESGDQGVPEGDEGEGDSEDEG--EGDSGDGVPVNDNGKL----GGGDGHEDAVVNQEDDFRGVETYNNDN

A0A5D3CEH4 Uncharacterized protein1.7e-0948.09Show/hide
Query:  KLKFLFFLLVAI-LSTLLLSRDVDGRKSLLQIEDREDS-KLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLED-PGDEEGESSKDEGESEDEGVPGNDE
        KL+ L F  V+I +S LL+S  VDGRKSLLQ E R+DS KLV+QS  LDA  HGEMV         K P DLED P D++GE+S+DE  SE E VPG++E
Subjt:  KLKFLFFLLVAI-LSTLLLSRDVDGRKSLLQIEDREDS-KLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLED-PGDEEGESSKDEGESEDEGVPGNDE

Query:  GES---GDDEGESG--------------DEGVPGDDEGESGDQ--GVPEGDEGEGDSEDEGE-------GDSGDGVPVNDNGK
        GES   GDD GESG              + G P D   E GD   G  EGDEGE   E+ GE       G SG+ V  ++NG+
Subjt:  GES---GDDEGESG--------------DEGVPGDDEGESGDQ--GVPEGDEGEGDSEDEGE-------GDSGDGVPVNDNGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCATGAAGTTGAAATTTCTCTTCTTCCTTTTAGTTGCTATTCTCTCTACCCTTCTACTTTCTCGAGATGTCGATGGTAGAAAATCTTTACTCCAAATAGAGGATAGAGA
AGACTCTAAGCTCGTCAAACAAAGTATTGTTTTAGATGCAGGTTCTCATGGTGAAATGGTAGATGCAATTACGACCTATCATCATAATAAGAAACCAGCTGATTTAGAAG
ATCCTGGTGACGAAGAAGGTGAAAGTTCCAAAGATGAAGGAGAATCTGAGGATGAGGGAGTTCCTGGAAACGACGAAGGAGAATCTGGAGATGACGAAGGAGAATCTGGA
GATGAGGGAGTTCCTGGAGACGACGAAGGAGAATCTGGAGATCAGGGAGTTCCCGAAGGAGATGAAGGAGAAGGAGATTCTGAAGATGAAGGAGAAGGAGATTCTGGAGA
TGGCGTTCCTGTCAACGACAATGGAAAACTTGGAGGTGGTGATGGACACGAAGATGCTGTAGTCAATCAAGAAGATGACTTTAGAGGTGTTGAAACTTACAATAATGATA
AC
mRNA sequenceShow/hide mRNA sequence
ATCATGAAGTTGAAATTTCTCTTCTTCCTTTTAGTTGCTATTCTCTCTACCCTTCTACTTTCTCGAGATGTCGATGGTAGAAAATCTTTACTCCAAATAGAGGATAGAGA
AGACTCTAAGCTCGTCAAACAAAGTATTGTTTTAGATGCAGGTTCTCATGGTGAAATGGTAGATGCAATTACGACCTATCATCATAATAAGAAACCAGCTGATTTAGAAG
ATCCTGGTGACGAAGAAGGTGAAAGTTCCAAAGATGAAGGAGAATCTGAGGATGAGGGAGTTCCTGGAAACGACGAAGGAGAATCTGGAGATGACGAAGGAGAATCTGGA
GATGAGGGAGTTCCTGGAGACGACGAAGGAGAATCTGGAGATCAGGGAGTTCCCGAAGGAGATGAAGGAGAAGGAGATTCTGAAGATGAAGGAGAAGGAGATTCTGGAGA
TGGCGTTCCTGTCAACGACAATGGAAAACTTGGAGGTGGTGATGGACACGAAGATGCTGTAGTCAATCAAGAAGATGACTTTAGAGGTGTTGAAACTTACAATAATGATA
AC
Protein sequenceShow/hide protein sequence
IMKLKFLFFLLVAILSTLLLSRDVDGRKSLLQIEDREDSKLVKQSIVLDAGSHGEMVDAITTYHHNKKPADLEDPGDEEGESSKDEGESEDEGVPGNDEGESGDDEGESG
DEGVPGDDEGESGDQGVPEGDEGEGDSEDEGEGDSGDGVPVNDNGKLGGGDGHEDAVVNQEDDFRGVETYNNDN