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MS017030 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017030
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVARLMGL domain-containing protein
Genome locationscaffold197:742972..743340
RNA-Seq ExpressionMS017030
SyntenyMS017030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043629.1 uncharacterized protein E6C27_scaffold320G00740 [Cucumis melo var. makuwa]5.0e-2870.71Show/hide
Query:  MEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTD-MPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF
        M+KKKK  E D+D PLTWRSKAMGES++EIS EISWGLK EM KIGMALQHHIY DLIDEMLTD + FSS +SS       +++S IPPFEACRRRL F
Subjt:  MEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTD-MPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF

KAG6595453.1 hypothetical protein SDJN03_12006, partial [Cucurbita argyrosperma subsp. sororia]9.5e-2752.74Show/hide
Query:  QQQPKIKKPTVEEKDDSFFKAS-----------------------TLLMEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHH
        QQQPK K P   E +D+   +S                       T + ++KK+ ++  +DP LTWRSKAM ESLDEISN+ISWG K EMAKIGMALQHH
Subjt:  QQQPKIKKPTVEEKDDSFFKAS-----------------------TLLMEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHH

Query:  IYRDLIDEMLTDMPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF
        IYR+LIDEMLTDM      SS  FLP  +++S +PPFEACRRRL F
Subjt:  IYRDLIDEMLTDMPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF

XP_011653835.1 uncharacterized protein LOC101223146 [Cucumis sativus]3.5e-2973.74Show/hide
Query:  MEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTD-MPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF
        M+KKKK  E D+D PLTWRSKAMGESL+EIS EISWGLK EMAKIGMALQHHIY DLIDEMLTD M FSS +SS       +++S IPPFEACRRRL F
Subjt:  MEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTD-MPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF

XP_022154518.1 uncharacterized protein LOC111021776 [Momordica charantia]3.2e-5998.37Show/hide
Query:  QQQPKIKKPTVEEKDDSFFKASTLLMEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNF
        QQQPKIKKPTVEEKDDS FKASTLLM KKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNF
Subjt:  QQQPKIKKPTVEEKDDSFFKASTLLMEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNF

Query:  FLPIDYYNSMIPPFEACRRRLPF
        FLPIDYYNSMIPPFEACRRRLPF
Subjt:  FLPIDYYNSMIPPFEACRRRLPF

XP_038881423.1 uncharacterized protein LOC120072954 isoform X1 [Benincasa hispida]3.5e-2970.91Show/hide
Query:  KASTLLME-----KKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTD-MPFSSPYSSNFFLPIDYYNSMIPP
        KAS+ +ME     K KK  E DD  PLTWRSK MGESL+EIS EISWGLK EM KIGMALQ+HIY+DLIDEMLTD MPFSS YSS F +P D   S IPP
Subjt:  KASTLLME-----KKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTD-MPFSSPYSSNFFLPIDYYNSMIPP

Query:  FEACRRRLPF
        FEACRRRL F
Subjt:  FEACRRRLPF

TrEMBL top hitse value%identityAlignment
A0A0A0L3D7 VARLMGL domain-containing protein1.7e-2973.74Show/hide
Query:  MEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTD-MPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF
        M+KKKK  E D+D PLTWRSKAMGESL+EIS EISWGLK EMAKIGMALQHHIY DLIDEMLTD M FSS +SS       +++S IPPFEACRRRL F
Subjt:  MEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTD-MPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF

A0A4Y1RRP4 Uncharacterized protein7.6e-1440.65Show/hide
Query:  QQQPKIKKPTVEEKDDSFFKASTLLMEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNF
        Q Q + KKP  E+    F   +  ++EK   +       PL W S AM ES++E+  +I+WG +RE+ +IG+ALQ HIY+DLI EM+T+M +S  YS   
Subjt:  QQQPKIKKPTVEEKDDSFFKASTLLMEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNF

Query:  FLPIDYYNSMIPPFEACRRRLPF
                    PFEAC+RRL F
Subjt:  FLPIDYYNSMIPPFEACRRRLPF

A0A5A7TR24 Uncharacterized protein2.4e-2870.71Show/hide
Query:  MEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTD-MPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF
        M+KKKK  E D+D PLTWRSKAMGES++EIS EISWGLK EM KIGMALQHHIY DLIDEMLTD + FSS +SS       +++S IPPFEACRRRL F
Subjt:  MEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTD-MPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF

A0A6J1DKI5 uncharacterized protein LOC1110217761.6e-5998.37Show/hide
Query:  QQQPKIKKPTVEEKDDSFFKASTLLMEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNF
        QQQPKIKKPTVEEKDDS FKASTLLM KKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNF
Subjt:  QQQPKIKKPTVEEKDDSFFKASTLLMEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNF

Query:  FLPIDYYNSMIPPFEACRRRLPF
        FLPIDYYNSMIPPFEACRRRLPF
Subjt:  FLPIDYYNSMIPPFEACRRRLPF

A0A6J1HMZ3 uncharacterized protein LOC1114660892.5e-2553.52Show/hide
Query:  QQQPKIKKPTVEEKDDSFFKAS----TLLMEK---------------KKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRD
        QQQ K K P   E +D+   +S    + L E+                KK+ +  +DP LTWRSKAM ESLDEISN+ISWG K EMAKIGM LQHHIYR+
Subjt:  QQQPKIKKPTVEEKDDSFFKAS----TLLMEK---------------KKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRD

Query:  LIDEMLTDMPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF
        LIDEMLTDM      SS  FLP  +++S +PPFEACRRRL F
Subjt:  LIDEMLTDMPFSSPYSSNFFLPIDYYNSMIPPFEACRRRLPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56810.1 unknown protein2.1e-0835.11Show/hide
Query:  KAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNFF-LPIDYY---------------NSMIPPFEACRRRLPF
        +++ ES++++ ++++ G +RE+AKIG+AL  HI RDLI E + ++ FS      F+  P+D                 +S   PF+ACRRRL F
Subjt:  KAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNFF-LPIDYY---------------NSMIPPFEACRRRLPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGCAGCAGCCGAAGATCAAGAAGCCAACAGTTGAGGAAAAAGACGACTCCTTCTTCAAGGCATCGACATTATTAATGGAGAAGAAGAAGAAGGATGATGAGGTAGATGA
TGATCCGCCATTAACGTGGAGAAGCAAGGCCATGGGCGAGAGCTTGGATGAAATCTCCAACGAAATCTCATGGGGCCTCAAACGCGAGATGGCGAAAATAGGTATGGCTT
TACAACATCACATTTACAGAGACTTGATTGATGAGATGCTCACTGATATGCCTTTTTCTTCTCCTTATTCTTCTAATTTCTTCCTCCCCATTGATTATTATAATTCCATG
ATTCCCCCCTTTGAAGCATGTAGGAGAAGACTGCCTTTC
mRNA sequenceShow/hide mRNA sequence
CAGCAGCAGCCGAAGATCAAGAAGCCAACAGTTGAGGAAAAAGACGACTCCTTCTTCAAGGCATCGACATTATTAATGGAGAAGAAGAAGAAGGATGATGAGGTAGATGA
TGATCCGCCATTAACGTGGAGAAGCAAGGCCATGGGCGAGAGCTTGGATGAAATCTCCAACGAAATCTCATGGGGCCTCAAACGCGAGATGGCGAAAATAGGTATGGCTT
TACAACATCACATTTACAGAGACTTGATTGATGAGATGCTCACTGATATGCCTTTTTCTTCTCCTTATTCTTCTAATTTCTTCCTCCCCATTGATTATTATAATTCCATG
ATTCCCCCCTTTGAAGCATGTAGGAGAAGACTGCCTTTC
Protein sequenceShow/hide protein sequence
QQQPKIKKPTVEEKDDSFFKASTLLMEKKKKDDEVDDDPPLTWRSKAMGESLDEISNEISWGLKREMAKIGMALQHHIYRDLIDEMLTDMPFSSPYSSNFFLPIDYYNSM
IPPFEACRRRLPF