; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017065 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017065
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionbinding partner of ACD11 1
Genome locationscaffold197:1097777..1100755
RNA-Seq ExpressionMS017065
SyntenyMS017065
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 - Vip1-like, RNA recognition motif, plant
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]4.8e-12492.05Show/hide
Query:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-
        QSQTRTVQV HVSDLATEREIHEFFSFSGEIEHIEIQCE G+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVP+RE+QEVRV DNAACLT 
Subjt:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-

Query:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK
        TENN PS EDSASQPS G+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASAS KVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ+LHVSDK
Subjt:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        TMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAG+KTREKFHLAMSNL SK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]4.8e-12492.05Show/hide
Query:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-
        QSQTRTVQV HVSDLATEREIHEFFSFSGEIEHIEIQCE G+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVP+RE+QEVRV DNAACLT 
Subjt:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-

Query:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK
        TENN PS EDSASQPS G+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASAS KVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ+LHVSDK
Subjt:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        TMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAG+KTREKFHLAMSNL SK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

XP_008462804.1 PREDICTED: binding partner of ACD11 1-like [Cucumis melo]9.6e-12592.42Show/hide
Query:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-
        QSQTRTVQV HVSDLATEREIHEFFSFSGEIEHIEIQCE G+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVP+REIQEVRV DNAACLT 
Subjt:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-

Query:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK
        TENN PS EDSASQPS G+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASAS KVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ+LHVSDK
Subjt:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        TMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAG+KTREKFHLAMSNL SK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

XP_022154555.1 binding partner of ACD11 1 [Momordica charantia]5.4e-13699.62Show/hide
Query:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTT
        QS+TRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTT
Subjt:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTT

Query:  ENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKT
        ENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKT
Subjt:  ENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKT

Query:  MAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        MAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
Subjt:  MAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]3.9e-12693.94Show/hide
Query:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-
        QSQTRTVQV HVSDLATEREIHEFFSFSGEIEHIEIQCE GQSKTAFVTFRDPKALEIALLLSGATIVDQIVSIS AENHVP+RE+QEVRVVDNAACLT 
Subjt:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-

Query:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK
        TENN PS EDSASQPS G+MYVNRAQ VVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASAS KVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ LHVSDK
Subjt:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAG+KTREKFHLAMSNLTSK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein2.3e-12492.05Show/hide
Query:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-
        QSQTRTVQV HVSDLATEREIHEFFSFSGEIEHIEIQCE G+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVP+RE+QEVRV DNAACLT 
Subjt:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-

Query:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK
        TENN PS EDSASQPS G+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASAS KVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ+LHVSDK
Subjt:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        TMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAG+KTREKFHLAMSNL SK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

A0A1S3CIA3 binding partner of ACD11 1-like4.6e-12592.42Show/hide
Query:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-
        QSQTRTVQV HVSDLATEREIHEFFSFSGEIEHIEIQCE G+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVP+REIQEVRV DNAACLT 
Subjt:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-

Query:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK
        TENN PS EDSASQPS G+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASAS KVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ+LHVSDK
Subjt:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        TMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAG+KTREKFHLAMSNL SK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

A0A5D3BPG7 Binding partner of ACD11 1-like4.6e-12592.42Show/hide
Query:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-
        QSQTRTVQV HVSDLATEREIHEFFSFSGEIEHIEIQCE G+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVP+REIQEVRV DNAACLT 
Subjt:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-

Query:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK
        TENN PS EDSASQPS G+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASAS KVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ+LHVSDK
Subjt:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        TMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAG+KTREKFHLAMSNL SK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

A0A6J1DJX5 binding partner of ACD11 12.6e-13699.62Show/hide
Query:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTT
        QS+TRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTT
Subjt:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTT

Query:  ENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKT
        ENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKT
Subjt:  ENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKT

Query:  MAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        MAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
Subjt:  MAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

A0A6J1IKN1 binding partner of ACD11 13.9e-12492.05Show/hide
Query:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-
        QSQTRTVQ  +VSDLATEREIHEFFSFSGEIEH+EIQCE GQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAEN+VP+RE+QEVR VDNAA LT 
Subjt:  QSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-

Query:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK
        TENN PS EDSASQPS GRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKH+LTASAS KVLSFDR+VGLTEKLTVGISVVNEKVKSVDQ+LHVSDK
Subjt:  TENNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        TMAAIFAAERK+NDTGSAVKTSKYVT+GAAWLNGAFGKVAKAGQAAG+KTREKFHLAMSNLTSK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

SwissProt top hitse value%identityAlignment
P87216 Protein vip13.8e-0724.5Show/hide
Query:  VQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTENNLPS
        V V ++S   TE++I +FFSF G++ +I  + + G+++TA + F  P A + ALLL  A +    + I+                 D  A  TT+     
Subjt:  VQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTENNLPS

Query:  NEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKT--MAAI
         + +A Q    R        +++ +L++G                 + L+    EK +  D+  G++ K    +      V+SV++R HV++K   +   
Subjt:  NEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKT--MAAI

Query:  FAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKF
        FA   KLN T S V T  +     A           AG +AG K +  +
Subjt:  FAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKF

Q9LFD5 Binding partner of ACD11 15.8e-4843.82Show/hide
Query:  SQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTE
        SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ       +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                   
Subjt:  SQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTE

Query:  NNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTM
           P+   + +Q SG    V +A++VV+S+LAKG  +G+DA+ KAKAFDEKH  T++A+  V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T 
Subjt:  NNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREK
        +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  AAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.8e-5245.17Show/hide
Query:  TVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTENNLP
        TV+V++VS  AT+R++ EFFSFSG+I ++E Q E  ++K A+VTF+D +  E A+LLSGATIVD  V +S A ++    E          A  + E    
Subjt:  TVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTENNLP

Query:  SNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAIF
          +DS   P  G   + +A++VV+S+LAKG  +G+DA+ KAK+ DEKH+LT++AS KV SFD+++G T+K+  G  VV EKV+ VDQ+  VS+KT +AI 
Subjt:  SNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAIF

Query:  AAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSKV
        AAE+ +++ GSA+  ++YV  GA W+ GAF KVAKA +  G K +EK  +A      KV
Subjt:  AAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSKV

AT5G16840.1 binding partner of acd11 14.1e-4943.82Show/hide
Query:  SQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTE
        SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ       +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                   
Subjt:  SQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTE

Query:  NNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTM
           P+   + +Q SG    V +A++VV+S+LAKG  +G+DA+ KAKAFDEKH  T++A+  V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T 
Subjt:  NNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREK
        +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  AAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREK

AT5G16840.2 binding partner of acd11 12.4e-4944.22Show/hide
Query:  SQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTE
        SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +  S  A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                   
Subjt:  SQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTE

Query:  NNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTM
           P+   + +Q SG    V +A++VV+S+LAKG  +G+DA+ KAKAFDEKH  T++A+  V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T 
Subjt:  NNLPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREK
        +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  AAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein7.4e-9973.85Show/hide
Query:  TRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTENN
        TR+VQVN+VSDLATEREIHEFFSFSG+IEHIEIQ E GQS+ AFVTF DPKALEIALLLSGATIVDQIV+I+ AEN+V +RE QEVR++DNA  L  + +
Subjt:  TRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTENN

Query:  LPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAA
          + +   +     R YV++AQ+VVA+VLAKGSA+GQDA+NKAKAFDEKH+L A+AS KV SFD+RVGLTEKL+VGIS VNEKVKSVDQ+L VSDKTMAA
Subjt:  LPSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAA

Query:  IFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK
        IFAAERKLNDTGSAVK+S+YVTAGAAW +GAF KVA+ GQ AGSKT+EKF+LA+SN++SK
Subjt:  IFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-5042.46Show/hide
Query:  TVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPKREIQEVRVVDNAACLTTENNL
        TV+V++VS  ATER++ EFFSFSG+I ++E Q E+  SK A+VTF+D +  E A+LL+G+TIVD  V+++ + ++ +P   +  +  +      + +++ 
Subjt:  TVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPKREIQEVRVVDNAACLTTENNL

Query:  PSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAI
        P+ ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++AS +V SFD+R+G TEK+  G +VV+EKVK VDQ+  V++KT +AI
Subjt:  PSNEDSASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAI

Query:  FAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLA
         AAE+ +++ GSA+  ++YV  GA W+ GAF +V+KA +  G K +EK  LA
Subjt:  FAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTCAGTCTCAGACGCGGACGGTTCAAGTAAACCATGTTTCGGATCTAGCTACTGAGAGAGAGATTCACGAGTTCTTCTCCTTCTCTGGCGAAATTGAGCACATAGAGAT
CCAGTGTGAACATGGGCAATCAAAGACTGCGTTCGTGACATTTAGAGATCCAAAAGCTCTTGAAATCGCCTTATTGTTATCGGGAGCTACAATTGTAGACCAGATTGTGA
GCATATCTCCTGCTGAAAACCATGTACCAAAACGAGAAATTCAGGAAGTACGGGTTGTGGACAATGCTGCCTGCCTTACTACAGAAAATAATTTGCCCAGTAATGAGGAT
TCTGCGAGCCAGCCTAGCGGTGGAAGAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAGTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGC
GAAAGCATTTGACGAAAAACATCGGTTAACAGCTAGTGCATCTGAGAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATTTCAGTGG
TTAACGAGAAAGTCAAGTCTGTAGATCAAAGGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCGGTCAAA
ACAAGCAAGTATGTGACTGCGGGTGCTGCTTGGCTAAATGGTGCTTTCGGAAAGGTTGCAAAAGCGGGGCAGGCTGCAGGTTCTAAAACCAGAGAGAAATTCCATTTGGC
TATGTCAAACTTAACTTCAAAGGTGCGTTTA
mRNA sequenceShow/hide mRNA sequence
GCTCAGTCTCAGACGCGGACGGTTCAAGTAAACCATGTTTCGGATCTAGCTACTGAGAGAGAGATTCACGAGTTCTTCTCCTTCTCTGGCGAAATTGAGCACATAGAGAT
CCAGTGTGAACATGGGCAATCAAAGACTGCGTTCGTGACATTTAGAGATCCAAAAGCTCTTGAAATCGCCTTATTGTTATCGGGAGCTACAATTGTAGACCAGATTGTGA
GCATATCTCCTGCTGAAAACCATGTACCAAAACGAGAAATTCAGGAAGTACGGGTTGTGGACAATGCTGCCTGCCTTACTACAGAAAATAATTTGCCCAGTAATGAGGAT
TCTGCGAGCCAGCCTAGCGGTGGAAGAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAGTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGC
GAAAGCATTTGACGAAAAACATCGGTTAACAGCTAGTGCATCTGAGAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATTTCAGTGG
TTAACGAGAAAGTCAAGTCTGTAGATCAAAGGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCGGTCAAA
ACAAGCAAGTATGTGACTGCGGGTGCTGCTTGGCTAAATGGTGCTTTCGGAAAGGTTGCAAAAGCGGGGCAGGCTGCAGGTTCTAAAACCAGAGAGAAATTCCATTTGGC
TATGTCAAACTTAACTTCAAAGGTGCGTTTA
Protein sequenceShow/hide protein sequence
AQSQTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLTTENNLPSNED
SASQPSGGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVK
TSKYVTAGAAWLNGAFGKVAKAGQAAGSKTREKFHLAMSNLTSKVRL