; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017155 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017155
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionmRNA cap-binding protein
Genome locationscaffold33:108103..108432
RNA-Seq ExpressionMS017155
SyntenyMS017155
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEK98516.1 eukaryotic translation initiation factor 4E [Citrullus mucosospermus]3.7e-0638.74Show/hide
Query:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG
        VY NIHHP+KL  R DL C    I+      +    G      SRGKSD+G LYTL   I                             +  DCGD+ICG
Subjt:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG

Query:  AVVNVRPRQDK
        AVVNVR  QDK
Subjt:  AVVNVRPRQDK

XP_004147397.1 eukaryotic translation initiation factor 4E-1 [Cucumis sativus]1.7e-0638.74Show/hide
Query:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG
        VY NIHHP+KL  R DL C    I+      +  + G      SRGKSD+G LYTL   I                             +  DCGD+ICG
Subjt:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG

Query:  AVVNVRPRQDK
        AVVNVR  QDK
Subjt:  AVVNVRPRQDK

XP_022139998.1 eukaryotic translation initiation factor 4E-1 [Momordica charantia]2.8e-0638.74Show/hide
Query:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG
        VY NIHHP+KL  R DL C    I+      +    G      SRGKSD+G LYTL   I                             +  DCGD+ICG
Subjt:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG

Query:  AVVNVRPRQDK
        AVVNVR  QDK
Subjt:  AVVNVRPRQDK

XP_022954765.1 eukaryotic translation initiation factor 4E-1-like [Cucurbita moschata]2.8e-0638.74Show/hide
Query:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG
        VY NIHHP+KL  R DL C   +I+      +    G      SRGKSD+G LYTL   I                             +  DCGD+ICG
Subjt:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG

Query:  AVVNVRPRQDK
        AVVNVR  QDK
Subjt:  AVVNVRPRQDK

XP_022994876.1 eukaryotic translation initiation factor 4E-1-like [Cucurbita maxima]2.8e-0638.74Show/hide
Query:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG
        VY NIHHP+KL  R DL C   +I+      +    G      SRGKSD+G LYTL   I                             +  DCGD+ICG
Subjt:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG

Query:  AVVNVRPRQDK
        AVVNVR  QDK
Subjt:  AVVNVRPRQDK

TrEMBL top hitse value%identityAlignment
A0A6J1CH05 mRNA cap-binding protein1.4e-0638.74Show/hide
Query:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG
        VY NIHHP+KL  R DL C    I+      +    G      SRGKSD+G LYTL   I                             +  DCGD+ICG
Subjt:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG

Query:  AVVNVRPRQDK
        AVVNVR  QDK
Subjt:  AVVNVRPRQDK

A0A6J1GTC0 mRNA cap-binding protein1.4e-0638.74Show/hide
Query:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG
        VY NIHHP+KL  R DL C   +I+      +    G      SRGKSD+G LYTL   I                             +  DCGD+ICG
Subjt:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG

Query:  AVVNVRPRQDK
        AVVNVR  QDK
Subjt:  AVVNVRPRQDK

A0A6J1K0I1 mRNA cap-binding protein1.4e-0638.74Show/hide
Query:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG
        VY NIHHP+KL  R DL C   +I+      +    G      SRGKSD+G LYTL   I                             +  DCGD+ICG
Subjt:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG

Query:  AVVNVRPRQDK
        AVVNVR  QDK
Subjt:  AVVNVRPRQDK

B0F6T5 mRNA cap-binding protein8.0e-0738.74Show/hide
Query:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG
        VY NIHHP+KL  R DL C    I+      +  + G      SRGKSD+G LYTL   I                             +  DCGD+ICG
Subjt:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG

Query:  AVVNVRPRQDK
        AVVNVR  QDK
Subjt:  AVVNVRPRQDK

C7SG34 mRNA cap-binding protein1.8e-0638.74Show/hide
Query:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG
        VY NIHHP+KL  R DL C    I+      +    G      SRGKSD+G LYTL   I                             +  DCGD+ICG
Subjt:  VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARG-MDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICG

Query:  AVVNVRPRQDK
        AVVNVR  QDK
Subjt:  AVVNVRPRQDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTATACTACAATATCCATCATCCAACCAAGTTGACATCCAGGGTAGATTTGATTTGTGCTGTTTTAAACATAAAACTGAGCATTAATTGTAGGATCCTGTTTGCGAGGGG
AATGGACTGTAAACTTTCAAGGGGCAAATCTGACCATGGCTTGCTGTACACGCTACCACTCAAAATTGCGTGCTTAAGTTTACTGACACTAGTTATTTATTGTTTTTATA
ATAGTCAATCACTTTTCACAGCTGCTTGCTATCATTGGAGAACACAGATCAGTGATTGTGGTGATGACATTTGTGGAGCAGTTGTTAATGTTAGACCTCGGCAGGATAAA
mRNA sequenceShow/hide mRNA sequence
GTATACTACAATATCCATCATCCAACCAAGTTGACATCCAGGGTAGATTTGATTTGTGCTGTTTTAAACATAAAACTGAGCATTAATTGTAGGATCCTGTTTGCGAGGGG
AATGGACTGTAAACTTTCAAGGGGCAAATCTGACCATGGCTTGCTGTACACGCTACCACTCAAAATTGCGTGCTTAAGTTTACTGACACTAGTTATTTATTGTTTTTATA
ATAGTCAATCACTTTTCACAGCTGCTTGCTATCATTGGAGAACACAGATCAGTGATTGTGGTGATGACATTTGTGGAGCAGTTGTTAATGTTAGACCTCGGCAGGATAAA
Protein sequenceShow/hide protein sequence
VYYNIHHPTKLTSRVDLICAVLNIKLSINCRILFARGMDCKLSRGKSDHGLLYTLPLKIACLSLLTLVIYCFYNSQSLFTAACYHWRTQISDCGDDICGAVVNVRPRQDK