; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017163 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017163
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionsister chromatid cohesion 1 protein 1-like
Genome locationscaffold33:190353..193881
RNA-Seq ExpressionMS017163
SyntenyMS017163
Gene Ontology termsGO:0007062 - sister chromatid cohesion (biological process)
GO:0008278 - cohesin complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR006910 - Rad21/Rec8-like protein, N-terminal
IPR039781 - Rad21/Rec8-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146768.1 LOW QUALITY PROTEIN: sister chromatid cohesion 1 protein 1-like [Momordica charantia]8.8e-10660.73Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRL GILMGGVVIVYERKVKILY +   LLVELNEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  --FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH-----------------------
          FDIEEDEETHLNFAF EQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH                       
Subjt:  --FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH-----------------------

Query:  --------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
                                  RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
Subjt:  --------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG

XP_022146858.1 sister chromatid cohesion 1 protein 1-like [Momordica charantia]1.4e-10660.99Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRL GILMGGVVIVYERKVKILY +   LLVELNEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  --FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH-----------------------
          FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH                       
Subjt:  --FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH-----------------------

Query:  --------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
                                  RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
Subjt:  --------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG

XP_022985848.1 sister chromatid cohesion 1 protein 1-like isoform X1 [Cucurbita maxima]3.3e-7650Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LLVE+NEAWKVKAAPE TVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKS+AK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  -FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH------------------------
         FDIE+DE+T  NFA  +QT+IPDT  PS PPQD ++EG P+AE+QD          QHLER+VIQQ YESKELR                         
Subjt:  -FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH------------------------

Query:  -------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS
                                 RT AMSS+KI+ LMDLPPVVLSG LFTDG REVYYPAPLL+LWMKSIR+P DS S
Subjt:  -------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS

XP_023552287.1 sister chromatid cohesion 1 protein 1-like [Cucurbita pepo subsp. pepo]7.0e-7951.05Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LLVE+NEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKS+AK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  -FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH------------------------
         FDIE+DE+T  NFA  +QT+IPDT  PS PPQD H+EGPPDAE+QD          QHLER+VIQQ YESKELR                         
Subjt:  -FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH------------------------

Query:  -------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS
                                 RT AMSS+KI+ LMDLPPVVLSG LFTDG REVYYPAPLL+LWMKSIR P DS S
Subjt:  -------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS

XP_038891624.1 sister chromatid cohesion 1 protein 1 [Benincasa hispida]2.1e-7549.34Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LLVE+NEAWK+K APEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELR--------------------------
        FDIEEDE+T  NFA  +QTQIPDT RPS PPQ+ + EGPPDAE+QD          QHLERNVIQ  +ESKE R                          
Subjt:  FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELR--------------------------

Query:  -----------------------HRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS
                                RT AM ++KI+ LMDLPPVVLS  LFTDG REVYYPAPLL+LWM+SIR P  S S
Subjt:  -----------------------HRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS

TrEMBL top hitse value%identityAlignment
A0A0A0KM61 Rad21_Rec8_N domain-containing protein3.4e-8774.17Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSH LLARKAPLGQIWMAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LL+E+NEAWKVKAAPEPT +
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAKFDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELR-HRTSAMSSIKISVLMDL
        PKGKSLAKFDIEED +T  +FA  +QTQIP T RP PPP D + EGPPDAE+QD          QHLE  V Q   ESKELR  RT  M + KI+ LMDL
Subjt:  PKGKSLAKFDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELR-HRTSAMSSIKISVLMDL

Query:  PPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
        PPVVLS  LFT+G RE YYPAPLL+LWM+SIR P DS SG
Subjt:  PPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG

A0A6J1CZF6 LOW QUALITY PROTEIN: sister chromatid cohesion 1 protein 1-like4.3e-10660.73Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRL GILMGGVVIVYERKVKILY +   LLVELNEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  --FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH-----------------------
          FDIEEDEETHLNFAF EQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH                       
Subjt:  --FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH-----------------------

Query:  --------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
                                  RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
Subjt:  --------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG

A0A6J1CZP0 sister chromatid cohesion 1 protein 1-like6.6e-10760.99Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRL GILMGGVVIVYERKVKILY +   LLVELNEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  --FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH-----------------------
          FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH                       
Subjt:  --FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH-----------------------

Query:  --------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
                                  RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
Subjt:  --------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG

A0A6J1GXZ1 sister chromatid cohesion 1 protein 1-like isoform X12.3e-7549.74Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LLVE+NEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKS+AK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  -FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKE---------------------------
         FDIE+DE+T  NFA  +QT+IPDT   S PPQD ++EGPPDAE+QD          QHLER+VIQQ Y SKE                           
Subjt:  -FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKE---------------------------

Query:  ----------------------LRHRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS
                               R RT AMSS+KI+ LMDLPPVVL G LFTDG REVYYPAPLL+LWMKSIR P DS S
Subjt:  ----------------------LRHRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS

A0A6J1JET8 sister chromatid cohesion 1 protein 1-like isoform X11.6e-7650Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LLVE+NEAWKVKAAPE TVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKS+AK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  -FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH------------------------
         FDIE+DE+T  NFA  +QT+IPDT  PS PPQD ++EG P+AE+QD          QHLER+VIQQ YESKELR                         
Subjt:  -FDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRH------------------------

Query:  -------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS
                                 RT AMSS+KI+ LMDLPPVVLSG LFTDG REVYYPAPLL+LWMKSIR+P DS S
Subjt:  -------------------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS

SwissProt top hitse value%identityAlignment
O60216 Double-strand-break repair protein rad21 homolog8.5e-1134.29Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVIPK
        MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+ GVV +Y RK K     LL + NEA+ K+K A  P V+  
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVIPK

Query:  GKSLAKFDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDM
               D+ E+       A     +  D  +P P   D+
Subjt:  GKSLAKFDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDM

Q3SWX9 Double-strand-break repair protein rad21 homolog8.5e-1134.29Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVIPK
        MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+ GVV +Y RK K     LL + NEA+ K+K A  P V+  
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVIPK

Query:  GKSLAKFDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDM
               D+ E+       A     +  D  +P P   D+
Subjt:  GKSLAKFDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDM

Q6TEL1 Double-strand-break repair protein rad21 homolog A2.9e-1135Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVIPK
        MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+ GVV +Y RK K     LL + NEA+ K+K A  P V+  
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVIPK

Query:  GKSLAKFDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDM
               D+ ED       A     +  D  +P P   D+
Subjt:  GKSLAKFDIEEDEETHLNFAFGEQTQIPDTSRPSPPPQDM

Q9FQ19 Sister chromatid cohesion 1 protein 31.5e-1540.8Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYG--NLL------------VELNEAW
        MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+ GVV +Y +KV  LY   NLL            V L E  
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYG--NLL------------VELNEAW

Query:  KVKAAPEPTVIPKGKSLAKFDIEED
        + +A PE   +P+  +L +FD+E+D
Subjt:  KVKAAPEPTVIPKGKSLAKFDIEED

Q9S7T7 Sister chromatid cohesion 1 protein 13.7e-3868Show/hide
Query:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVIPKGKSL
        LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L+ ++   LVE+N AW+ K+ P+PT++PKGK+ 
Subjt:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVIPKGKSL

Query:  AKFD---IEEDEETHLNFAFGEQTQ
        A+ +   + E+EE   +F   EQT+
Subjt:  AKFD---IEEDEETHLNFAFGEQTQ

Arabidopsis top hitse value%identityAlignment
AT3G59550.1 Rad21/Rec8-like family protein1.1e-1640.8Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYG--NLL------------VELNEAW
        MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+ GVV +Y +KV  LY   NLL            V L E  
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYG--NLL------------VELNEAW

Query:  KVKAAPEPTVIPKGKSLAKFDIEED
        + +A PE   +P+  +L +FD+E+D
Subjt:  KVKAAPEPTVIPKGKSLAKFDIEED

AT5G05490.1 Rad21/Rec8-like family protein2.6e-3968Show/hide
Query:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVIPKGKSL
        LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L+ ++   LVE+N AW+ K+ P+PT++PKGK+ 
Subjt:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVIPKGKSL

Query:  AKFD---IEEDEETHLNFAFGEQTQ
        A+ +   + E+EE   +F   EQT+
Subjt:  AKFD---IEEDEETHLNFAFGEQTQ

AT5G05490.2 Rad21/Rec8-like family protein2.3e-4369.47Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L+ ++   LVE+N AW+ K+ P+PT++
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVI

Query:  PKGKSLAKFD---IEEDEETHLNFAFGEQTQ
        PKGK+ A+ +   + E+EE   +F   EQT+
Subjt:  PKGKSLAKFD---IEEDEETHLNFAFGEQTQ

AT5G16270.1 sister chromatid cohesion 1 protein 43.0e-1131.97Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY---GNLLVELNEAWKVKAAPEP---
        MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P  P+ALRLS  L+ GVV +Y RKV  L+      L+++ +A++  A   P   
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY---GNLLVELNEAWKVKAAPEP---

Query:  -------TVIPKGKSLAKFDIEEDEETHLNF-----AFGEQTQIPDT
                 +P+   L  F++ ++E    N+     +  EQ  + DT
Subjt:  -------TVIPKGKSLAKFDIEEDEETHLNF-----AFGEQTQIPDT

AT5G40840.1 Rad21/Rec8-like family protein5.9e-0730.58Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSV-PMALRLSGILMGGVVIVYERKVKILY---GNLLVELNEAWKVKAAPEPTV
        MFYSH L++RK PLG IW+AA    K+ + ++   +I    ++IL   +  +  R+   L+ GVV +Y +KV  L+      L+ + E    +   E T 
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSV-PMALRLSGILMGGVVIVYERKVKILY---GNLLVELNEAWKVKAAPEPTV

Query:  IPKGKSLAKFDIEEDEETHLN
        +    S+  F I   E   L+
Subjt:  IPKGKSLAKFDIEEDEETHLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTACTCTCATCAGCTTCTCGCACGAAAGGCTCCTCTAGGCCAAATCTGGATGGCTGCTACAATGCACGCGAAGATCAATCGGAGAAAGCTCGACAAGCTGAACAT
AATCAAAATTTGCGAGGAGATTTTGAATCCTTCAGTTCCGATGGCTCTCAGACTCTCGGGGATTCTCATGGGCGGTGTTGTCATTGTCTATGAACGAAAAGTTAAAATCC
TTTACGGTAACCTTCTAGTTGAGTTAAACGAAGCGTGGAAGGTGAAAGCAGCTCCAGAGCCCACTGTCATTCCCAAAGGAAAATCTCTGGCTAAATTTGATATTGAAGAG
GATGAGGAAACACATCTGAATTTTGCTTTTGGAGAACAAACACAAATTCCAGATACTTCAAGACCTTCCCCTCCTCCTCAAGACATGCACCGAGAAGGACCTCCTGATGC
TGAAATCCAAGATCCACATTTTCATGATGTTGAAATCCCAGAGCAACATCTTGAACGCAATGTCATTCAACAAACCTACGAGTCCAAGGAACTTAGACATAGAACAAGTG
CAATGTCCTCTATTAAGATAAGTGTTCTCATGGACCTTCCACCTGTGGTGTTAAGTGGTAACTTATTCACAGATGGAGGTAGAGAAGTCTATTATCCAGCTCCTCTGCTA
CAATTATGGATGAAAAGTATTCGACACCCCCATGACTCATCTTCTGGT
mRNA sequenceShow/hide mRNA sequence
ATGTTCTACTCTCATCAGCTTCTCGCACGAAAGGCTCCTCTAGGCCAAATCTGGATGGCTGCTACAATGCACGCGAAGATCAATCGGAGAAAGCTCGACAAGCTGAACAT
AATCAAAATTTGCGAGGAGATTTTGAATCCTTCAGTTCCGATGGCTCTCAGACTCTCGGGGATTCTCATGGGCGGTGTTGTCATTGTCTATGAACGAAAAGTTAAAATCC
TTTACGGTAACCTTCTAGTTGAGTTAAACGAAGCGTGGAAGGTGAAAGCAGCTCCAGAGCCCACTGTCATTCCCAAAGGAAAATCTCTGGCTAAATTTGATATTGAAGAG
GATGAGGAAACACATCTGAATTTTGCTTTTGGAGAACAAACACAAATTCCAGATACTTCAAGACCTTCCCCTCCTCCTCAAGACATGCACCGAGAAGGACCTCCTGATGC
TGAAATCCAAGATCCACATTTTCATGATGTTGAAATCCCAGAGCAACATCTTGAACGCAATGTCATTCAACAAACCTACGAGTCCAAGGAACTTAGACATAGAACAAGTG
CAATGTCCTCTATTAAGATAAGTGTTCTCATGGACCTTCCACCTGTGGTGTTAAGTGGTAACTTATTCACAGATGGAGGTAGAGAAGTCTATTATCCAGCTCCTCTGCTA
CAATTATGGATGAAAAGTATTCGACACCCCCATGACTCATCTTCTGGT
Protein sequenceShow/hide protein sequence
MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAWKVKAAPEPTVIPKGKSLAKFDIEE
DEETHLNFAFGEQTQIPDTSRPSPPPQDMHREGPPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRHRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLL
QLWMKSIRHPHDSSSG