; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017168 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017168
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionsister chromatid cohesion 1 protein 1-like
Genome locationscaffold33:241467..244974
RNA-Seq ExpressionMS017168
SyntenyMS017168
Gene Ontology termsGO:0007062 - sister chromatid cohesion (biological process)
GO:0008278 - cohesin complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR006910 - Rad21/Rec8-like protein, N-terminal
IPR039781 - Rad21/Rec8-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146768.1 LOW QUALITY PROTEIN: sister chromatid cohesion 1 protein 1-like [Momordica charantia]8.0e-9657.85Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRL GILMGGVVIVYERKVKILY +   LLVELNEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  --FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREG--------PHFPDVEIPEQHLERNVIQQTYESKEL-------------------------
          FDIEEDEETHLNFA  EQTQIPDTSRPSPPPQDMHREG        PHF DVEIPEQHLERNVIQQTYESKEL                         
Subjt:  --FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREG--------PHFPDVEIPEQHLERNVIQQTYESKEL-------------------------

Query:  ------------------------RQRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
                                R+RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
Subjt:  ------------------------RQRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG

XP_022146858.1 sister chromatid cohesion 1 protein 1-like [Momordica charantia]1.2e-9658.12Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRL GILMGGVVIVYERKVKILY +   LLVELNEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  --FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREG--------PHFPDVEIPEQHLERNVIQQTYESKEL-------------------------
          FDIEEDEETHLNFA GEQTQIPDTSRPSPPPQDMHREG        PHF DVEIPEQHLERNVIQQTYESKEL                         
Subjt:  --FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREG--------PHFPDVEIPEQHLERNVIQQTYESKEL-------------------------

Query:  ------------------------RQRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
                                R+RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
Subjt:  ------------------------RQRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG

XP_022985848.1 sister chromatid cohesion 1 protein 1-like isoform X1 [Cucurbita maxima]1.4e-7650.81Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LLVE+NEAWKVKAAPE TVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKS+AK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  -FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELRQ--------------------------------
         FDIE+DE+T  NFAS +QT+IPDT  PS PPQD ++EG   P+ E+ +QHLER+VIQQ YESKELRQ                                
Subjt:  -FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELRQ--------------------------------

Query:  -----------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS
                         RT AMSS+KI+ LMDLPPVVLSG LFTDG REVYYPAPLL+LWMKSIR+P DS S
Subjt:  -----------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS

XP_023552287.1 sister chromatid cohesion 1 protein 1-like [Cucurbita pepo subsp. pepo]3.0e-7951.88Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LLVE+NEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKS+AK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  -FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELRQ--------------------------------
         FDIE+DE+T  NFAS +QT+IPDT  PS PPQD H+EGP  PD E+ +QHLER+VIQQ YESKELRQ                                
Subjt:  -FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELRQ--------------------------------

Query:  -----------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS
                         RT AMSS+KI+ LMDLPPVVLSG LFTDG REVYYPAPLL+LWMKSIR P DS S
Subjt:  -----------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS

XP_038891624.1 sister chromatid cohesion 1 protein 1 [Benincasa hispida]1.2e-7550.13Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LLVE+NEAWK+K APEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELR----------------------------------
        FDIEEDE+T  NFAS +QTQIPDT RPS PPQ+ + EGP  PD E+ +QHLERNVIQ  +ESKE R                                  
Subjt:  FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELR----------------------------------

Query:  ---------------QRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS
                       QRT AM ++KI+ LMDLPPVVLS  LFTDG REVYYPAPLL+LWM+SIR P  S S
Subjt:  ---------------QRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS

TrEMBL top hitse value%identityAlignment
A0A0A0KM61 Rad21_Rec8_N domain-containing protein1.5e-8776.29Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSH LLARKAPLGQIWMAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LL+E+NEAWKVKAAPEPT +
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAKFDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELR-QRTSAMSSIKISVLMDLPPVVLSGN
        PKGKSLAKFDIEED +T  +FAS +QTQIP T RP PPP D + EGP  PD E+ +QHLE  V Q   ESKELR QRT  M + KI+ LMDLPPVVLS  
Subjt:  PKGKSLAKFDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELR-QRTSAMSSIKISVLMDLPPVVLSGN

Query:  LFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
        LFT+G RE YYPAPLL+LWM+SIR P DS SG
Subjt:  LFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG

A0A6J1CZF6 LOW QUALITY PROTEIN: sister chromatid cohesion 1 protein 1-like3.9e-9657.85Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRL GILMGGVVIVYERKVKILY +   LLVELNEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  --FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREG--------PHFPDVEIPEQHLERNVIQQTYESKEL-------------------------
          FDIEEDEETHLNFA  EQTQIPDTSRPSPPPQDMHREG        PHF DVEIPEQHLERNVIQQTYESKEL                         
Subjt:  --FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREG--------PHFPDVEIPEQHLERNVIQQTYESKEL-------------------------

Query:  ------------------------RQRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
                                R+RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
Subjt:  ------------------------RQRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG

A0A6J1CZP0 sister chromatid cohesion 1 protein 1-like6.0e-9758.12Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRL GILMGGVVIVYERKVKILY +   LLVELNEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKSLAK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  --FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREG--------PHFPDVEIPEQHLERNVIQQTYESKEL-------------------------
          FDIEEDEETHLNFA GEQTQIPDTSRPSPPPQDMHREG        PHF DVEIPEQHLERNVIQQTYESKEL                         
Subjt:  --FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREG--------PHFPDVEIPEQHLERNVIQQTYESKEL-------------------------

Query:  ------------------------RQRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
                                R+RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG
Subjt:  ------------------------RQRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSSG

A0A6J1GXZ1 sister chromatid cohesion 1 protein 1-like isoform X19.9e-7650.54Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LLVE+NEAWKVKAAPEPTVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKS+AK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  -FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELRQ--------------------------------
         FDIE+DE+T  NFAS +QT+IPDT   S PPQD ++EGP  PD E+ +QHLER+VIQQ Y SKE RQ                                
Subjt:  -FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELRQ--------------------------------

Query:  -----------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS
                         RT AMSS+KI+ LMDLPPVVL G LFTDG REVYYPAPLL+LWMKSIR P DS S
Subjt:  -----------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS

A0A6J1JET8 sister chromatid cohesion 1 protein 1-like isoform X16.9e-7750.81Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +   LLVE+NEAWKVKAAPE TVI
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN---LLVELNEAWKVKAAPEPTVI

Query:  PKGKSLAK--------------------------------------------------------------------------------------------
        PKGKS+AK                                                                                            
Subjt:  PKGKSLAK--------------------------------------------------------------------------------------------

Query:  -FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELRQ--------------------------------
         FDIE+DE+T  NFAS +QT+IPDT  PS PPQD ++EG   P+ E+ +QHLER+VIQQ YESKELRQ                                
Subjt:  -FDIEEDEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELRQ--------------------------------

Query:  -----------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS
                         RT AMSS+KI+ LMDLPPVVLSG LFTDG REVYYPAPLL+LWMKSIR+P DS S
Subjt:  -----------------RTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIRHPHDSSS

SwissProt top hitse value%identityAlignment
O60216 Double-strand-break repair protein rad21 homolog2.2e-1141.84Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVI
        MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+ GVV +Y RK K     LL + NEA+ K+K A  P V+
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVI

Q3SWX9 Double-strand-break repair protein rad21 homolog2.2e-1141.84Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVI
        MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+ GVV +Y RK K     LL + NEA+ K+K A  P V+
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVI

Q61550 Double-strand-break repair protein rad21 homolog2.2e-1141.84Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVI
        MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+ GVV +Y RK K     LL + NEA+ K+K A  P V+
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAW-KVKAAPEPTVI

Q9FQ19 Sister chromatid cohesion 1 protein 31.4e-1540.8Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYG--NLL------------VELNEAW
        MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+ GVV +Y +KV  LY   NLL            V L E  
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYG--NLL------------VELNEAW

Query:  KVKAAPEPTVIPKGKSLAKFDIEED
        + +A PE   +P+  +L +FD+E+D
Subjt:  KVKAAPEPTVIPKGKSLAKFDIEED

Q9S7T7 Sister chromatid cohesion 1 protein 12.7e-3868Show/hide
Query:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVIPKGKSL
        LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L+ ++   LVE+N AW+ K+ P+PT++PKGK+ 
Subjt:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVIPKGKSL

Query:  AKFD---IEEDEETHLNFASGEQTQ
        A+ +   + E+EE   +F   EQT+
Subjt:  AKFD---IEEDEETHLNFASGEQTQ

Arabidopsis top hitse value%identityAlignment
AT3G59550.1 Rad21/Rec8-like family protein1.0e-1640.8Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYG--NLL------------VELNEAW
        MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+ GVV +Y +KV  LY   NLL            V L E  
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYG--NLL------------VELNEAW

Query:  KVKAAPEPTVIPKGKSLAKFDIEED
        + +A PE   +P+  +L +FD+E+D
Subjt:  KVKAAPEPTVIPKGKSLAKFDIEED

AT5G05490.1 Rad21/Rec8-like family protein1.9e-3968Show/hide
Query:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVIPKGKSL
        LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L+ ++   LVE+N AW+ K+ P+PT++PKGK+ 
Subjt:  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVIPKGKSL

Query:  AKFD---IEEDEETHLNFASGEQTQ
        A+ +   + E+EE   +F   EQT+
Subjt:  AKFD---IEEDEETHLNFASGEQTQ

AT5G05490.2 Rad21/Rec8-like family protein1.7e-4369.47Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVI
        MFYSHQLLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L+ ++   LVE+N AW+ K+ P+PT++
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNL---LVELNEAWKVKAAPEPTVI

Query:  PKGKSLAKFD---IEEDEETHLNFASGEQTQ
        PKGK+ A+ +   + E+EE   +F   EQT+
Subjt:  PKGKSLAKFD---IEEDEETHLNFASGEQTQ

AT5G16270.1 sister chromatid cohesion 1 protein 41.7e-1131.97Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY---GNLLVELNEAWKVKAAPEP---
        MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P  P+ALRLS  L+ GVV +Y RKV  L+      L+++ +A++  A   P   
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY---GNLLVELNEAWKVKAAPEP---

Query:  -------TVIPKGKSLAKFDIEEDEETHLNF-----ASGEQTQIPDT
                 +P+   L  F++ ++E    N+     ++ EQ  + DT
Subjt:  -------TVIPKGKSLAKFDIEEDEETHLNF-----ASGEQTQIPDT

AT5G40840.1 Rad21/Rec8-like family protein7.4e-0730.58Show/hide
Query:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSV-PMALRLSGILMGGVVIVYERKVKILY---GNLLVELNEAWKVKAAPEPTV
        MFYSH L++RK PLG IW+AA    K+ + ++   +I    ++IL   +  +  R+   L+ GVV +Y +KV  L+      L+ + E    +   E T 
Subjt:  MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSV-PMALRLSGILMGGVVIVYERKVKILY---GNLLVELNEAWKVKAAPEPTV

Query:  IPKGKSLAKFDIEEDEETHLN
        +    S+  F I   E   L+
Subjt:  IPKGKSLAKFDIEEDEETHLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTACTCTCATCAGCTTCTCGCACGAAAGGCTCCTCTAGGCCAAATCTGGATGGCTGCTACAATGCACGCGAAGATCAATCGGAGAAAGCTCGACAAGCTGAACAT
AATCAAAATTTGCGAGGAGATTTTGAATCCTTCAGTTCCGATGGCTCTCAGACTCTCGGGGATTCTCATGGGCGGTGTTGTCATTGTCTATGAACGAAAAGTTAAAATCC
TTTACGGTAACCTTCTAGTTGAGTTAAACGAAGCGTGGAAGGTGAAAGCAGCTCCAGAGCCCACTGTCATTCCCAAAGGAAAATCTCTGGCTAAATTTGATATTGAAGAG
GATGAGGAAACACATCTGAATTTTGCTTCTGGAGAACAAACACAAATTCCAGATACTTCAAGACCTTCCCCTCCTCCTCAAGACATGCACCGAGAAGGTCCACATTTTCC
TGATGTTGAAATCCCAGAGCAACATCTTGAACGCAATGTTATTCAACAAACCTACGAGTCCAAGGAACTTAGACAACGAACAAGTGCAATGTCCTCTATTAAGATAAGTG
TTCTCATGGACCTTCCACCTGTGGTGTTAAGTGGTAACTTATTCACAGATGGAGGTAGAGAAGTCTATTATCCAGCTCCTCTACTACAATTATGGATGAAAAGTATTCGA
CACCCCCATGACTCATCTTCTGGT
mRNA sequenceShow/hide mRNA sequence
ATGTTCTACTCTCATCAGCTTCTCGCACGAAAGGCTCCTCTAGGCCAAATCTGGATGGCTGCTACAATGCACGCGAAGATCAATCGGAGAAAGCTCGACAAGCTGAACAT
AATCAAAATTTGCGAGGAGATTTTGAATCCTTCAGTTCCGATGGCTCTCAGACTCTCGGGGATTCTCATGGGCGGTGTTGTCATTGTCTATGAACGAAAAGTTAAAATCC
TTTACGGTAACCTTCTAGTTGAGTTAAACGAAGCGTGGAAGGTGAAAGCAGCTCCAGAGCCCACTGTCATTCCCAAAGGAAAATCTCTGGCTAAATTTGATATTGAAGAG
GATGAGGAAACACATCTGAATTTTGCTTCTGGAGAACAAACACAAATTCCAGATACTTCAAGACCTTCCCCTCCTCCTCAAGACATGCACCGAGAAGGTCCACATTTTCC
TGATGTTGAAATCCCAGAGCAACATCTTGAACGCAATGTTATTCAACAAACCTACGAGTCCAAGGAACTTAGACAACGAACAAGTGCAATGTCCTCTATTAAGATAAGTG
TTCTCATGGACCTTCCACCTGTGGTGTTAAGTGGTAACTTATTCACAGATGGAGGTAGAGAAGTCTATTATCCAGCTCCTCTACTACAATTATGGATGAAAAGTATTCGA
CACCCCCATGACTCATCTTCTGGT
Protein sequenceShow/hide protein sequence
MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGNLLVELNEAWKVKAAPEPTVIPKGKSLAKFDIEE
DEETHLNFASGEQTQIPDTSRPSPPPQDMHREGPHFPDVEIPEQHLERNVIQQTYESKELRQRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVYYPAPLLQLWMKSIR
HPHDSSSG