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MS017199 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017199
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein yippee-like
Genome locationscaffold33:638417..640364
RNA-Seq ExpressionMS017199
SyntenyMS017199
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004910 - Yippee/Mis18/Cereblon
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156902.1 protein yippee-like [Momordica charantia]1.3e-3877.78Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEGQIYSCKYCGTHLALYDDIISK         F   H          +LF   VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

XP_031740894.1 protein yippee-like isoform X2 [Cucumis sativus]5.2e-3571.55Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISK-VSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYETA
        MGRLFVVNLEGQIYSCK+C THLALYDDIISK +          +  +  S+        RVNV  GKIE+RLMMTGMHTVADIFCVGCGS+VGWKYETA
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISK-VSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYETA

Query:  HEKNQKYKEGKSVLER
        HEKNQKYKEGKSVLER
Subjt:  HEKNQKYKEGKSVLER

XP_031740895.1 protein yippee-like isoform X4 [Cucumis sativus]5.2e-3572.65Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEGQIYSCK+C THLALYDDIISK         F   H          +LF   VNV  GKIE+RLMMTGMHTVADIFCVGCGS+VGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

XP_038893239.1 protein yippee-like isoform X1 [Benincasa hispida]4.7e-3674.36Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEGQIYSCKYC THLALYDDIISK         F   H          +LF   VNV  GKIE+RLMMTGMHTVADIFCVGCGSIVGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

XP_038893240.1 protein yippee-like isoform X2 [Benincasa hispida]8.0e-3674.36Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEGQIYSCKYC THLALYDDIISK         F   H          +LF   VNV  GKIE+RLMMTGMHTVADIFCVGCGSIVGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

TrEMBL top hitse value%identityAlignment
A0A0A0KQH0 Yippee domain-containing protein2.5e-3572.65Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEGQIYSCK+C THLALYDDIISK         F   H          +LF   VNV  GKIE+RLMMTGMHTVADIFCVGCGS+VGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

A0A1S4E425 Protein yippee-like7.3e-3571.79Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEGQIYSCK+C THLALY+DIISK         F   H          +LF   VNV  GKIE+RLMMTGMHTVADIFCVGCGS+VGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

A0A5D3BCE7 Protein yippee-like7.3e-3571.79Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEGQIYSCK+C THLALY+DIISK         F   H          +LF   VNV  GKIE+RLMMTGMHTVADIFCVGCGS+VGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

A0A6J1DRW0 Protein yippee-like6.4e-3977.78Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEGQIYSCKYCGTHLALYDDIISK         F   H          +LF   VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

A0A6J1JI75 Protein yippee-like1.1e-3370.94Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEGQIYSCKYC THLALY DIISK         F   H          +LF   VNV  GKIE+RLMMTGMHTVAD+FCVGCGSIVGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEK+QKYKEGK VLER
Subjt:  AHEKNQKYKEGKSVLER

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like7.8e-3466.09Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYETAH
        MGRLFV+ LEG+IYSCK+CGTHLAL ++I+SK         F   H          F   VNV+SG+IE+R+MMTGMHTVADIFCV CGSIVGWKYETAH
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYETAH

Query:  EKNQKYKEGKSVLER
        EK+QKYKEGKSVLER
Subjt:  EKNQKYKEGKSVLER

Q9C777 Protein yippee-like At3g112304.0e-3060.68Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISK--VSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLF+VNLEG+ YSCK+C T+LAL DD++SK   S     ++FS +               VNV +GK EDR+MMTGMHTV DI+CV CGS VGWKYE 
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISK--VSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        A EKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

Q9FN32 Protein yippee-like At5g539402.1e-2653.91Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYETAH
        MGR+F V LEG+ Y C++C THLAL DD++S+             H       +  F   VN+S G +E+RLM++GMHTVADIFC  CG  VGWKYE+AH
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYETAH

Query:  EKNQKYKEGKSVLER
        EK QKYKEGK VLER
Subjt:  EKNQKYKEGKSVLER

Q9LY56 Protein yippee-like At3g558901.2e-2656.14Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYETAH
        MGR+F+V+LEG IY CK C THL+   DI+SK         +   +V             VNVS G+ EDR+M+TG+H V DIFCVGCGS VGWKYE AH
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYETAH

Query:  EKNQKYKEGKSVLE
        EK+QKYKEGKSVLE
Subjt:  EKNQKYKEGKSVLE

Q9SR97 Protein yippee-like At3g089906.4e-2855.46Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLH----VVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKY
        MGRLFV++LEG +YSCKYC TH A+ +DIISK         F   H    + D+V         VNV+ G+ E R+M+TG HTVADIFCV CGS+VGWKY
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLH----VVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKY

Query:  ETAHEKNQKYKEGKSVLER
        E A++K+QKYKEGK +LER
Subjt:  ETAHEKNQKYKEGKSVLER

Arabidopsis top hitse value%identityAlignment
AT2G40110.1 Yippee family putative zinc-binding protein1.5e-3567.52Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEG+IYSCK+C THLA Y+DIISK         F   H          +LF    NVS G+ E+RLMMTG HTVADIFCV CGSIVGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

AT2G40110.2 Yippee family putative zinc-binding protein1.5e-3567.52Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLFVVNLEG+IYSCK+C THLA Y+DIISK         F   H          +LF    NVS G+ E+RLMMTG HTVADIFCV CGSIVGWKYET
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFR--VNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        AHEKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

AT3G08990.1 Yippee family putative zinc-binding protein4.5e-2955.46Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLH----VVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKY
        MGRLFV++LEG +YSCKYC TH A+ +DIISK         F   H    + D+V         VNV+ G+ E R+M+TG HTVADIFCV CGS+VGWKY
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLH----VVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKY

Query:  ETAHEKNQKYKEGKSVLER
        E A++K+QKYKEGK +LER
Subjt:  ETAHEKNQKYKEGKSVLER

AT3G11230.1 Yippee family putative zinc-binding protein2.8e-3160.68Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISK--VSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLF+VNLEG+ YSCK+C T+LAL DD++SK   S     ++FS +               VNV +GK EDR+MMTGMHTV DI+CV CGS VGWKYE 
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISK--VSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        A EKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER

AT3G11230.2 Yippee family putative zinc-binding protein2.8e-3160.68Show/hide
Query:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISK--VSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET
        MGRLF+VNLEG+ YSCK+C T+LAL DD++SK   S     ++FS +               VNV +GK EDR+MMTGMHTV DI+CV CGS VGWKYE 
Subjt:  MGRLFVVNLEGQIYSCKYCGTHLALYDDIISK--VSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYET

Query:  AHEKNQKYKEGKSVLER
        A EKNQKYKEGKSVLER
Subjt:  AHEKNQKYKEGKSVLER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGATTGTTCGTGGTGAATCTGGAGGGGCAGATCTATAGTTGCAAGTACTGCGGAACCCATCTTGCTCTTTACGACGATATCATCTCCAAGGTTTCTCTTCTTTT
ACCTGTTTTTGTTTTCTCTGTGCTTCATGTCGTAGACTCGGTTCTCATGGTCGGGTTTTTTCTTTTCAGGGTAAACGTCTCCTCCGGTAAGATAGAAGATAGATTGATGA
TGACGGGGATGCATACGGTTGCTGATATCTTCTGTGTGGGGTGTGGATCAATAGTGGGGTGGAAATATGAGACTGCCCATGAAAAGAACCAAAAATACAAGGAGGGAAAA
TCTGTACTTGAGAGG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGATTGTTCGTGGTGAATCTGGAGGGGCAGATCTATAGTTGCAAGTACTGCGGAACCCATCTTGCTCTTTACGACGATATCATCTCCAAGGTTTCTCTTCTTTT
ACCTGTTTTTGTTTTCTCTGTGCTTCATGTCGTAGACTCGGTTCTCATGGTCGGGTTTTTTCTTTTCAGGGTAAACGTCTCCTCCGGTAAGATAGAAGATAGATTGATGA
TGACGGGGATGCATACGGTTGCTGATATCTTCTGTGTGGGGTGTGGATCAATAGTGGGGTGGAAATATGAGACTGCCCATGAAAAGAACCAAAAATACAAGGAGGGAAAA
TCTGTACTTGAGAGG
Protein sequenceShow/hide protein sequence
MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYETAHEKNQKYKEGK
SVLER