CuGenDBv2

Gene ID	MS017222
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	60S ribosomal protein L35a-1
Genome location	scaffold33:796940..797291
RNA-Seq Expression	MS017222
Synteny	MS017222
Gene Ontology terms	GO:0002181 - cytoplasmic translation (biological process) GO:0042273 - ribosomal large subunit biogenesis (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008463199.1 PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo]

2.1e-44

98.89

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

XP_022139205.1 60S ribosomal protein L35a-1-like [Momordica charantia]

7.4e-45

100

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Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

XP_022156649.1 60S ribosomal protein L35a-1-like [Momordica charantia]

6.2e-44

98.89

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Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNL PKSMGDRVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

XP_022156899.1 60S ribosomal protein L35a-1 [Momordica charantia]

7.4e-45

100

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Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

XP_022957040.1 60S ribosomal protein L35a-1 [Cucurbita moschata]

2.1e-44

98.89

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM11 Uncharacterized protein

1.0e-44

98.89

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

A0A5A7T1I6 Ribosomal protein L35A

1.0e-44

98.89

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

A0A6J1CBN5 60S ribosomal protein L35a-1-like

3.6e-45

100

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Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

A0A6J1DUY8 60S ribosomal protein L35a-1

3.6e-45

100

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Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

A0A6J1IM24 60S ribosomal protein L35a-1-like

1.0e-44

98.89

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

SwissProt top hits

e value

%identity

Alignment

P51422 60S ribosomal protein L35a-4

7.9e-42

85.56

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

Q9C912 60S ribosomal protein L35a-3

3.6e-42

85.56

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Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

Q9FZH0 60S ribosomal protein L35a-2

6.1e-42

85.56

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

Q9LMK0 60S ribosomal protein L35a-1

3.6e-42

85.56

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Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

Q9USX4 60S ribosomal protein L33-A

4.8e-23

53.33

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Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSK   +P TSL++IEG +SK+E  +Y GKR+ ++YK+     G+  R IWG V+RPHGNSG+VRA+F  NLPPK+ G  +RV +YPSN+
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

Arabidopsis top hits

e value

%identity

Alignment

AT1G07070.1 Ribosomal protein L35Ae family protein

2.5e-43

85.56

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

AT1G41880.1 Ribosomal protein L35Ae family protein

4.3e-43

85.56

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

AT1G74270.1 Ribosomal protein L35Ae family protein

2.5e-43

85.56

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

AT3G55750.1 Ribosomal protein L35Ae family protein

5.6e-43

85.56

Show/hide

Query:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
        RSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Subjt:  RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

Sequences

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CDS sequence

Show/hide CDS sequence

AGGTCTAAATCCAACCAGTATCCGAACACTTCATTACTCCAGATCGAGGGTGTTAATTCCAAGGATGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAA
GGCTAAAGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGGGCAAGGTCGCCAGGCCTCATGGTAACAGTGGCATTGTTAGAGCGAAGTTTAAGTCTAATCTGCCAC
CAAAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATT

mRNA sequence

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Protein sequence

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RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI

MS017222 (gene) of Bitter gourd (TR) v1 genome