; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017229 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017229
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProline transporter 1
Genome locationscaffold33:867426..867914
RNA-Seq ExpressionMS017229
SyntenyMS017229
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS70261.1 Os01g0136050, partial [Oryza sativa Japonica Group]2.8e-3465.61Show/hide
Query:  MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS
        +SM F SGF +S LGTVTV TPFSMLAFT STLAFSGSLN  MN PLLRS  CHLSF SS SLL  PLI  TLPSSTSTFTSSFL PGRSALKT   GVS
Subjt:  MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGIS
        FQS R LAKA VS +E      A   E   PS GS  S+ KGS  LLR    ++G+S
Subjt:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGIS

KAB8079852.1 hypothetical protein EE612_000127, partial [Oryza sativa]2.0e-3263.69Show/hide
Query:  MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS
        +SM F SG  +S LGTVTV TPFSMLAFT STLAFSGS N  MN PLLRS  CHLSF SS SLL  PLI  TLPSSTSTFTSSF  PGRSALKT   GVS
Subjt:  MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGIS
        FQS R LAKA VS +E      A   E   PS GS  S+ KGS  LLR    ++G+S
Subjt:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGIS

KVI11914.1 hypothetical protein Ccrd_009654, partial [Cynara cardunculus var. scolymus]9.3e-3865.36Show/hide
Query:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQSIRV
        +GFF+S  GTV V TPFS+ AFT S  AFSG+LNLL+NFPLLRS LCH+SF SS S  LSPLIC+ L SSTSTFTSSFLIPGRSALKT A GVSFQS RV
Subjt:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQSIRV

Query:  LAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDM
          KAEVS  E    ++  E+  G   NGS  S   GSKML RRPPK LG+ D+
Subjt:  LAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDM

RWR97332.1 hypothetical protein CKAN_02676000 [Cinnamomum micranthum f. kanehirae]2.0e-3276.11Show/hide
Query:  MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS
        MSM  +SGF +  LGTVTV TPFS+ AFTSSTLAFSG+LN L N PLL S  CHLSFFSS SLLLSPLI RTLPSS+STFTSSF  PGRSALKTWA GVS
Subjt:  MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVS
        FQSI+ L KA+VS
Subjt:  FQSIRVLAKAEVS

VFQ82571.1 unnamed protein product [Cuscuta campestris]2.1e-3765.22Show/hide
Query:  MDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ
        MD  SGFF+S LGTVTV TPFSM AFT S  AFSGS N   N PLLRS  CHLS FSS SLLLSPLIC+ LPSSTSTFTSSF  PGRSAL TW  GVSFQ
Subjt:  MDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLR-RPPKMLGISDMLLQ
        SIR  A A+VS      L      ENGNP  GS  S E GS   LR RPPK LGI ++L Q
Subjt:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLR-RPPKMLGISDMLLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KSC0 Uncharacterized protein2.2e-6183.95Show/hide
Query:  MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS
        MSMD ISGFFSSILGT+TVRTPFSMLAFTSSTLAFSGSLNLLMNFP LRSILCHLSFFSSCSLLLSPLIC+TLPSSTST TSSFLIPGRSALK WACGVS
Subjt:  MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDMLLQ
        FQS+RVLAKAEVS AEE ALA   E E G PS GS  S+EKGSK LLRRPPKMLG   M+++
Subjt:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDMLLQ

A0A0P0UXN9 Os01g0136050 protein (Fragment)1.4e-3465.61Show/hide
Query:  MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS
        +SM F SGF +S LGTVTV TPFSMLAFT STLAFSGSLN  MN PLLRS  CHLSF SS SLL  PLI  TLPSSTSTFTSSFL PGRSALKT   GVS
Subjt:  MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGIS
        FQS R LAKA VS +E      A   E   PS GS  S+ KGS  LLR    ++G+S
Subjt:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGIS

A0A103YMN4 Uncharacterized protein (Fragment)4.5e-3865.36Show/hide
Query:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQSIRV
        +GFF+S  GTV V TPFS+ AFT S  AFSG+LNLL+NFPLLRS LCH+SF SS S  LSPLIC+ L SSTSTFTSSFLIPGRSALKT A GVSFQS RV
Subjt:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQSIRV

Query:  LAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDM
          KAEVS  E    ++  E+  G   NGS  S   GSKML RRPPK LG+ D+
Subjt:  LAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDM

A0A484M1B1 Uncharacterized protein1.0e-3765.22Show/hide
Query:  MDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ
        MD  SGFF+S LGTVTV TPFSM AFT S  AFSGS N   N PLLRS  CHLS FSS SLLLSPLIC+ LPSSTSTFTSSF  PGRSAL TW  GVSFQ
Subjt:  MDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLR-RPPKMLGISDMLLQ
        SIR  A A+VS      L      ENGNP  GS  S E GS   LR RPPK LGI ++L Q
Subjt:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLR-RPPKMLGISDMLLQ

A0A7C9D9Y3 Uncharacterized protein1.6e-4067.09Show/hide
Query:  MDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ
        M F SGFFSS LGTVTV TPFS+ AFTSS LAFSG  N   N PL RS  CHLSFFSSCSL+LSPLI R LPSSTSTFTSSFL PGRS L TWA GVSFQ
Subjt:  MDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDML
        S  VL   +VS A E         E+ NPSNGS TS E GS  L+ R PK LGISDM+
Subjt:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGGACTTTATTTCAGGCTTCTTCTCTTCCATTTTAGGCACCGTCACAGTGAGAACTCCATTCTCCATGCTGGCCTTCACCTCCTCAACTTTGGCATTCTCCGG
CAGCCTGAATCTCCTCATGAACTTTCCACTGCTCCGCTCGATTCTGTGCCACTTGTCGTTCTTCTCCTCCTGCTCTCTGCTTCTCTCTCCACTGATCTGCAGAACTCTTC
CCTCTTCAACCTCCACTTTCACTTCCTCCTTTTTGATCCCTGGAAGATCGGCCTTGAAGACGTGGGCTTGTGGGGTCTCCTTCCAGTCGATTCGAGTGTTGGCAAAAGCA
GAGGTTTCCGAAGCGGAGGAATGGGCGTTGGCCAATGCGGTGGAATTGGAAAATGGGAACCCATCGAACGGATCCCATACATCCAGTGAGAAGGGGTCGAAGATGTTGCT
GCGGCGGCCACCGAAAATGCTTGGAATCAGCGACATGCTTCTTCAAATT
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGGACTTTATTTCAGGCTTCTTCTCTTCCATTTTAGGCACCGTCACAGTGAGAACTCCATTCTCCATGCTGGCCTTCACCTCCTCAACTTTGGCATTCTCCGG
CAGCCTGAATCTCCTCATGAACTTTCCACTGCTCCGCTCGATTCTGTGCCACTTGTCGTTCTTCTCCTCCTGCTCTCTGCTTCTCTCTCCACTGATCTGCAGAACTCTTC
CCTCTTCAACCTCCACTTTCACTTCCTCCTTTTTGATCCCTGGAAGATCGGCCTTGAAGACGTGGGCTTGTGGGGTCTCCTTCCAGTCGATTCGAGTGTTGGCAAAAGCA
GAGGTTTCCGAAGCGGAGGAATGGGCGTTGGCCAATGCGGTGGAATTGGAAAATGGGAACCCATCGAACGGATCCCATACATCCAGTGAGAAGGGGTCGAAGATGTTGCT
GCGGCGGCCACCGAAAATGCTTGGAATCAGCGACATGCTTCTTCAAATT
Protein sequenceShow/hide protein sequence
MSMDFISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQSIRVLAKA
EVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDMLLQI