; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017233 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017233
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProline transporter 1
Genome locationscaffold33:876285..876773
RNA-Seq ExpressionMS017233
SyntenyMS017233
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS70261.1 Os01g0136050, partial [Oryza sativa Japonica Group]1.3e-3164.33Show/hide
Query:  MSMDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVS
        +SM   SGF +S LGTVTV  PFSMLAFT STLAFSGSLN  MN PLLRS  CHLSF SS SLL  PLI  TLPSSTST TSSFL PGRSALKT   GVS
Subjt:  MSMDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGIS
        FQS R LAKA VS +E   +A   E     PS GSQ S+ KGS  LLR     +G+S
Subjt:  FQSIRVLAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGIS

CAG1834096.1 unnamed protein product [Musa acuminata subsp. malaccensis]2.0e-3261.39Show/hide
Query:  MDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQ
        MDL SGF +  LGTVTV  PFSM AFT STLAFSG  NL  N PLLRS  C +S FSSCS L SPLI RT PSSTST+TSSFL PG+SAL T A GVSFQ
Subjt:  MDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGISDML
        S R  A A+ S     A     E+  GKP  GSQ S EKGSKM  R  P   G+SD+L
Subjt:  SIRVLAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGISDML

KVI11914.1 hypothetical protein Ccrd_009654, partial [Cynara cardunculus var. scolymus]2.4e-3866.01Show/hide
Query:  SGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQSIRV
        +GFF+S  GTV V  PFS+ AFT S  AFSG+LNLL+NFPLLRS LCH+SF SS S  LSPLIC+ L SSTST TSSFLIPGRSALKT A GVSFQS RV
Subjt:  SGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQSIRV

Query:  LAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGISDM
          KAEVS  E    ++  E+G GK  NGSQ S   GSKML R PPKKLG+ D+
Subjt:  LAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGISDM

RWR97332.1 hypothetical protein CKAN_02676000 [Cinnamomum micranthum f. kanehirae]2.2e-3175.22Show/hide
Query:  MSMDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVS
        MSM L+SGF +  LGTVTV  PFS+ AFTSSTLAFSG+LN L N PLL S  CHLSFFSS SLLLSPLI RTLPSS+ST TSSF  PGRSALKTWA GVS
Subjt:  MSMDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVS
        FQSI+ L KA+VS
Subjt:  FQSIRVLAKAEVS

VFQ82571.1 unnamed protein product [Cuscuta campestris]1.9e-3563.98Show/hide
Query:  MDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQ
        MDL SGFF+S LGTVTV  PFSM AFT S  AFSGS N   N PLLRS  CHLS FSS SLLLSPLIC+ LPSSTST TSSF  PGRSAL TW  GVSFQ
Subjt:  MDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLR-WPPKKLGISDMLLQ
        SIR  A A+VS      L       NG P  GSQ S E GS   LR  PPKKLGI ++L Q
Subjt:  SIRVLAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLR-WPPKKLGISDMLLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KSC0 Uncharacterized protein1.9e-6083.95Show/hide
Query:  MSMDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVS
        MSMDLISGFFSSILGT+TVR PFSMLAFTSSTLAFSGSLNLLMNFP LRSILCHLSFFSSCSLLLSPLIC+TLPSSTSTLTSSFLIPGRSALK WACGVS
Subjt:  MSMDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGISDMLLQ
        FQS+RVLAKAEVS AEE ALA   E   GKPS GSQ S+EKGSK LLR PPK LG   M+++
Subjt:  FQSIRVLAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGISDMLLQ

A0A0D9Z549 SHSP domain-containing protein1.3e-3264.47Show/hide
Query:  MDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQ
        MDL SGF  S LGTVTV  PFSM A   S L FSGS NL  N PLLRS  CHLS FSSCSLL SPLICR LPSSTSTLTSSF  PG SAL T A GVSFQ
Subjt:  MDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSE----AEEWALANAVEL--GNGKPSNGSQTSSEKGSKMLLR
        S+R  AKA VSE     ++  +   + L    GKPS GSQ S EKGS MLLR
Subjt:  SIRVLAKAEVSE----AEEWALANAVEL--GNGKPSNGSQTSSEKGSKMLLR

A0A103YMN4 Uncharacterized protein (Fragment)1.2e-3866.01Show/hide
Query:  SGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQSIRV
        +GFF+S  GTV V  PFS+ AFT S  AFSG+LNLL+NFPLLRS LCH+SF SS S  LSPLIC+ L SSTST TSSFLIPGRSALKT A GVSFQS RV
Subjt:  SGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQSIRV

Query:  LAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGISDM
          KAEVS  E    ++  E+G GK  NGSQ S   GSKML R PPKKLG+ D+
Subjt:  LAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGISDM

A0A484M1B1 Uncharacterized protein9.4e-3663.98Show/hide
Query:  MDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQ
        MDL SGFF+S LGTVTV  PFSM AFT S  AFSGS N   N PLLRS  CHLS FSS SLLLSPLIC+ LPSSTST TSSF  PGRSAL TW  GVSFQ
Subjt:  MDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLR-WPPKKLGISDMLLQ
        SIR  A A+VS      L       NG P  GSQ S E GS   LR  PPKKLGI ++L Q
Subjt:  SIRVLAKAEVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLR-WPPKKLGISDMLLQ

A0A7C9D9Y3 Uncharacterized protein5.9e-3866.04Show/hide
Query:  MDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQ
        M   SGFFSS LGTVTV  PFS+ AFTSS LAFSG  N   N PL RS  CHLSFFSSCSL+LSPLI R LPSSTST TSSFL PGRS L TWA GVSFQ
Subjt:  MDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELGNGK-PSNGSQTSSEKGSKMLLRWPPKKLGISDML
        S  VL   +VS A E  L   +E    K PSNGSQTS E GS  L+   PKKLGISDM+
Subjt:  SIRVLAKAEVSEAEEWALANAVELGNGK-PSNGSQTSSEKGSKMLLRWPPKKLGISDML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGGACTTGATTTCAGGCTTCTTCTCTTCCATTTTAGGCACCGTCACAGTGAGAATTCCATTCTCCATGCTGGCCTTCACCTCCTCAACTTTGGCATTCTCCGG
CAGCCTGAATCTCCTCATGAACTTTCCACTGCTCCGCTCGATTCTGTGCCACTTGTCGTTCTTCTCCTCCTGCTCTTTGCTTCTCTCTCCACTGATCTGCAGAACTCTTC
CCTCTTCAACCTCCACTTTGACTTCCTCCTTTTTGATCCCTGGAAGATCGGCCTTGAAGACGTGGGCTTGTGGGGTCTCCTTCCAGTCGATTCGAGTGCTGGCAAAAGCA
GAGGTTTCAGAAGCAGAGGAATGGGCGTTGGCCAATGCGGTGGAATTGGGAAATGGGAAGCCCTCGAACGGATCCCAAACATCCAGCGAGAAGGGGTCGAAGATGTTGCT
GCGGTGGCCACCGAAAAAGCTTGGAATCAGCGACATGCTTCTTCAAATT
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGGACTTGATTTCAGGCTTCTTCTCTTCCATTTTAGGCACCGTCACAGTGAGAATTCCATTCTCCATGCTGGCCTTCACCTCCTCAACTTTGGCATTCTCCGG
CAGCCTGAATCTCCTCATGAACTTTCCACTGCTCCGCTCGATTCTGTGCCACTTGTCGTTCTTCTCCTCCTGCTCTTTGCTTCTCTCTCCACTGATCTGCAGAACTCTTC
CCTCTTCAACCTCCACTTTGACTTCCTCCTTTTTGATCCCTGGAAGATCGGCCTTGAAGACGTGGGCTTGTGGGGTCTCCTTCCAGTCGATTCGAGTGCTGGCAAAAGCA
GAGGTTTCAGAAGCAGAGGAATGGGCGTTGGCCAATGCGGTGGAATTGGGAAATGGGAAGCCCTCGAACGGATCCCAAACATCCAGCGAGAAGGGGTCGAAGATGTTGCT
GCGGTGGCCACCGAAAAAGCTTGGAATCAGCGACATGCTTCTTCAAATT
Protein sequenceShow/hide protein sequence
MSMDLISGFFSSILGTVTVRIPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICRTLPSSTSTLTSSFLIPGRSALKTWACGVSFQSIRVLAKA
EVSEAEEWALANAVELGNGKPSNGSQTSSEKGSKMLLRWPPKKLGISDMLLQI