; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017239 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017239
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProline transporter 1
Genome locationscaffold33:884993..885481
RNA-Seq ExpressionMS017239
SyntenyMS017239
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS70261.1 Os01g0136050, partial [Oryza sativa Japonica Group]3.1e-3364.33Show/hide
Query:  MSMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS
        +SM   SGF +S LGTVTV TPFSMLAFT STLAFSGSLN  MN PLLRS  CHLSF SS S L  PLI  TLPSSTSTFTSSFL PGRSALKT   GVS
Subjt:  MSMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGIS
        FQS R LAKA VS +E      A   E   PS GS  S+ KGS  LLR    ++G+S
Subjt:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGIS

CAG1834096.1 unnamed protein product [Musa acuminata subsp. malaccensis]2.6e-3261.39Show/hide
Query:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ
        MDL SGF +  LGTVTV TPFSM AFT STLAFSG  NL  N PLLRS  C +S FSSCS L SPLI RT PSSTST TSSFL PG+SAL T A GVSFQ
Subjt:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDML
        S R  A A+ S     A     E+  G P  GS  S EKGSKM  RR P   G+SD+L
Subjt:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDML

KVI11914.1 hypothetical protein Ccrd_009654, partial [Cynara cardunculus var. scolymus]9.3e-3865.36Show/hide
Query:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQSIRV
        +GFF+S  GTV V TPFS+ AFT S  AFSG+LNLL+NFPLLRS LCH+SF SS S  LSPLIC+ L SSTSTFTSSFLIPGRSALKT A GVSFQS RV
Subjt:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQSIRV

Query:  LAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDM
          KAEVS  E    ++  E+  G   NGS  S   GSKML RRPPK LG+ D+
Subjt:  LAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDM

RWR97332.1 hypothetical protein CKAN_02676000 [Cinnamomum micranthum f. kanehirae]1.5e-3276.11Show/hide
Query:  MSMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS
        MSM L+SGF +  LGTVTV TPFS+ AFTSSTLAFSG+LN L N PLL S  CHLSFFSS S LLSPLI RTLPSS+STFTSSF  PGRSALKTWA GVS
Subjt:  MSMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVS
        FQSI+ L KA+VS
Subjt:  FQSIRVLAKAEVS

VFQ82571.1 unnamed protein product [Cuscuta campestris]1.6e-3765.22Show/hide
Query:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ
        MDL SGFF+S LGTVTV TPFSM AFT S  AFSGS N   N PLLRS  CHLS FSS S LLSPLIC+ LPSSTSTFTSSF  PGRSAL TW  GVSFQ
Subjt:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLR-RPPKMLGISDMLLQ
        SIR  A A+VS      L      ENGNP  GS  S E GS   LR RPPK LGI ++L Q
Subjt:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLR-RPPKMLGISDMLLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KSC0 Uncharacterized protein1.7e-6183.95Show/hide
Query:  MSMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS
        MSMDLISGFFSSILGT+TVRTPFSMLAFTSSTLAFSGSLNLLMNFP LRSILCHLSFFSSCS LLSPLIC+TLPSSTST TSSFLIPGRSALK WACGVS
Subjt:  MSMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDMLLQ
        FQS+RVLAKAEVS AEE ALA   E E G PS GS  S+EKGSK LLRRPPKMLG   M+++
Subjt:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDMLLQ

A0A0P0UXN9 Os01g0136050 protein (Fragment)1.5e-3364.33Show/hide
Query:  MSMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS
        +SM   SGF +S LGTVTV TPFSMLAFT STLAFSGSLN  MN PLLRS  CHLSF SS S L  PLI  TLPSSTSTFTSSFL PGRSALKT   GVS
Subjt:  MSMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVS

Query:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGIS
        FQS R LAKA VS +E      A   E   PS GS  S+ KGS  LLR    ++G+S
Subjt:  FQSIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGIS

A0A103YMN4 Uncharacterized protein (Fragment)4.5e-3865.36Show/hide
Query:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQSIRV
        +GFF+S  GTV V TPFS+ AFT S  AFSG+LNLL+NFPLLRS LCH+SF SS S  LSPLIC+ L SSTSTFTSSFLIPGRSALKT A GVSFQS RV
Subjt:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQSIRV

Query:  LAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDM
          KAEVS  E    ++  E+  G   NGS  S   GSKML RRPPK LG+ D+
Subjt:  LAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDM

A0A484M1B1 Uncharacterized protein7.7e-3865.22Show/hide
Query:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ
        MDL SGFF+S LGTVTV TPFSM AFT S  AFSGS N   N PLLRS  CHLS FSS S LLSPLIC+ LPSSTSTFTSSF  PGRSAL TW  GVSFQ
Subjt:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLR-RPPKMLGISDMLLQ
        SIR  A A+VS      L      ENGNP  GS  S E GS   LR RPPK LGI ++L Q
Subjt:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLR-RPPKMLGISDMLLQ

A0A7C9D9Y3 Uncharacterized protein1.8e-3965.82Show/hide
Query:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ
        M   SGFFSS LGTVTV TPFS+ AFTSS LAFSG  N   N PL RS  CHLSFFSSCS +LSPLI R LPSSTSTFTSSFL PGRS L TWA GVSFQ
Subjt:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQ

Query:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDML
        S  VL   +VS A E         E+ NPSNGS TS E GS  L+ R PK LGISDM+
Subjt:  SIRVLAKAEVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGGACTTGATTTCAGGCTTCTTCTCTTCCATTTTGGGCACTGTCACAGTCAGAACTCCATTCTCCATGCTGGCCTTCACCTCCTCAACTTTGGCATTCTCCGG
CAGCCTGAATCTCCTCATGAACTTTCCACTGCTCCGCTCGATTCTGTGCCACTTGTCGTTCTTCTCCTCCTGCTCTTTCCTTCTCTCCCCACTGATCTGCAGAACTCTTC
CTTCTTCAACCTCCACTTTCACTTCCTCCTTTTTGATCCCTGGAAGATCGGCCTTGAAGACGTGGGCTTGTGGGGTCTCCTTCCAGTCGATTCGAGTGTTGGCAAAAGCA
GAGGTTTCCGAAGCGGAGGAATGGGCGTTGGCCAATGCGGTGGAATTGGAAAATGGGAACCCATCGAACGGATCCCATACATCCAGTGAGAAGGGGTCGAAGATGTTGCT
GCGGCGGCCACCGAAAATGCTTGGAATCAGCGACATGCTTCTTCAAATT
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGGACTTGATTTCAGGCTTCTTCTCTTCCATTTTGGGCACTGTCACAGTCAGAACTCCATTCTCCATGCTGGCCTTCACCTCCTCAACTTTGGCATTCTCCGG
CAGCCTGAATCTCCTCATGAACTTTCCACTGCTCCGCTCGATTCTGTGCCACTTGTCGTTCTTCTCCTCCTGCTCTTTCCTTCTCTCCCCACTGATCTGCAGAACTCTTC
CTTCTTCAACCTCCACTTTCACTTCCTCCTTTTTGATCCCTGGAAGATCGGCCTTGAAGACGTGGGCTTGTGGGGTCTCCTTCCAGTCGATTCGAGTGTTGGCAAAAGCA
GAGGTTTCCGAAGCGGAGGAATGGGCGTTGGCCAATGCGGTGGAATTGGAAAATGGGAACCCATCGAACGGATCCCATACATCCAGTGAGAAGGGGTCGAAGATGTTGCT
GCGGCGGCCACCGAAAATGCTTGGAATCAGCGACATGCTTCTTCAAATT
Protein sequenceShow/hide protein sequence
MSMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSFLLSPLICRTLPSSTSTFTSSFLIPGRSALKTWACGVSFQSIRVLAKA
EVSEAEEWALANAVELENGNPSNGSHTSSEKGSKMLLRRPPKMLGISDMLLQI