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MS017242 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017242
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProline transporter 1
Genome locationscaffold33:891471..891911
RNA-Seq ExpressionMS017242
SyntenyMS017242
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS70261.1 Os01g0136050, partial [Oryza sativa Japonica Group]2.1e-2560.31Show/hide
Query:  ISMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVS
        ISM   SGF +S LGTVTV TPFSMLAFT STLAFSGSLN  MN PLLRS  CHL F SS SLL  P++  TLPSSTST +SSFL PGRSA+KT   GVS
Subjt:  ISMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVS

Query:  FQSMPKAETSPAKEGAMPIEFENGNPSNGSK
        FQS      +      +    E   PS GS+
Subjt:  FQSMPKAETSPAKEGAMPIEFENGNPSNGSK

CAG1834096.1 unnamed protein product [Musa acuminata subsp. malaccensis]9.6e-2653.5Show/hide
Query:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQ
        MDL SGF +  LGTVTV TPFSM AFT STLAFSG  NL  N PLLRS  C +  FSSCS L SP++ RT PSSTST++SSFL PG+SA+ T   GVSFQ
Subjt:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQ

Query:  SMPKAETSPAKEGAMPIEFE----NGNP--------SNGSKMLLRRPPKMLGIRDIV
        S   A  + A  G +  E E     G P          GSKM  RR P   G+ DI+
Subjt:  SMPKAETSPAKEGAMPIEFE----NGNP--------SNGSKMLLRRPPKMLGIRDIV

KVI11914.1 hypothetical protein Ccrd_009654, partial [Cynara cardunculus var. scolymus]1.9e-2958.28Show/hide
Query:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQS---
        +GFF+S  GTV V TPFS+ AFT S  AFSG+LNLL+NFPLLRS LCH+ F SS S  LSP++C+ L SSTST +SSFLIPGRSA+KT   GVSFQS   
Subjt:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQS---

Query:  MPKAETSPAKEGAMPIEFENG--------NPSNGSKMLLRRPPKMLGIRDI
          KAE S   + + P E   G        + +NGSKML RRPPK LG+ DI
Subjt:  MPKAETSPAKEGAMPIEFENG--------NPSNGSKMLLRRPPKMLGIRDI

RWR97332.1 hypothetical protein CKAN_02676000 [Cinnamomum micranthum f. kanehirae]3.3e-2667.26Show/hide
Query:  ISMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVS
        +SM L+SGF +  LGTVTV TPFS+ AFTSSTLAFSG+LN L N PLL S  CHL FFSS SLLLSP++ RTLPSS+ST +SSF  PGRSA+KTW  GVS
Subjt:  ISMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVS

Query:  FQS---MPKAETS
        FQS   + KA+ S
Subjt:  FQS---MPKAETS

VFQ82571.1 unnamed protein product [Cuscuta campestris]2.6e-3158.44Show/hide
Query:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQ
        MDL SGFF+S LGTVTV TPFSM AFT S  AFSGS N   N PLLRS  CHL  FSS SLLLSP++C+ LPSSTST +SSF  PGRSA+ TW  GVSFQ
Subjt:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQ

Query:  SMPKAETSPAKEGAMPIEFENGNPSNGSK---------MLLRRPPKMLGIRDIV
        S+     +    G +   FENGNP  GS+          L  RPPK LGIR+I+
Subjt:  SMPKAETSPAKEGAMPIEFENGNPSNGSK---------MLLRRPPKMLGIRDIV

TrEMBL top hitse value%identityAlignment
A0A0A0KSC0 Uncharacterized protein3.4e-5377.22Show/hide
Query:  ISMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVS
        +SMDLISGFFSSILGT+TVRTPFSMLAFTSSTLAFSGSLNLLMNFP LRSILCHL FFSSCSLLLSP++C+TLPSSTSTL+SSFLIPGRSA+K W CGVS
Subjt:  ISMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVS

Query:  FQSM---PKAETSPAKEGAMPIEFENGNPSNGSKM--------LLRRPPKMLGIRDIV
        FQSM    KAE S A+EGA+  EFE G PS GS+M        LLRRPPKMLG R +V
Subjt:  FQSM---PKAETSPAKEGAMPIEFENGNPSNGSKM--------LLRRPPKMLGIRDIV

A0A103YMN4 Uncharacterized protein (Fragment)9.0e-3058.28Show/hide
Query:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQS---
        +GFF+S  GTV V TPFS+ AFT S  AFSG+LNLL+NFPLLRS LCH+ F SS S  LSP++C+ L SSTST +SSFLIPGRSA+KT   GVSFQS   
Subjt:  SGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQS---

Query:  MPKAETSPAKEGAMPIEFENG--------NPSNGSKMLLRRPPKMLGIRDI
          KAE S   + + P E   G        + +NGSKML RRPPK LG+ DI
Subjt:  MPKAETSPAKEGAMPIEFENG--------NPSNGSKMLLRRPPKMLGIRDI

A0A443Q2S3 Uncharacterized protein1.6e-2667.26Show/hide
Query:  ISMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVS
        +SM L+SGF +  LGTVTV TPFS+ AFTSSTLAFSG+LN L N PLL S  CHL FFSS SLLLSP++ RTLPSS+ST +SSF  PGRSA+KTW  GVS
Subjt:  ISMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVS

Query:  FQS---MPKAETS
        FQS   + KA+ S
Subjt:  FQS---MPKAETS

A0A484M1B1 Uncharacterized protein1.3e-3158.44Show/hide
Query:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQ
        MDL SGFF+S LGTVTV TPFSM AFT S  AFSGS N   N PLLRS  CHL  FSS SLLLSP++C+ LPSSTST +SSF  PGRSA+ TW  GVSFQ
Subjt:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQ

Query:  SMPKAETSPAKEGAMPIEFENGNPSNGSK---------MLLRRPPKMLGIRDIV
        S+     +    G +   FENGNP  GS+          L  RPPK LGIR+I+
Subjt:  SMPKAETSPAKEGAMPIEFENGNPSNGSK---------MLLRRPPKMLGIRDIV

A0A7C9D9Y3 Uncharacterized protein6.9e-3057.32Show/hide
Query:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQ
        M   SGFFSS LGTVTV TPFS+ AFTSS LAFSG  N   N PL RS  CHL FFSSCSL+LSP++ R LPSSTST +SSFL PGRS + TW  GVSFQ
Subjt:  MDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQ

Query:  S---MPKAETSPAKEGAMPIE-FENGNPSNGSK--------MLLRRPPKMLGIRDIV
        S   +   + S A E    +E  E+ NPSNGS+         L+ R PK LGI D+V
Subjt:  S---MPKAETSPAKEGAMPIE-FENGNPSNGSK--------MLLRRPPKMLGIRDIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATCAATGGACTTGATTTCTGGCTTCTTCTCTTCCATTTTAGGCACCGTCACAGTGAGAACTCCATTCTCCATGCTGGCCTTCACCTCCTCAACTTTGGCATTCTCCGG
CAGCCTGAATCTCCTCATGAATTTTCCACTGCTCCGCTCGATTCTGTGCCATTTGTGGTTCTTCTCCTCATGCTCTCTGCTTCTCTCCCCAGTGATGTGCAGAACTCTGC
CCTCTTCAACCTCAACTTTGAGTTCTTCCTTTTTGATCCCTGGGAGATCCGCGGTGAAGACGTGGCCTTGTGGGGTCTCCTTCCAGTCGATGCCAAAAGCAGAGACTTCG
CCGGCGAAGGAAGGGGCAATGCCCATTGAGTTTGAGAACGGAAACCCATCAAATGGGTCGAAGATGTTGCTTCGGCGGCCACCGAAAATGCTTGGAATCAGAGACATCGT
G
mRNA sequenceShow/hide mRNA sequence
ATATCAATGGACTTGATTTCTGGCTTCTTCTCTTCCATTTTAGGCACCGTCACAGTGAGAACTCCATTCTCCATGCTGGCCTTCACCTCCTCAACTTTGGCATTCTCCGG
CAGCCTGAATCTCCTCATGAATTTTCCACTGCTCCGCTCGATTCTGTGCCATTTGTGGTTCTTCTCCTCATGCTCTCTGCTTCTCTCCCCAGTGATGTGCAGAACTCTGC
CCTCTTCAACCTCAACTTTGAGTTCTTCCTTTTTGATCCCTGGGAGATCCGCGGTGAAGACGTGGCCTTGTGGGGTCTCCTTCCAGTCGATGCCAAAAGCAGAGACTTCG
CCGGCGAAGGAAGGGGCAATGCCCATTGAGTTTGAGAACGGAAACCCATCAAATGGGTCGAAGATGTTGCTTCGGCGGCCACCGAAAATGCTTGGAATCAGAGACATCGT
G
Protein sequenceShow/hide protein sequence
ISMDLISGFFSSILGTVTVRTPFSMLAFTSSTLAFSGSLNLLMNFPLLRSILCHLWFFSSCSLLLSPVMCRTLPSSTSTLSSSFLIPGRSAVKTWPCGVSFQSMPKAETS
PAKEGAMPIEFENGNPSNGSKMLLRRPPKMLGIRDIV