; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017245 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017245
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold33:933129..935085
RNA-Seq ExpressionMS017245
SyntenyMS017245
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464896.1 PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis melo]5.3e-12588.49Show/hide
Query:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
        DCI   NK  FR AS  C HNQA QP TS  T ERR+VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAAAKA
Subjt:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA

Query:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
        LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK++FSRMISLY+HHDLQDK+IEIFADMEELGVKPDE
Subjt:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE

Query:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        DTVRR+ RAFQKLGQEENRKMV+KRY C+WKYIHFKGERVRV++DGWDEDD+
Subjt:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

XP_022139301.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia]5.3e-14199.6Show/hide
Query:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
        DCICNFNKLTFRAASFKCSHNQAVQPFTSSPT ERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
Subjt:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA

Query:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
        LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
Subjt:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE

Query:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
Subjt:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

XP_022139303.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Momordica charantia]7.1e-13898.41Show/hide
Query:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
        DCICNFNKLTFRAASFKCSHNQAVQPFTSSPT ERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
Subjt:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA

Query:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
        LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDK   IFADMEELGVKPDE
Subjt:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE

Query:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
Subjt:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

XP_022942519.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita moschata]5.3e-12589.68Show/hide
Query:  CICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
        CI N+NKL FRAAS KC H QA Q  T S T ERRIV KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KA
Subjt:  CICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA

Query:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
        LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQDK+IEIFADMEELGV+PDE
Subjt:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE

Query:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        DTVRRVA AF+KLGQEEN KMV+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Subjt:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

XP_023541595.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo]4.1e-12589.68Show/hide
Query:  CICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
        CI N+NKL FRAAS KC H QA Q  TSS T ERRIV KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KA
Subjt:  CICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA

Query:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
        LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQDK+IEIFADMEELGV+PDE
Subjt:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE

Query:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        DTVRRVA AF+KLGQEEN K+V+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Subjt:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

TrEMBL top hitse value%identityAlignment
A0A1S3CP50 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X12.6e-12588.49Show/hide
Query:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
        DCI   NK  FR AS  C HNQA QP TS  T ERR+VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAAAKA
Subjt:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA

Query:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
        LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK++FSRMISLY+HHDLQDK+IEIFADMEELGVKPDE
Subjt:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE

Query:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        DTVRR+ RAFQKLGQEENRKMV+KRY C+WKYIHFKGERVRV++DGWDEDD+
Subjt:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

A0A5A7UD21 Pentatricopeptide repeat-containing protein2.6e-12588.49Show/hide
Query:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
        DCI   NK  FR AS  C HNQA QP TS  T ERR+VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAAAKA
Subjt:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA

Query:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
        LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK++FSRMISLY+HHDLQDK+IEIFADMEELGVKPDE
Subjt:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE

Query:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        DTVRR+ RAFQKLGQEENRKMV+KRY C+WKYIHFKGERVRV++DGWDEDD+
Subjt:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

A0A6J1CC95 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X12.6e-14199.6Show/hide
Query:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
        DCICNFNKLTFRAASFKCSHNQAVQPFTSSPT ERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
Subjt:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA

Query:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
        LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
Subjt:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE

Query:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
Subjt:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

A0A6J1CFD3 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X23.5e-13898.41Show/hide
Query:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
        DCICNFNKLTFRAASFKCSHNQAVQPFTSSPT ERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
Subjt:  DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA

Query:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
        LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDK   IFADMEELGVKPDE
Subjt:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE

Query:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
Subjt:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

A0A6J1FWG3 pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.6e-12589.68Show/hide
Query:  CICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA
        CI N+NKL FRAAS KC H QA Q  T S T ERRIV KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KA
Subjt:  CICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKA

Query:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE
        LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQDK+IEIFADMEELGV+PDE
Subjt:  LRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDE

Query:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        DTVRRVA AF+KLGQEEN KMV+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Subjt:  DTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic9.5e-9377.93Show/hide
Query:  TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF++L QEENRK++ +RY  ++K
Subjt:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

Q8LG95 Pentatricopeptide repeat-containing protein At4g211905.6e-4546.12Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYGAL+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY SLL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDE

Query:  AESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY-GCKWKYIHFKGERVRVKRDG
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  V + F KL  ++  + + K+Y   +W++ + KG RV+VK   
Subjt:  AESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY-GCKWKYIHFKGERVRVKRDG

Query:  WDEDDE
         +E  E
Subjt:  WDEDDE

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein6.7e-9477.93Show/hide
Query:  TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF++L QEENRK++ +RY  ++K
Subjt:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein6.7e-9477.93Show/hide
Query:  TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF++L QEENRK++ +RY  ++K
Subjt:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein6.7e-9477.93Show/hide
Query:  TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF++L QEENRK++ +RY  ++K
Subjt:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein6.7e-9477.93Show/hide
Query:  TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF++L QEENRK++ +RY  ++K
Subjt:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein4.0e-4646.12Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYGAL+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY SLL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDE

Query:  AESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY-GCKWKYIHFKGERVRVKRDG
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  V + F KL  ++  + + K+Y   +W++ + KG RV+VK   
Subjt:  AESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY-GCKWKYIHFKGERVRVKRDG

Query:  WDEDDE
         +E  E
Subjt:  WDEDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTGCATTTGCAATTTCAACAAATTGACATTTAGAGCCGCTAGTTTCAAGTGTTCCCACAACCAAGCCGTGCAGCCGTTTACTAGTTCCCCCACAACTGAGAGGCGTAT
TGTGAAGAAGGTTGGGAAGGAGGCGCATCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCCCTTAATCTTGTTAGAATTGTCTCCCAATGTCCTAATG
AAAAAGAAGCTGTCTATGGAGCGTTAAATAAGTGGATAGCTTGGGAGACAGAGTTTCCGTTGATTGCGGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGG
AAGCGAGTCATTCAAGTGGCGAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACTCCCTTTTACTGGCATTCGATATGGACAAGAGGGTGGACGA
AGCCGAATCCTTATGGAACATGATTTTGCATACGCATACACGTTCCATCTCTAAGCAGCTATTTTCTAGGATGATCTCTTTGTACGATCATCATGACTTGCAAGATAAGG
TTATCGAGATATTTGCAGACATGGAGGAGTTAGGTGTAAAACCAGATGAAGATACTGTTAGAAGAGTCGCACGTGCCTTTCAGAAATTAGGTCAAGAAGAAAACCGCAAA
ATGGTCCATAAAAGATATGGCTGCAAATGGAAATATATACACTTTAAAGGTGAGAGGGTTAGAGTGAAAAGAGATGGATGGGATGAAGATGATGAA
mRNA sequenceShow/hide mRNA sequence
GATTGCATTTGCAATTTCAACAAATTGACATTTAGAGCCGCTAGTTTCAAGTGTTCCCACAACCAAGCCGTGCAGCCGTTTACTAGTTCCCCCACAACTGAGAGGCGTAT
TGTGAAGAAGGTTGGGAAGGAGGCGCATCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCCCTTAATCTTGTTAGAATTGTCTCCCAATGTCCTAATG
AAAAAGAAGCTGTCTATGGAGCGTTAAATAAGTGGATAGCTTGGGAGACAGAGTTTCCGTTGATTGCGGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGG
AAGCGAGTCATTCAAGTGGCGAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACTCCCTTTTACTGGCATTCGATATGGACAAGAGGGTGGACGA
AGCCGAATCCTTATGGAACATGATTTTGCATACGCATACACGTTCCATCTCTAAGCAGCTATTTTCTAGGATGATCTCTTTGTACGATCATCATGACTTGCAAGATAAGG
TTATCGAGATATTTGCAGACATGGAGGAGTTAGGTGTAAAACCAGATGAAGATACTGTTAGAAGAGTCGCACGTGCCTTTCAGAAATTAGGTCAAGAAGAAAACCGCAAA
ATGGTCCATAAAAGATATGGCTGCAAATGGAAATATATACACTTTAAAGGTGAGAGGGTTAGAGTGAAAAGAGATGGATGGGATGAAGATGATGAA
Protein sequenceShow/hide protein sequence
DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQW
KRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRK
MVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE