; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017247 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017247
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGATA zinc finger domain-containing protein 8-like isoform X2
Genome locationscaffold33:972318..973521
RNA-Seq ExpressionMS017247
SyntenyMS017247
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051570.1 TPRXL protein [Cucumis melo var. makuwa]3.6e-5878.81Show/hide
Query:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS
        ME+KK QVA SSSSSLDH+FGPMDSNSASSTST GYFGS+FPPPVVERERK+DVG++V T  VGNPDNA++NGK GTG A+GKD SSMYQNETM PSYFS
Subjt:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS

Query:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEGMT
        SSI YGGQENYSPRT AS+SH NFKKEGKD++ N  N N  SRGNWW+GMT
Subjt:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEGMT

XP_008464894.1 PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo]5.3e-5778.52Show/hide
Query:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS
        ME+KK QVA SSSSSLDH+FGPMDSNSASSTST GYFGS+FPPPVVERERK+DVG++V T  VGNPDNA++NGK GTG A+GKD SSMYQNETM PSYFS
Subjt:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS

Query:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG
        SSI YGGQENYSPRT AS+SH NFKKEGKD++ N  N N  SRGNWW+G
Subjt:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG

XP_022139159.1 uncharacterized protein LOC111010132 [Momordica charantia]4.7e-7497.3Show/hide
Query:  MENKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSS
        ME KKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVG+R GTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSS
Subjt:  MENKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSS

Query:  SILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG
        SILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNS SRGNWWEG
Subjt:  SILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG

XP_038892195.1 uncharacterized protein LOC120081420 isoform X1 [Benincasa hispida]3.8e-6376.97Show/hide
Query:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS
        MENKK QVA SSSSSLDH+FGP+DSNSASSTST GYFGSIFPPPVVER RK+DVG++V +  +GNPDNAS+NGK GT GA GKD SS+YQNETM PSYFS
Subjt:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS

Query:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEGMTTSMDLLLKDKEMMV
        SSI YGGQENYSPRT AS+SHHNFKKEGKD++ N  N NSVSRGNWW+GMTTSMDLL   +E+++
Subjt:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEGMTTSMDLLLKDKEMMV

XP_038892196.1 uncharacterized protein LOC120081420 isoform X2 [Benincasa hispida]1.1e-5779.19Show/hide
Query:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS
        MENKK QVA SSSSSLDH+FGP+DSNSASSTST GYFGSIFPPPVVER RK+DVG++V +  +GNPDNAS+NGK GT GA GKD SS+YQNETM PSYFS
Subjt:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS

Query:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG
        SSI YGGQENYSPRT AS+SHHNFKKEGKD++ N  N NSVSRGNWW+G
Subjt:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG

TrEMBL top hitse value%identityAlignment
A0A0A0KNZ9 Uncharacterized protein2.8e-5678.38Show/hide
Query:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS
        MENKK QVA SSSSSLDH+FGPMDSNSASSTST GYFGS+FPPPVVERERK+DVG++V    VGNPDNA++NGK GTGGA+GKD SSMYQNETM PSYFS
Subjt:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS

Query:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWE
        SSI YGGQENYSPRT AS+SH NFKKE KD++ N  N N  SRGNWW+
Subjt:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWE

A0A1S4E4X0 uncharacterized protein LOC1035026532.5e-5778.52Show/hide
Query:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS
        ME+KK QVA SSSSSLDH+FGPMDSNSASSTST GYFGS+FPPPVVERERK+DVG++V T  VGNPDNA++NGK GTG A+GKD SSMYQNETM PSYFS
Subjt:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS

Query:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG
        SSI YGGQENYSPRT AS+SH NFKKEGKD++ N  N N  SRGNWW+G
Subjt:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG

A0A5A7U8T9 TPRXL protein1.8e-5878.81Show/hide
Query:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS
        ME+KK QVA SSSSSLDH+FGPMDSNSASSTST GYFGS+FPPPVVERERK+DVG++V T  VGNPDNA++NGK GTG A+GKD SSMYQNETM PSYFS
Subjt:  MENKK-QVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFS

Query:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEGMT
        SSI YGGQENYSPRT AS+SH NFKKEGKD++ N  N N  SRGNWW+GMT
Subjt:  SSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEGMT

A0A6J1CC52 uncharacterized protein LOC1110101322.3e-7497.3Show/hide
Query:  MENKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSS
        ME KKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVG+R GTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSS
Subjt:  MENKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSS

Query:  SILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG
        SILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNS SRGNWWEG
Subjt:  SILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG

A0A6J1K7H1 uncharacterized protein LOC111491851 isoform X14.8e-4874.32Show/hide
Query:  MENKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSS
        MENKKQVAASSSS+ D LFGPMDSNSASSTST GYFGSIFP  VVERE+ QDVG       VGNPD AS+NG NGTGGA GK  SS+Y NETM PSYFSS
Subjt:  MENKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSS

Query:  SILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG
        SI YGGQENYSP TK SESHHN KKE +D++  G N NS SRGNWW+G
Subjt:  SILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39855.1 unknown protein1.4e-1043.59Show/hide
Query:  MENKKQV---AASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSY
        M+ KK V   ++SSSSSLDH+FGP  S+S SS ST G F SIFPPP      + ++  R G      P N     + G   +  K+  S    ET  P  
Subjt:  MENKKQV---AASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSY

Query:  FSSSILYGGQENYSPRT
         SSSI YGGQ+NYS  T
Subjt:  FSSSILYGGQENYSPRT

AT2G39855.2 unknown protein1.6e-1642.38Show/hide
Query:  MENKKQV---AASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSY
        M+ KK V   ++SSSSSLDH+FGP  S+S SS ST G F SIFPPP      + ++  R G      P N     + G   +  K+  S    ET  P  
Subjt:  MENKKQV---AASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSY

Query:  FSSSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG
         SSSI YGGQ+NYS  T   ++   +KK+G++     G+  S SRGNWWEG
Subjt:  FSSSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG

AT3G55646.1 unknown protein3.3e-1740.52Show/hide
Query:  ENKKQVAASSS-----SSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVER-ERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGP
        +NKK++ ++SS     SS DH+FGP  S+S+SS++T G F SIFPPP  ++  R+ D   + G     +P NA     N       K+  S Y  ET  P
Subjt:  ENKKQVAASSS-----SSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVER-ERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGP

Query:  SYFSSSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG
         + SSS+ YGGQE YS  T  + +H  +KK+G++     G+    SRGNWWEG
Subjt:  SYFSSSILYGGQENYSPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG

AT5G05965.1 unknown protein1.4e-1237.75Show/hide
Query:  MENKKQVAASS--SSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYF
        M+ KK  AASS  SSS D+LFGP  S SASS ST     SIFPPPV  ++      +  G  +    + +S                    +E    SY+
Subjt:  MENKKQVAASS--SSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYF

Query:  SSSILYGGQENYS-PRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG
        SSSI YGGQ++YS PRT  S +  + + +  +D  +     S SRGNWW+G
Subjt:  SSSILYGGQENYS-PRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEG

AT5G59080.1 unknown protein5.7e-0931.61Show/hide
Query:  MENKKQVAASSSSSLD---HLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSM-YQNETMGPS
        ME K +V +SSS+S      LFG  D +  SS+S  G F ++FP P                        ++ +G N   G+  +   S+  Q + + P 
Subjt:  MENKKQVAASSSSSLD---HLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSM-YQNETMGPS

Query:  YFSSSILYGGQENYSPRTKASESH---HNFKKEGKDDEVNGGNPNSVSRGNWWEG
        + SSS+ YGGQ+ Y+ R+  ++++    N ++   +D+ NG NP  VSRGNWW+G
Subjt:  YFSSSILYGGQENYSPRTKASESH---HNFKKEGKDDEVNGGNPNSVSRGNWWEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAAGTTTGGATCATCTTTTTGGTCCCATGGACTCAAATTCTGCTTCTTCAACATCCACAGCTGGATATTTTGG
CTCTATTTTCCCACCACCGGTGGTGGAGAGGGAGAGAAAACAGGATGTTGGAGATCGAGTTGGCACTTGCAATGTTGGGAATCCAGATAATGCTTCTTTAAATGGCAAGA
ATGGAACCGGTGGTGCAACTGGGAAAGATGCAAGCTCCATGTATCAGAATGAAACTATGGGACCAAGTTACTTTAGTTCCTCCATCCTTTATGGTGGCCAAGAAAATTAC
TCCCCAAGAACCAAGGCCTCAGAATCCCACCATAATTTTAAAAAAGAAGGGAAAGACGACGAAGTAAACGGAGGCAATCCTAACTCTGTTTCAAGAGGAAACTGGTGGGA
GGGTATGACAACTTCCATGGATTTACTGTTGAAAGACAAAGAGATGATGGTG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAAGTTTGGATCATCTTTTTGGTCCCATGGACTCAAATTCTGCTTCTTCAACATCCACAGCTGGATATTTTGG
CTCTATTTTCCCACCACCGGTGGTGGAGAGGGAGAGAAAACAGGATGTTGGAGATCGAGTTGGCACTTGCAATGTTGGGAATCCAGATAATGCTTCTTTAAATGGCAAGA
ATGGAACCGGTGGTGCAACTGGGAAAGATGCAAGCTCCATGTATCAGAATGAAACTATGGGACCAAGTTACTTTAGTTCCTCCATCCTTTATGGTGGCCAAGAAAATTAC
TCCCCAAGAACCAAGGCCTCAGAATCCCACCATAATTTTAAAAAAGAAGGGAAAGACGACGAAGTAAACGGAGGCAATCCTAACTCTGTTTCAAGAGGAAACTGGTGGGA
GGGTATGACAACTTCCATGGATTTACTGTTGAAAGACAAAGAGATGATGGTG
Protein sequenceShow/hide protein sequence
MENKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGDRVGTCNVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSSSILYGGQENY
SPRTKASESHHNFKKEGKDDEVNGGNPNSVSRGNWWEGMTTSMDLLLKDKEMMV