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MS017271 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017271
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR2
Genome locationscaffold33:1198161..1198361
RNA-Seq ExpressionMS017271
SyntenyMS017271
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF30808.1 conserved hypothetical protein [Ricinus communis]8.3e-0960Show/hide
Query:  CQTPRRRSSRTPVAP-SCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF---AQRPEACA
        C+TP RR  R P AP +CP APRKKPV +K++ PPKDGYFQPPDLE  F    +R  +CA
Subjt:  CQTPRRRSSRTPVAP-SCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF---AQRPEACA
KAE8647993.1 hypothetical protein Csa_021483 [Cucumis sativus]7.7e-1568.18Show/hide
Query:  MAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF---AQRPEAC
        MAEET ++C+TPRRRS R PVA +CP+APRKKPV +KRKAPPK+GYF+ PDLE+LF     R EAC
Subjt:  MAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF---AQRPEAC
KAG6600042.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1576.79Show/hide
Query:  MAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF
        MAEE KD+C+TPRR+S R PVA  CPAAPRKK V +KRKAPPKDGYF+PPDLE+LF
Subjt:  MAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF
KDP44934.1 hypothetical protein JCGZ_01434 [Jatropha curcas]1.7e-0956.06Show/hide
Query:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP----EACA
        E   +VC TPRRR SR P   +CP AP+KK VR K   PP DGYFQPPDLE +F   P    E CA
Subjt:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP----EACA
XP_021655298.1 cyclin-dependent protein kinase inhibitor SMR4-like [Hevea brasiliensis]7.2e-1367.19Show/hide
Query:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF--AQRPEACA
        E   +VC TPRRR SR P A +CP APRKKPV  K+++PPKDGYFQPPDLE LF  A R EACA
Subjt:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF--AQRPEACA
TrEMBL top hitse value%identityAlignment
A0A067LKR5 Uncharacterized protein8.1e-1056.06Show/hide
Query:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP----EACA
        E   +VC TPRRR SR P   +CP AP+KK VR K   PP DGYFQPPDLE +F   P    E CA
Subjt:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP----EACA
A0A0A0KS84 Uncharacterized protein3.7e-1568.18Show/hide
Query:  MAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF---AQRPEAC
        MAEET ++C+TPRRRS R PVA +CP+APRKKPV +KRKAPPK+GYF+ PDLE+LF     R EAC
Subjt:  MAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF---AQRPEAC
A0A1U8A7K0 cyclin-dependent protein kinase inhibitor SMR25.2e-0952.31Show/hide
Query:  MAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP--EAC
        + E  ++ C+TP+ R  R P+A  CP  PRKKP+  K++ PP +GYFQPPDLE+LFA  P  EAC
Subjt:  MAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP--EAC
A0A6A1VY35 Uncharacterized protein4.0e-0949.3Show/hide
Query:  IAAMAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP----EACA
        IA      ++ C TPR   S+ P A +CP AP+K+P  +K+K PPK+GYF PPDLE+ FA+ P    EACA
Subjt:  IAAMAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP----EACA
B9T003 Uncharacterized protein4.0e-0960Show/hide
Query:  CQTPRRRSSRTPVAP-SCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF---AQRPEACA
        C+TP RR  R P AP +CP APRKKPV +K++ PPKDGYFQPPDLE  F    +R  +CA
Subjt:  CQTPRRRSSRTPVAP-SCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILF---AQRPEACA
SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR41.0e-0951.56Show/hide
Query:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP--EACA
        E  ++ C TPR    R PVA  CP  PRKK + ++++ PP++GYFQPPDLE LF  +P  EACA
Subjt:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP--EACA
Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR54.4e-0546.15Show/hide
Query:  CQTPRRRSSRTPVAPSCPAAPRKKPVRM---KRKAPPKDGYFQPPDLEILFA
        C TP R   R P  P CP   R+K   +   K++ PPK GYFQPPDL++ F+
Subjt:  CQTPRRRSSRTPVAPSCPAAPRKKPVRM---KRKAPPKDGYFQPPDLEILFA
Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein8.5e-0444.83Show/hide
Query:  ETKDVC-QTPRRRSSRTPVAPSCPAAPRKKPVRMK-RKAPPKDGYFQPPDLEILFAQR
        E +D C  TP   S R P  P CPAAP+K+   +K         YF PPDLE +F QR
Subjt:  ETKDVC-QTPRRRSSRTPVAPSCPAAPRKKPVRMK-RKAPPKDGYFQPPDLEILFAQR
AT3G27630.1 unknown protein3.8e-0443.1Show/hide
Query:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPP-DLEILFAQR
        E    +C TP  R ++T   P CPAAPRK+P  +K +   +  YF PP D E++F QR
Subjt:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPP-DLEILFAQR
AT5G02220.1 unknown protein7.2e-1151.56Show/hide
Query:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP--EACA
        E  ++ C TPR    R PVA  CP  PRKK + ++++ PP++GYFQPPDLE LF  +P  EACA
Subjt:  EETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRP--EACA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCGCAGCCATGGCGGAGGAGACGAAGGATGTTTGCCAGACACCGCGACGGAGAAGCTCTCGGACTCCGGTGGCTCCGTCGTGCCCGGCGGCGCCGAGGAAGAAGCCGGT
TCGTATGAAACGGAAGGCTCCGCCGAAGGACGGGTACTTTCAGCCGCCGGATCTGGAGATTTTATTTGCTCAGAGACCAGAAGCTTGTGCT
mRNA sequenceShow/hide mRNA sequence
ATCGCAGCCATGGCGGAGGAGACGAAGGATGTTTGCCAGACACCGCGACGGAGAAGCTCTCGGACTCCGGTGGCTCCGTCGTGCCCGGCGGCGCCGAGGAAGAAGCCGGT
TCGTATGAAACGGAAGGCTCCGCCGAAGGACGGGTACTTTCAGCCGCCGGATCTGGAGATTTTATTTGCTCAGAGACCAGAAGCTTGTGCT
Protein sequenceShow/hide protein sequence
IAAMAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRPEACA