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MS017294 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017294
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger protein ZAT12-like
Genome locationscaffold33:1421326..1421553
RNA-Seq ExpressionMS017294
SyntenyMS017294
Gene Ontology termsGO:0010200 - response to chitin (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601010.1 Zinc finger protein ZAT11, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3493.59Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGS--QGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT
        VFECKTCNRQFPSFQALGGHRASHKKPRIVG DGGNS+GS  QGSP KPKTHECSICGLEFAIGQALGGHMRRHRATT
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGS--QGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT

KAG7031623.1 Zinc finger protein ZAT11, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3493.59Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT
        VFECKTCNRQFPSFQALGGHRASHKKPRIVG DGGNS+G  SQGSP KPKTHECSICGLEFAIGQALGGHMRRHRATT
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT

XP_022957121.1 zinc finger protein ZAT12-like [Cucurbita moschata]2.2e-3493.59Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT
        VFECKTCNRQFPSFQALGGHRASHKKPRIVG DGGNS+G  SQGSP KPKTHECSICGLEFAIGQALGGHMRRHRATT
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT

XP_022995602.1 zinc finger protein ZAT12-like [Cucurbita maxima]2.2e-3493.59Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT
        VFECKTCNRQFPSFQALGGHRASHKKPRIVG DGGNS+G  SQGSP KPKTHECSICGLEFAIGQALGGHMRRHRATT
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT

XP_023545353.1 zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo]2.2e-3493.59Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT
        VFECKTCNRQFPSFQALGGHRASHKKPRIVG DGGNS+G  SQGSP KPKTHECSICGLEFAIGQALGGHMRRHRATT
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT

TrEMBL top hitse value%identityAlignment
A0A0A0KLU2 Uncharacterized protein7.0e-3492.31Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT
        VFECKTCNRQF SFQALGGHRASHKKPRIVG DGGNS+G  SQGSP KPKTHECSICGLEFAIGQALGGHMRRHRATT
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT

A0A1S3CF73 zinc finger protein ZAT12-like7.0e-3492.31Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT
        VFECKTCNRQF SFQALGGHRASHKKPRIVG DGGNS+G  SQGSP KPKTHECSICGLEFAIGQALGGHMRRHRATT
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT

A0A5D3CS99 Zinc finger protein ZAT12-like7.0e-3492.31Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT
        VFECKTCNRQF SFQALGGHRASHKKPRIVG DGGNS+G  SQGSP KPKTHECSICGLEFAIGQALGGHMRRHRATT
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT

A0A6J1GYC8 zinc finger protein ZAT12-like1.1e-3493.59Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT
        VFECKTCNRQFPSFQALGGHRASHKKPRIVG DGGNS+G  SQGSP KPKTHECSICGLEFAIGQALGGHMRRHRATT
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT

A0A6J1JZD8 zinc finger protein ZAT12-like1.1e-3493.59Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT
        VFECKTCNRQFPSFQALGGHRASHKKPRIVG DGGNS+G  SQGSP KPKTHECSICGLEFAIGQALGGHMRRHRATT
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEG--SQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT

SwissProt top hitse value%identityAlignment
Q42410 Zinc finger protein ZAT122.3e-1864Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKT--HECSICGLEFAIGQALGGHMRRHR
        VF CKTC +QF SFQALGGHRASHKKP        N   S G   K KT  H C ICG+EF +GQALGGHMRRHR
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKT--HECSICGLEFAIGQALGGHMRRHR

Q42453 Zinc finger protein ZAT71.8e-1858.9Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHR
        VF CKTC ++F SFQALGGHRASHKK  ++ SD  +  GS  +     +H C ICG++F +GQALGGHMRRHR
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHR

Q681X4 Zinc finger protein ZAT51.8e-1853Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRI----------------VGSDGGNSE--------GSQGSPM---KPKTHECSICGLEFAIGQALGGHMRRHR
        V+ECKTCNR F SFQALGGHRASHKKPR                    +G NS          SQ S +     K HECSICG EF  GQALGGHMRRHR
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRI----------------VGSDGGNSE--------GSQGSPM---KPKTHECSICGLEFAIGQALGGHMRRHR

Q9LFG0 Zinc finger protein ZAT182.6e-1755.41Show/hide
Query:  FECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRAT
        FECKTCNR+F SFQALGGHRASHKKP+++         ++ + M    H+C+IC   F  GQALGGHMR+HR +
Subjt:  FECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRAT

Q9LX85 Zinc finger protein ZAT82.6e-1761.04Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKT---HECSICGLEFAIGQALGGHMRRHRA
        VF CKTC ++F SFQALGGHRASHKK  ++ S   +  GS  S  K KT   H C ICG+EF +GQALGGHMRRHR+
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKT---HECSICGLEFAIGQALGGHMRRHRA

Arabidopsis top hitse value%identityAlignment
AT2G28200.1 C2H2-type zinc finger family protein1.3e-1953Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRI----------------VGSDGGNSE--------GSQGSPM---KPKTHECSICGLEFAIGQALGGHMRRHR
        V+ECKTCNR F SFQALGGHRASHKKPR                    +G NS          SQ S +     K HECSICG EF  GQALGGHMRRHR
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRI----------------VGSDGGNSE--------GSQGSPM---KPKTHECSICGLEFAIGQALGGHMRRHR

AT2G28710.1 C2H2-type zinc finger family protein1.1e-2060.27Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHR
        VF CKTCN++FPSFQALGGHRASH++   +      S       +KP  HEC ICG EFA+GQALGGHMR+HR
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHR

AT3G46090.1 C2H2 and C2HC zinc fingers superfamily protein1.3e-1958.9Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHR
        VF CKTC ++F SFQALGGHRASHKK  ++ SD  +  GS  +     +H C ICG++F +GQALGGHMRRHR
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHR

AT5G03510.1 C2H2-type zinc finger family protein2.8e-1948.04Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRI----------------------VGSDGG----NSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRA
        V++CKTC++ F SFQALGGHRASHKKP++                       G+ G         S GS    KTHECSIC  EF+ GQALGGHMRRHR 
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRI----------------------VGSDGG----NSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRA

Query:  TT
         T
Subjt:  TT

AT5G59820.1 C2H2-type zinc finger family protein1.6e-1964Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKT--HECSICGLEFAIGQALGGHMRRHR
        VF CKTC +QF SFQALGGHRASHKKP        N   S G   K KT  H C ICG+EF +GQALGGHMRRHR
Subjt:  VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKT--HECSICGLEFAIGQALGGHMRRHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCTTCGAGTGCAAGACGTGCAATCGGCAATTTCCGTCGTTTCAGGCGCTCGGCGGCCACCGTGCGAGCCACAAGAAGCCGCGGATTGTCGGATCGGACGGCGGAAACTC
CGAAGGATCGCAAGGATCTCCGATGAAGCCGAAGACGCACGAGTGTAGTATCTGCGGGTTGGAGTTCGCGATAGGGCAAGCGCTCGGAGGACATATGAGGAGACATAGAG
CGACGACG
mRNA sequenceShow/hide mRNA sequence
GTCTTCGAGTGCAAGACGTGCAATCGGCAATTTCCGTCGTTTCAGGCGCTCGGCGGCCACCGTGCGAGCCACAAGAAGCCGCGGATTGTCGGATCGGACGGCGGAAACTC
CGAAGGATCGCAAGGATCTCCGATGAAGCCGAAGACGCACGAGTGTAGTATCTGCGGGTTGGAGTTCGCGATAGGGCAAGCGCTCGGAGGACATATGAGGAGACATAGAG
CGACGACG
Protein sequenceShow/hide protein sequence
VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT