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MS017309 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017309
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF674)
Genome locationscaffold33:1492573..1493090
RNA-Seq ExpressionMS017309
SyntenyMS017309
Gene Ontology termsNA
InterPro domainsIPR007750 - Protein of unknown function DUF674


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7132017.1 hypothetical protein RHSIM_Rhsim09G0162200 [Rhododendron simsii]7.7e-3546.81Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS
        VS+KL+ID   KR+L+AEA K F+DFLF LL LPVGT VRLL+ + MVG LG+LY S++ LN  Y +P+Q K ++L PK P++++Q+  LL ++ S+SA+
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS

Query:  KTYYC------------YYYCWQN----CPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN
        KTYY             ++Y   N    CPGC + +   ++YV    E     E G+VKG+V YMVMDDL V PM ++S I++LN FN
Subjt:  KTYYC------------YYYCWQN----CPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN

KAG5533328.1 hypothetical protein RHGRI_027503 [Rhododendron griersonianum]2.2e-3449.19Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLL---SSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSS
        V+LKL+ID   +++L+AEA+K F+DFLF LL LPVGT VRLL   S + MVG LG LY S+  L+  YF P+Q KD++L PKAP++++Q+  LL ++  +
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLL---SSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSS

Query:  SASKTYY-CYY-----YCWQN----CPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN
        S +K YY C Y     Y   N    CP C+  M R  +YV  A E  +A E G+VKGMV YMVMDDL V P+ ++S+I++LN FN
Subjt:  SASKTYY-CYY-----YCWQN----CPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN

KAG5533335.1 hypothetical protein RHGRI_027510 [Rhododendron griersonianum]3.1e-3648.9Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS
        VSLKL+ID   KR+L+AEA K F+DFLF LL LPVGT VRLL+ + MVG LG+LY S++ L+  YF+P+Q K ++L PKAP++++Q+  LL ++  +SA+
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS

Query:  KTYYCYYYCWQN----------CPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN
        K YY   Y + +          CP C+  + R V+YV  A E  +  E G +KG+V YMVMDDL V PM ++S IS+LN FN
Subjt:  KTYYCYYYCWQN----------CPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN

PWA84187.1 hypothetical protein CTI12_AA161430 [Artemisia annua]1.0e-3446.96Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS
        V+LKL+ID   K++L+AEA+K+F+DFLF +L+LPVGTV +LL    MVG LG+LY S++ L+  Y + D  K+ +LNPK  +   Q+  LL  + +  A 
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS

Query:  KTYYCYYYC--------WQNCPGCHAYMCRIVEYVHGAGEARSAVE-EGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN
        K Y CY YC           CP C   M  ++ YV G G  + AVE  G+VKG+V YMVMDDL VKPM ++S+I++LN FN
Subjt:  KTYYCYYYC--------WQNCPGCHAYMCRIVEYVHGAGEARSAVE-EGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN

XP_023904760.1 uncharacterized protein LOC112016428 [Quercus suber]5.9e-3548.6Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS
        VSLKL+ID  G ++L+AEA K F+DFLF LL+LPVGTV RLL+   MVG LG+LY SV+ L+  Y +P+Q KD +L PK PI++S +  LL  + +    
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS

Query:  KTYYCYYYCWQ-------NCPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN
        K Y C  +           CP C+ YM   + Y+  A EA S  E GYVKG+V YMVMDDL VKPM ++S+I++L  F+
Subjt:  KTYYCYYYCWQ-------NCPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN

TrEMBL top hitse value%identityAlignment
A0A2U1PEV0 Uncharacterized protein4.9e-3546.96Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS
        V+LKL+ID   K++L+AEA+K+F+DFLF +L+LPVGTV +LL    MVG LG+LY S++ L+  Y + D  K+ +LNPK  +   Q+  LL  + +  A 
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS

Query:  KTYYCYYYC--------WQNCPGCHAYMCRIVEYVHGAGEARSAVE-EGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN
        K Y CY YC           CP C   M  ++ YV G G  + AVE  G+VKG+V YMVMDDL VKPM ++S+I++LN FN
Subjt:  KTYYCYYYC--------WQNCPGCHAYMCRIVEYVHGAGEARSAVE-EGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN

A0A5E4EBV9 PREDICTED: DUF6745.4e-3448.62Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS
        VS+KL++D    ++L+AEA K  +DFLFTLL+LPVGTV RLLS +GMVG LG LY SV+ L+  Y +P+ +K+ LL PKA +  + I  LL  +  S+A 
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS

Query:  KTYYCYYYCWQN--------CPGC-HAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN
        K Y C Y   ++        CP C H +M   V YV  A       E GYVKG+V YMVMDDL VKPM ++S+I++LN FN
Subjt:  KTYYCYYYCWQN--------CPGC-HAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN

A0A5E4EBY0 PREDICTED: DUF6745.4e-3448.62Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS
        VS+KL++D    ++L+AEA K  +DFLFTLL+LPVGTV RLLS +GMVG LG LY SV+ L+  Y +P+ +K+ LL PKA +  + I  LL  +  S+A 
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS

Query:  KTYYCYYYCWQN--------CPGC-HAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN
        K Y C Y   ++        CP C H +M   V YV  A       E GYVKG+V YMVMDDL VKPM ++S+I++LN FN
Subjt:  KTYYCYYYCWQN--------CPGC-HAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN

A0A5E4GKN1 PREDICTED: DUF6745.4e-3448.62Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS
        VS+KL++D    ++L+AEA K  +DFLFTLL+LPVGTV RLLS +GMVG LG LY SV+ L+  Y +P+ +K+ LL PKA +  + I  LL  +  S+A 
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS

Query:  KTYYCYYYCWQN--------CPGC-HAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN
        K Y C Y   ++        CP C H +M   V YV  A       E GYVKG+V YMVMDDL VKPM ++S+I++LN FN
Subjt:  KTYYCYYYCWQN--------CPGC-HAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN

M5X812 Uncharacterized protein5.4e-3448.62Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS
        VS+KL++D    ++L+AEA K  +DFLFTLL+LPVGTV RLLS +GMVG LG LY SV+ L+  Y +P+ +K+ LL PKA +  + I  LL  +  S+A 
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS

Query:  KTYYCYYYCWQN--------CPGC-HAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN
        K Y C Y   ++        CP C H +M   V YV  A       E GYVKG+V YMVMDDL VKPM ++S+I++LN FN
Subjt:  KTYYCYYYCWQN--------CPGC-HAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09110.1 Protein of unknown function (DUF674)1.8e-1031.35Show/hide
Query:  SLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLLS-----SEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESS
        SL+L+ID+   R++ AEA K F+D L +LL LP+GT VRLL         +VG L +LY+SV  ++ + FE    K  LL+P++   S      L I+  
Subjt:  SLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLLS-----SEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESS

Query:  SSASKTYYCYYY-----CWQNCPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGM-----VKYMVMDDLTVKPMCSMSTISVLNHF
        + A+K + C  +     C +         CR    +H        VEE    G+       +++ DDL V        ++VLN F
Subjt:  SSASKTYYCYYY-----CWQNCPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGM-----VKYMVMDDLTVKPMCSMSTISVLNHF

AT3G09120.1 Protein of unknown function (DUF674)8.6e-0826.49Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSE----GMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESS
        +SLKL++D+   +++ AEA + F+D LF LL  P+GT+ RLL        ++G   +L RSV  +  + F+ +  K  LL+PK+ +        L I+ +
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTV-RLLSSE----GMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESS

Query:  ------------SSASKTYYCYYYCWQNCPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLN
                     S S  Y  +Y    +C     Y   + E         +A +  +V     +++ DDL V        + VLN
Subjt:  ------------SSASKTYYCYYYCWQNCPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLN

AT5G01120.1 Protein of unknown function (DUF674)1.6e-0927.42Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLL-----SSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIES
        ++LKL+ID+   ++++AEA   F+D LF+   LP+GT VRLL     S    +G   ++Y SV  +   +F     K  LL P +          L+I+ 
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLL-----SSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIES

Query:  SSSASKTYYC------------YYYCWQNCPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGM-VKYMVMDDLTVKPMCSMSTISVL
         S A+K + C            Y     +   C  +M  ++++    G    +  E +V+G    +++ DDL V+     ST++VL
Subjt:  SSSASKTYYC------------YYYCWQNCPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGM-VKYMVMDDLTVKPMCSMSTISVL

AT5G01130.1 Protein of unknown function (DUF674)1.2e-0943.53Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLL-----SSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKA
        VSL+L ID+   +++ AEA K F+D LF+LL LP+GT +RLL     S    VG   +LYRSV  +  + F+ D  K  LL+P++
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGT-VRLL-----SSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKA

AT5G01140.1 Protein of unknown function (DUF674)5.0e-0827.27Show/hide
Query:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTVRLLSSEGM-VGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS
        +++  ++ K   +ILY E  + F+D LFT LA+P+ ++  +S   + +G +G+L+RS   L+      D    +      P        LL+I + +   
Subjt:  VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTVRLLSSEGM-VGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSAS

Query:  KTYYCYYYCWQNCPGCHAYMCRIVE---YVHGAGE--ARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHF
           +CY          +    R  +   +V    +   RS   +G+VK   K++V DDL V P  S ST SVL  F
Subjt:  KTYYCYYYCWQNCPGCHAYMCRIVE---YVHGAGE--ARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGAGTTTGAAGCTGGTGATAGACAAAAATGGGAAGAGAATTCTATACGCCGAAGCCGACAAGAAATTCATAGACTTCCTCTTCACACTACTTGCTCTTCCTGTGGGAAC
CGTTAGGCTTCTGTCCAGCGAAGGCATGGTTGGCCCCCTCGGCAGTCTCTACCGCAGCGTGGATGGCTTGAATGCCAACTATTTTGAGCCAGACCAGCACAAAGACAACC
TTCTAAACCCCAAGGCTCCAATCACTAGTTCTCAAATTGGAACCCTCTTGCAAATCGAATCTTCTTCTTCCGCATCAAAGACCTACTACTGTTACTACTACTGTTGGCAG
AATTGCCCCGGATGCCATGCTTATATGTGCAGGATTGTAGAATATGTGCATGGAGCTGGTGAAGCAAGATCAGCAGTGGAGGAAGGTTACGTGAAAGGGATGGTTAAATA
CATGGTGATGGATGATCTTACCGTCAAGCCCATGTGTTCCATGTCCACTATTTCGGTGTTGAATCACTTCAAC
mRNA sequenceShow/hide mRNA sequence
GTGAGTTTGAAGCTGGTGATAGACAAAAATGGGAAGAGAATTCTATACGCCGAAGCCGACAAGAAATTCATAGACTTCCTCTTCACACTACTTGCTCTTCCTGTGGGAAC
CGTTAGGCTTCTGTCCAGCGAAGGCATGGTTGGCCCCCTCGGCAGTCTCTACCGCAGCGTGGATGGCTTGAATGCCAACTATTTTGAGCCAGACCAGCACAAAGACAACC
TTCTAAACCCCAAGGCTCCAATCACTAGTTCTCAAATTGGAACCCTCTTGCAAATCGAATCTTCTTCTTCCGCATCAAAGACCTACTACTGTTACTACTACTGTTGGCAG
AATTGCCCCGGATGCCATGCTTATATGTGCAGGATTGTAGAATATGTGCATGGAGCTGGTGAAGCAAGATCAGCAGTGGAGGAAGGTTACGTGAAAGGGATGGTTAAATA
CATGGTGATGGATGATCTTACCGTCAAGCCCATGTGTTCCATGTCCACTATTTCGGTGTTGAATCACTTCAAC
Protein sequenceShow/hide protein sequence
VSLKLVIDKNGKRILYAEADKKFIDFLFTLLALPVGTVRLLSSEGMVGPLGSLYRSVDGLNANYFEPDQHKDNLLNPKAPITSSQIGTLLQIESSSSASKTYYCYYYCWQ
NCPGCHAYMCRIVEYVHGAGEARSAVEEGYVKGMVKYMVMDDLTVKPMCSMSTISVLNHFN