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MS017318 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017318
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlant protein 1589 of unknown function
Genome locationscaffold33:1567241..1567750
RNA-Seq ExpressionMS017318
SyntenyMS017318
Gene Ontology termsGO:0032502 - developmental process (biological process)
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147706.1 uncharacterized protein LOC101203417 [Cucumis sativus]3.1e-3890.22Show/hide
Query:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD
        MADSSAAYIHMVQHLIEKCLIFHMNKDEC+EALSKHANISPIITSTVWKELEKENREFFEAY+E + +NDRILAEEETR+LIQRM+SK SDD
Subjt:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD

XP_008461625.1 PREDICTED: uncharacterized protein LOC103500185 [Cucumis melo]2.9e-3687.1Show/hide
Query:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQR-MISKDSDD
        MADSSAAYIHMVQHLIEKCLIFHMNKDEC+EALSKHANISP+ITSTVWKELEKENREFFEAY+E + +NDRILAEEETR+LIQR M+SK SD+
Subjt:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQR-MISKDSDD

XP_022139201.1 uncharacterized protein LOC111010170 [Momordica charantia]6.0e-4297.83Show/hide
Query:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD
        MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAY ESRNKNDRILAEEETRQLI+RMISKDSDD
Subjt:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD

XP_022957149.1 uncharacterized protein LOC111458619 [Cucurbita moschata]6.4e-3685.87Show/hide
Query:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD
        MADSSAAYIHMVQ+LIE CLIFHMNK+EC+EALSK+ANI+PIIT TVWKELEKENREFFEAY ESR++NDRILAEEETRQLIQRM+SK +DD
Subjt:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD

XP_038893010.1 uncharacterized protein LOC120081903 [Benincasa hispida]4.0e-3890.22Show/hide
Query:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD
        MADSSAAYIHMVQHLI+KCLIFHMNK+EC+EALSKHANISPIITSTVWKELEKENREFFEAY+ES  +NDRILAEEETRQLIQRM+SK SDD
Subjt:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD

TrEMBL top hitse value%identityAlignment
A0A0A0KQ71 Uncharacterized protein1.5e-3890.22Show/hide
Query:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD
        MADSSAAYIHMVQHLIEKCLIFHMNKDEC+EALSKHANISPIITSTVWKELEKENREFFEAY+E + +NDRILAEEETR+LIQRM+SK SDD
Subjt:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD

A0A1S3CGF7 uncharacterized protein LOC1035001851.4e-3687.1Show/hide
Query:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQR-MISKDSDD
        MADSSAAYIHMVQHLIEKCLIFHMNKDEC+EALSKHANISP+ITSTVWKELEKENREFFEAY+E + +NDRILAEEETR+LIQR M+SK SD+
Subjt:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQR-MISKDSDD

A0A5A7V1X1 Uncharacterized protein1.4e-3687.1Show/hide
Query:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQR-MISKDSDD
        MADSSAAYIHMVQHLIEKCLIFHMNKDEC+EALSKHANISP+ITSTVWKELEKENREFFEAY+E + +NDRILAEEETR+LIQR M+SK SD+
Subjt:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQR-MISKDSDD

A0A6J1CBZ2 uncharacterized protein LOC1110101704.9e-4297.83Show/hide
Query:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD
        MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAY ESRNKNDRILAEEETRQLI+RMISKDSDD
Subjt:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD

A0A6J1H147 uncharacterized protein LOC1114586193.1e-3685.87Show/hide
Query:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD
        MADSSAAYIHMVQ+LIE CLIFHMNK+EC+EALSK+ANI+PIIT TVWKELEKENREFFEAY ESR++NDRILAEEETRQLIQRM+SK +DD
Subjt:  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.2 Plant protein 1589 of unknown function5.1e-1553.57Show/hide
Query:  AYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAY
        +YI MVQH+IE+C++  M +DEC++AL  HA+I P++T TVW+ L++EN++FFE Y
Subjt:  AYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAY

AT1G10657.3 Plant protein 1589 of unknown function5.1e-1553.57Show/hide
Query:  AYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAY
        +YI MVQH+IE+C++  M +DEC++AL  HA+I P++T TVW+ L++EN++FFE Y
Subjt:  AYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAY

AT3G28990.1 Plant protein 1589 of unknown function1.6e-2464.29Show/hide
Query:  SSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMIS
        S A YIH+VQH+IE CL F+M+K+ECMEALS++ANI+PIITSTVWKEL KEN++FFE Y +   K +  ++EEET QLIQ +IS
Subjt:  SSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMIS

AT3G55240.1 Plant protein 1589 of unknown function7.8e-3270.83Show/hide
Query:  MAD-SSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMI---SKDSDD
        MAD SSA+YIHMVQH+IEKCLIFHM+K+EC+EALSKHANI+P+ITSTVWKELEKEN+EFF+AY E ++K ++ ++EEET Q+IQ++I   SK+SDD
Subjt:  MAD-SSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMI---SKDSDD

AT5G02580.1 Plant protein 1589 of unknown function1.7e-2360Show/hide
Query:  SSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISK
        S A+YIH+V HLIE+C++F+M K+ECM+AL KHANI PIITSTVWKEL KEN+EFFEAY   R   + I  E+ET + I+ ++S+
Subjt:  SSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTCTTCTGCTGCTTACATTCATATGGTGCAACATTTGATCGAGAAGTGTTTGATATTCCATATGAATAAAGATGAGTGCATGGAAGCTCTCTCGAAACATGC
TAACATCAGTCCGATAATCACCTCCACTGTGTGGAAGGAATTGGAGAAAGAAAACAGAGAGTTCTTTGAAGCTTATACAGAGTCACGAAACAAAAACGATAGAATATTGG
CCGAAGAAGAGACAAGACAATTGATCCAAAGGATGATCTCTAAAGATTCTGACGAC
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATTCTTCTGCTGCTTACATTCATATGGTGCAACATTTGATCGAGAAGTGTTTGATATTCCATATGAATAAAGATGAGTGCATGGAAGCTCTCTCGAAACATGC
TAACATCAGTCCGATAATCACCTCCACTGTGTGGAAGGAATTGGAGAAAGAAAACAGAGAGTTCTTTGAAGCTTATACAGAGTCACGAAACAAAAACGATAGAATATTGG
CCGAAGAAGAGACAAGACAATTGATCCAAAGGATGATCTCTAAAGATTCTGACGAC
Protein sequenceShow/hide protein sequence
MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFEAYTESRNKNDRILAEEETRQLIQRMISKDSDD